GenOM: Ontology Matching with Description Generation and Large Language Model
Not on the map. Why?
Abstract (arXiv)
Ontology matching (OM) plays an essential role in enabling semantic interoperability and integration across heterogeneous knowledge sources, particularly in the biomedical domain which contains numerous complex concepts related to diseases and pharmaceuticals. This paper introduces GenOM, a large language model (LLM)-based ontology alignment framework, which enriches the semantic representations of ontology concepts via generating textual definitions, retrieves alignment candidates with an embedding model, and incorporates exact matching-based tools to improve precision. Extensive experiments conducted on the OAEI Bio-ML track demonstrate that GenOM can often achieve competitive performance, surpassing many baselines including traditional OM systems and recent LLM-based methods. Further ablation studies confirm the effectiveness of semantic enrichment and few-shot prompting, highlighting the framework's robustness and adaptability.
Key facts. Cited by 2 papers in the map (data through 14 Oct 2026). Builds on 19 of its 42 references that are in the map. First posted on arXiv 14 Aug 2025.
Builds on
19 of 42 references.
References · 19
- 2018BERT: Pre-training of Deep Bidirectional Transformers for Language Understandingcited by 40,399
- 2019Sentence-BERT: Sentence Embeddings using Siamese BERT-Networkscited by 9,170
- 2017On Calibration of Modern Neural Networkscited by 4,960
- 2017Billion-scale similarity search with GPUscited by 2,497
- 2022Language Models (Mostly) Know What They Knowcited by 1,856
- 2022Prompting GPT-3 To Be Reliablecited by 260
- 2020Self-Alignment Pretraining for Biomedical Entity Representationscited by 237
- 2021BERTMap: A BERT-based Ontology Alignment Systemcited by 46
- 2023OLaLa: Ontology Matching with Large Language Modelscited by 35
- 2022Contextual Semantic Embeddings for Ontology Subsumption Predictioncited by 31
- 2023Agent-OM: Leveraging LLM Agents for Ontology Matchingcited by 27
- 2023Exploring Large Language Models for Ontology Alignmentcited by 26
7 more
- 2022Machine Learning-Friendly Biomedical Datasets for Equivalence and Subsumption Ontology Matchingcited by 22
- 2024LLMs4OM: Matching Ontologies with Large Language Modelscited by 22
- 2023DeepOnto: A Python Package for Ontology Engineering with Deep Learningcited by 20
- 2023Conversational Ontology Alignment with ChatGPTcited by 11
- 2018Ontology Alignment in the Biomedical Domain Using Entity Definitions and Contextcited by 10
- 2024TRAWL: External Knowledge-Enhanced Recommendation with LLM Assistancecited by 5
- 2025Large Language Models as Oracles for Ontology Alignmentcited by 3
Built on by
Citing papers per year: 2026: 2.
2 papers.