mlsanityData to 7 Oct 2026

Scalable Diffusion for Materials Generation

arXiv 2311.09235 ↗First posted 18 Oct 2023cs.LG cs.AIcited by 52

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Abstract (arXiv)

Generative models trained on internet-scale data are capable of generating novel and realistic texts, images, and videos. A natural next question is whether these models can advance science, for example by generating novel stable materials. Traditionally, models with explicit structures (e.g., graphs) have been used in modeling structural relationships in scientific data (e.g., atoms and bonds in crystals), but generating structures can be difficult to scale to large and complex systems. Another challenge in generating materials is the mismatch between standard generative modeling metrics and downstream applications. For instance, common metrics such as the reconstruction error do not correlate well with the downstream goal of discovering stable materials. In this work, we tackle the scalability challenge by developing a unified crystal representation that can represent any crystal structure (UniMat), followed by training a diffusion probabilistic model on these UniMat representations. Our empirical results suggest that despite the lack of explicit structure modeling, UniMat can generate high fidelity crystal structures from larger and more complex chemical systems, outperforming previous graph-based approaches under various generative modeling metrics. To better connect the generation quality of materials to downstream applications, such as discovering novel stable materials, we propose additional metrics for evaluating generative models of materials, including per-composition formation energy and stability with respect to convex hulls through decomposition energy from Density Function Theory (DFT). Lastly, we show that conditional generation with UniMat can scale to previously established crystal datasets with up to millions of crystals structures, outperforming random structure search (the current leading method for structure discovery) in discovering new stable materials.

Key facts. Cited by 52 papers in the map (data through 7 Oct 2026). Builds on 34 of its 73 references that are in the map. First posted on arXiv 18 Oct 2023.

Builds on

34 of 73 references.

References · 34

  1. 2020Denoising Diffusion Probabilistic Modelscited by 20,851
  2. 2021Diffusion Models Beat GANs on Image Synthesiscited by 8,185
  3. 2015Deep Unsupervised Learning using Nonequilibrium Thermodynamicscited by 7,005
  4. 2022Photorealistic Text-to-Image Diffusion Models with Deep Language Understandingcited by 6,322
  5. 2022Classifier-Free Diffusion Guidancecited by 5,717
  6. 2016PointNet: Deep Learning on Point Sets for 3D Classification and Segmentationcited by 5,223
  7. 2021Zero-Shot Text-to-Image Generationcited by 4,276
  8. 2019Generative Modeling by Estimating Gradients of the Data Distributioncited by 4,067
  9. 2022Imagen Video: High Definition Video Generation with Diffusion Modelscited by 1,765
  10. 2022Make-A-Video: Text-to-Video Generation without Text-Video Datacited by 1,725
  11. 2021Structured Denoising Diffusion Models in Discrete State-Spacescited by 1,665
  12. 20163D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotationcited by 1,471
22 more
  1. 2022Scaling Autoregressive Models for Content-Rich Text-to-Image Generationcited by 1,287
  2. 2023PaLM 2 Technical Reportcited by 1,154
  3. 2021Variational Diffusion Modelscited by 1,145
  4. 2021Diffusion Probabilistic Models for 3D Point Cloud Generationcited by 734
  5. 2021E(3)-Equivariant Graph Neural Networks for Data-Efficient and Accurate Interatomic Potentialscited by 701
  6. 2017SchNet: A continuous-filter convolutional neural network for modeling quantum interactionscited by 569
  7. 2022GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generationcited by 511
  8. 2022DiGress: Discrete Denoising diffusion for graph generationcited by 503
  9. 2022Score-based Generative Modeling of Graphs via the System of Stochastic Differential Equationscited by 273
  10. 2021Crystal Diffusion Variational Autoencoder for Periodic Material Generationcited by 268
  11. 2020Permutation Invariant Graph Generation via Score-Based Generative Modelingcited by 263
  12. 2023SE(3) diffusion model with application to protein backbone generationcited by 214
  13. 2017VEEGAN: Reducing Mode Collapse in GANs using Implicit Variational Learningcited by 199
  14. 2021GeoMol: Torsional Geometric Generation of Molecular 3D Conformer Ensemblescited by 106
  15. 2021A Conditional Point Diffusion-Refinement Paradigm for 3D Point Cloud Completioncited by 100
  16. 2023Language models can generate molecules, materials, and protein binding sites directly in three dimensions as XYZ, CIF, and PDB filescited by 59
  17. 2020An invertible crystallographic representation for general inverse design of inorganic crystals with targeted propertiescited by 53
  18. 2019Generative adversarial networks (GAN) based efficient sampling of chemical space for inverse design of inorganic materialscited by 46
  19. 2019Data-Driven Approach to Encoding and Decoding 3-D Crystal Structurescited by 34
  20. 2018CrystalGAN: Learning to Discover Crystallographic Structures with Generative Adversarial Networkscited by 31
  21. 2023Diffusion probabilistic models enhance variational autoencoder for crystal structure generative modelingcited by 17
  22. 2023Positional Diffusion: Ordering Unordered Sets with Diffusion Probabilistic Modelscited by 5

