mlsanityData to 7 Oct 2026

Self-MedRAG: a Self-Reflective Hybrid Retrieval-Augmented Generation Framework for Reliable Medical Question Answering

arXiv 2601.04531 ↗First posted 8 Jan 2026cs.IR cs.AIcited by 0

On the map: Retrieval-augmented generation → Medical and biomedical RAG

Abstract (arXiv)

Large Language Models (LLMs) have demonstrated significant potential in medical Question Answering (QA), yet they remain prone to hallucinations and ungrounded reasoning, limiting their reliability in high-stakes clinical scenarios. While Retrieval-Augmented Generation (RAG) mitigates these issues by incorporating external knowledge, conventional single-shot retrieval often fails to resolve complex biomedical queries requiring multi-step inference. To address this, we propose Self-MedRAG, a self-reflective hybrid framework designed to mimic the iterative hypothesis-verification process of clinical reasoning. Self-MedRAG integrates a hybrid retrieval strategy, combining sparse (BM25) and dense (Contriever) retrievers via Reciprocal Rank Fusion (RRF) to maximize evidence coverage. It employs a generator to produce answers with supporting rationales, which are then assessed by a lightweight self-reflection module using Natural Language Inference (NLI) or LLM-based verification. If the rationale lacks sufficient evidentiary support, the system autonomously reformulates the query and iterates to refine the context. We evaluated Self-MedRAG on the MedQA and PubMedQA benchmarks. The results demonstrate that our hybrid retrieval approach significantly outperforms single-retriever baselines. Furthermore, the inclusion of the self-reflective loop yielded substantial gains, increasing accuracy on MedQA from 80.00% to 83.33% and on PubMedQA from 69.10% to 79.82%. These findings confirm that integrating hybrid retrieval with iterative, evidence-based self-reflection effectively reduces unsupported claims and enhances the clinical reliability of LLM-based systems.

Key facts. No citing papers in the map yet (data through 7 Oct 2026). Placed in Medical and biomedical RAG, one of 15 directions in Retrieval-augmented generation. Builds on 29 of its 39 references that are in the map. First posted on arXiv 8 Jan 2026.

Builds on

29 of 39 references.

Closest ancestors · 5

Same direction, newest first

  1. 2025Talk Before You Retrieve: Agent-Led Discussions for Better RAG in Medical QA30 Apr
  2. 2025The Multi-Round Diagnostic RAG Framework for Emulating Clinical Reasoning10 Apr
  3. 2025MedRAG: Enhancing Retrieval-augmented Generation with Knowledge Graph-Elicited Reasoning for Healthcare Copilot6 Feb
  4. 2024Improving Retrieval-Augmented Generation in Medicine with Iterative Follow-up Questions1 Aug
  5. 2024Benchmarking Retrieval-Augmented Generation for Medicine20 Feb

Other references · 24

  1. 2020Measuring Massive Multitask Language Understandingcited by 7,768
  2. 2023Retrieval-Augmented Generation for Large Language Models: A Surveycited by 2,185
  3. 2021SimCSE: Simple Contrastive Learning of Sentence Embeddingscited by 2,168
  4. 2019BioBERT: a pre-trained biomedical language representation model for biomedical text miningcited by 1,935
  5. 2022Large Language Models Encode Clinical Knowledgecited by 1,807
  6. 2023Self-RAG: Learning to Retrieve, Generate, and Critique through Self-Reflectioncited by 1,800
  7. 2020What Disease does this Patient Have? A Large-scale Open Domain Question Answering Dataset from Medical Examscited by 1,324
  8. 2019PubMedQA: A Dataset for Biomedical Research Question Answeringcited by 1,271
  9. 2021Unsupervised Dense Information Retrieval with Contrastive Learningcited by 1,203
  10. 2024M3-Embedding: Multi-Linguality, Multi-Functionality, Multi-Granularity Text Embeddings Through Self-Knowledge Distillationcited by 1,050
  11. 2020Domain-Specific Language Model Pretraining for Biomedical Natural Language Processingcited by 996
  12. 2025Agentic Retrieval-Augmented Generation: A Survey on Agentic RAGcited by 242
12 more
  1. 2024Corrective Retrieval Augmented Generationcited by 187
  2. 2023MedCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrievalcited by 182
  3. 2024Retrieval-Augmented Generation with Graphs (GraphRAG)cited by 170
  4. 2024A Comprehensive Survey of Retrieval-Augmented Generation (RAG): Evolution, Current Landscape and Future Directionscited by 69
  5. 2025Towards Agentic RAG with Deep Reasoning: A Survey of RAG-Reasoning Systems in LLMscited by 40
  6. 2024Large Language Models for Medicine: A Surveycited by 38
  7. 2024LLM-MedQA: Enhancing Medical Question Answering through Case Studies in Large Language Modelscited by 31
  8. 2025Knowing You Don't Know: Learning When to Continue Search in Multi-round RAG through Self-Practicingcited by 24
  9. 2025A Survey on Retrieval And Structuring Augmented Generation with Large Language Modelscited by 8
  10. 2024BMX: Entropy-weighted Similarity and Semantic-enhanced Lexical Searchcited by 7
  11. 2025Balancing the Blend: An Experimental Analysis of Trade-offs in Hybrid Searchcited by 4
  12. 2025Beyond Retrieval: Ensembling Cross-Encoders and GPT Rerankers with LLMs for Biomedical QAcited by 2

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  1. 2024Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models
  2. 2026A Systematic Study of Retrieval Pipeline Design for Retrieval-Augmented Medical Question Answering
  3. 2025From Retrieval to Generation: Unifying External and Parametric Knowledge for Medical Question Answering
  4. 2026Hybrid-IR: Dual-Path Hybrid Retrieval with Iterative Reasoning for Complex Medical Question Answering
  5. 2025Optimizing Medical Question-Answering Systems: A Comparative Study of Fine-Tuned and Zero-Shot Large Language Models with RAG Framework
  6. 2026PubMed Reasoner: Dynamic Reasoning-based Retrieval for Evidence-Grounded Biomedical Question Answering
  7. 2024Comprehensive and Practical Evaluation of Retrieval-Augmented Generation Systems for Medical Question Answering
  8. 2025RAR2: Retrieval-Augmented Medical Reasoning via Thought-Driven Retrieval