mlsanityData to 7 Oct 2026

SymmCD: Symmetry-Preserving Crystal Generation with Diffusion Models

arXiv 2502.03638 ↗First posted 5 Feb 2025cond-mat.mtrl-sci cs.LGcited by 48

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Abstract (arXiv)

Generating novel crystalline materials has the potential to lead to advancements in fields such as electronics, energy storage, and catalysis. The defining characteristic of crystals is their symmetry, which plays a central role in determining their physical properties. However, existing crystal generation methods either fail to generate materials that display the symmetries of real-world crystals, or simply replicate the symmetry information from examples in a database. To address this limitation, we propose SymmCD, a novel diffusion-based generative model that explicitly incorporates crystallographic symmetry into the generative process. We decompose crystals into two components and learn their joint distribution through diffusion: 1) the asymmetric unit, the smallest subset of the crystal which can generate the whole crystal through symmetry transformations, and; 2) the symmetry transformations needed to be applied to each atom in the asymmetric unit. We also use a novel and interpretable representation for these transformations, enabling generalization across different crystallographic symmetry groups. We showcase the competitive performance of SymmCD on a subset of the Materials Project, obtaining diverse and valid crystals with realistic symmetries and predicted properties.

Key facts. Cited by 48 papers in the map (data through 7 Oct 2026). Builds on 35 of its 65 references that are in the map. First posted on arXiv 5 Feb 2025.

Builds on

35 of 65 references.

References · 35

  1. 2020Denoising Diffusion Probabilistic Modelscited by 20,851
  2. 2015Deep Unsupervised Learning using Nonequilibrium Thermodynamicscited by 7,005
  3. 2021Improved Denoising Diffusion Probabilistic Modelscited by 3,736
  4. 2021Structured Denoising Diffusion Models in Discrete State-Spacescited by 1,665
  5. 2021E(n) Equivariant Graph Neural Networkscited by 951
  6. 2022Equivariant Diffusion for Molecule Generation in 3Dcited by 666
  7. 2020Directional Message Passing for Molecular Graphscited by 556
  8. 2022GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generationcited by 511
  9. 2022DiGress: Discrete Denoising diffusion for graph generationcited by 503
  10. 2021Crystal Diffusion Variational Autoencoder for Periodic Material Generationcited by 268
  11. 2020Fast and Uncertainty-Aware Directional Message Passing for Non-Equilibrium Moleculescited by 254
  12. 2020The Open Catalyst 2020 (OC20) Dataset and Community Challengescited by 246
23 more
  1. 2021E(n) Equivariant Normalizing Flowscited by 165
  2. 2023Crystal Structure Prediction by Joint Equivariant Diffusioncited by 142
  3. 2022Equivariance with Learned Canonicalization Functionscited by 106
  4. 2024FlowMM: Generating Materials with Riemannian Flow Matchingcited by 105
  5. 2023MatterGen: a generative model for inorganic materials designcited by 98
  6. 2024Fine-Tuned Language Models Generate Stable Inorganic Materials as Textcited by 92
  7. 2022Periodic Graph Transformers for Crystal Material Property Predictioncited by 87
  8. 2024Space Group Constrained Crystal Generationcited by 71
  9. 2023A Hitchhiker's Guide to Geometric GNNs for 3D Atomic Systemscited by 65
  10. 2023Language models can generate molecules, materials, and protein binding sites directly in three dimensions as XYZ, CIF, and PDB filescited by 59
  11. 2023Scalable Diffusion for Materials Generationcited by 52
  12. 2024Space Group Informed Transformer for Crystalline Materials Generationcited by 40
  13. 2023Matbench Discovery -- A framework to evaluate machine learning crystal stability predictionscited by 34
  14. 2018CrystalGAN: Learning to Discover Crystallographic Structures with Generative Adversarial Networkscited by 31
  15. 2023Crystal-GFN: sampling crystals with desirable properties and constraintscited by 29
  16. 2023Towards Symmetry-Aware Generation of Periodic Materialscited by 25
  17. 2022Equivariant Networks for Crystal Structurescited by 24
  18. 2023Symmetry Breaking and Equivariant Neural Networkscited by 24
  19. 2022The Open MatSci ML Toolkit: A Flexible Framework for Machine Learning in Materials Sciencecited by 14
  20. 2023MatSciML: A Broad, Multi-Task Benchmark for Solid-State Materials Modelingcited by 14
  21. 2024Less can be more for predicting properties with large language modelscited by 10
  22. 2023Vector Field Oriented Diffusion Model for Crystal Material Generationcited by 9
  23. 2024A Space Group Symmetry Informed Network for O(3) Equivariant Crystal Tensor Predictioncited by 7

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2025: 21; 2026: 27.

48 papers.

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  1. 2025WyckoffDiff -- A Generative Diffusion Model for Crystal Symmetrycited by 25
  2. 2025Wyckoff Transformer: Generation of Symmetric Crystalscited by 24
  3. 2025LeMat-GenBench: A Unified Evaluation Framework for Crystal Generative Modelscited by 20
  4. 2025Space Group Equivariant Crystal Diffusioncited by 15
  5. 2025LLM Meets Diffusion: A Hybrid Framework for Crystal Material Generationcited by 12
  6. 2025PLaID++: A Preference Aligned Language Model for Targeted Inorganic Materials Designcited by 11
  7. 2025Materials Generation in the Era of Artificial Intelligence: A Comprehensive Surveycited by 9
  8. 2025Kinetic Langevin Diffusion for Crystalline Materials Generationcited by 9
  9. 2026Crystalite: A Lightweight Transformer for Efficient Crystal Modelingcited by 9
  10. 2025Artificial Intelligence and Generative Models for Materials Discovery -- A Reviewcited by 8
  11. 2025CrystalDiT: A Diffusion Transformer for Crystal Generationcited by 6
  12. 2025Continuous SUN (Stable, Unique, and Novel) Metric for Generative Modeling of Inorganic Crystalscited by 5
36 more
  1. 2025Boltzmann generators for amorphous particle systemscited by 5
  2. 2026DMFlow: Disordered Materials Generation by Flow Matchingcited by 5
  3. 2026MolCrystalFlow: Molecular Crystal Structure Prediction via Flow Matchingcited by 5
  4. 2025OXtal: An All-Atom Diffusion Model for Organic Crystal Structure Predictioncited by 4
  5. 2026Multimodal Crystal Flow: Any-to-Any Modality Generation for Unified Crystal Modelingcited by 4
  6. 2025CLOUD: A Scalable and Physics-Informed Foundation Model for Crystal Representation Learningcited by 3
  7. 2025CrystalGym: A New Benchmark for Materials Discovery Using Reinforcement Learningcited by 3
  8. 2025MiAD: Mirage Atom Diffusion for De Novo Crystal Generationcited by 3
  9. 2025Generative Models for Crystalline Materialscited by 3
  10. 2026Zatom-1: Towards a Multimodal Foundation Model for 3D Molecules and Materialscited by 3
  11. 2026Fast Organic Crystal Structure Prediction with Unit Cell Flow Matchingcited by 3
  12. 2025AI-Assisted Rapid Crystal Structure Generation Towards a Target Local Environmentcited by 2
  13. 2026SLayerGen: a Crystal Generative Model for all Space and Layer Groupscited by 2
  14. 2026CrystalREPA: Transferring Physical Priors from Universal MLIPs to Crystal Generative Modelscited by 2
  15. 2026How Far Can You Grow? Characterizing the Extrapolation Frontier of Graph Generative Models for Materials Sciencecited by 1
  16. 2026Fourier Transformers for Latent Crystallographic Diffusion and Generative Modelingcited by 1
  17. 2026Crys-JEPA: Accelerating Crystal Discovery via Embedding Screening and Generative Refinementcited by 1
  18. 2026Composable Crystals: Controllable Materials Discovery via Concept Learningcited by 1
  19. 2026Discovering Crystal Structure Prediction Algorithms with an AI Co-Scientistcited by 1
  20. 2026OMatG-flash: An All-Atom Flow Map with Reinforce Adjoint Matching for Scalable Materials Discoverycited by 1
  21. 2025Symmetry-Informed Graph Neural Networks for Carbon Dioxide Isotherm and Adsorption Prediction in Aluminum-Substituted Zeolitescited by 0
  22. 2025Challenges in Non-Polymeric Crystal Structure Prediction: Why a Geometric, Permutation-Invariant Loss is Neededcited by 0
  23. 2025Symmetry Matters: Auditing and Symmetrizing 3D Generative Modelscited by 0
  24. 2026Generating Symmetric Materials using Latent Flow Matchingcited by 0
  25. 2026PRISMat: Policy-Driven, Permutation-Invariant Autoregressive Material Generationcited by 0
  26. 2026A Padding Method for Enhanced Encoding of Inorganic Structures with Varying Chemical Compositionscited by 0
  27. 2026Planar Symmetric Pattern Generationcited by 0
  28. 2026LapidaryEngine: Fully Conversational Crystal Generationcited by 0
  29. 2026Generative and multimodal AI for materials prediction and design: Progress, challenges, and perspectivescited by 0
  30. 2026CrystalGRPO: Target-Aligned and Coverage-Preserving Reinforcement Learning for Flow-Based Crystal Structure Predictioncited by 0
  31. 2026DynaCrys: Crystal Generation with Dynamic Space-Group Diffusioncited by 0
  32. 2026Symmetry-Breaking De Novo Crystal Generation via Markovian Jump Diffusioncited by 0
  33. 2026Autonomous discovery of new structure-plausibility laws for explainable and rapid crystal diagnosis and screeningcited by 0
  34. 2026uFlowCSP: Crystal Structure Prediction using Mean flow generative modelscited by 0
  35. 2026Symmetry- and Property-Aware Crystal Generation with Reinforcement Learning for Inverse Materials Designcited by 0
  36. 2026Deep Generative Crystal Structure Prediction: A Benchmark Study and a Controlled Test of Prototype Dependencecited by 0

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  1. 2024Discovery of 2D Materials via Symmetry-Constrained Diffusion Model
  2. 2025CrystalGRW: Generative Modeling of Crystal Structures with Targeted Properties via Geodesic Random Walks
  3. 2024Generative Inverse Design of Crystal Structures via Diffusion Models with Transformers
  4. 2026OxiGen: Oxidation-State-Aware Crystal Generation
  5. 2024Generative Design of Crystal Structures by Point Cloud Representations and Diffusion Model
  6. 2026C2NP: A Benchmark for Learning Scale-Dependent Geometric Invariances in 3D Materials Generation
  7. 2025Open Materials Generation with Stochastic Interpolants
  8. 2023Data-Driven Score-Based Models for Generating Stable Structures with Adaptive Crystal Cells