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2023: 1; 2024: 18; 2025: 23; 2026: 10.

52 papers.

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  1. 2024FlowMM: Generating Materials with Riemannian Flow Matchingcited by 105
  2. 2023MatterGen: a generative model for inorganic materials designcited by 98
  3. 2024Fine-Tuned Language Models Generate Stable Inorganic Materials as Textcited by 92
  4. 2025All-atom Diffusion Transformers: Unified generative modelling of molecules and materialscited by 75
  5. 2024EM Distillation for One-step Diffusion Modelscited by 60
  6. 2024FlowLLM: Flow Matching for Material Generation with Large Language Models as Base Distributionscited by 52
  7. 2025SymmCD: Symmetry-Preserving Crystal Generation with Diffusion Modelscited by 48
  8. 2024Accelerating Diffusion Models with Parallel Sampling: Inference at Sub-Linear Time Complexitycited by 42
  9. 2024Improving GFlowNets for Text-to-Image Diffusion Alignmentcited by 27
  10. 2025A practical guide to machine learning interatomic potentials -- Status and futurecited by 24
  11. 2025LeMat-GenBench: A Unified Evaluation Framework for Crystal Generative Modelscited by 20
  12. 2024MatExpert: Decomposing Materials Discovery by Mimicking Human Expertscited by 18
38 more
  1. 2024Structure-based out-of-distribution (OOD) materials property prediction: a benchmark studycited by 17
  2. 2024Images that Sound: Composing Images and Sounds on a Single Canvascited by 17
  3. 2025A Periodic Bayesian Flow for Material Generationcited by 15
  4. 2025Periodic Materials Generation using Text-Guided Joint Diffusion Modelcited by 15
  5. 2025Space Group Equivariant Crystal Diffusioncited by 15
  6. 2024Ab Initio Structure Solutions from Nanocrystalline Powder Diffraction Datacited by 12
  7. 2024Generative Hierarchical Materials Searchcited by 12
  8. 2025LLM Meets Diffusion: A Hybrid Framework for Crystal Material Generationcited by 12
  9. 2024Flow Matching for Accelerated Simulation of Atomic Transport in Crystalline Materialscited by 9
  10. 2025Symmetry-Aware Bayesian Flow Networks for Crystal Generationcited by 9
  11. 2025Materials Generation in the Era of Artificial Intelligence: A Comprehensive Surveycited by 9
  12. 2025Kinetic Langevin Diffusion for Crystalline Materials Generationcited by 9
  13. 2026Crystalite: A Lightweight Transformer for Efficient Crystal Modelingcited by 9
  14. 2024AdsorbDiff: Adsorbate Placement via Conditional Denoising Diffusioncited by 8
  15. 2025Establishing baselines for generative discovery of inorganic crystalscited by 8
  16. 2024Generative Inverse Design of Crystal Structures via Diffusion Models with Transformerscited by 7
  17. 2025Known Unknowns: Out-of-Distribution Property Prediction in Materials and Moleculescited by 7
  18. 2025Space Group Conditional Flow Matchingcited by 7
  19. 2024Chemistry-Inspired Diffusion with Non-Differentiable Guidancecited by 6
  20. 2025Learning Flexible Forward Trajectories for Masked Molecular Diffusioncited by 6
  21. 2026Open Materials Generation with Inference-Time Reinforcement Learningcited by 6
  22. 2025PowerGrow: Feasible Co-Growth of Structures and Dynamics for Power Grid Synthesiscited by 5
  23. 2025Mofasa: A Step Change in Metal-Organic Framework Generationcited by 5
  24. 2025Boltzmann generators for amorphous particle systemscited by 5
  25. 2025OXtal: An All-Atom Diffusion Model for Organic Crystal Structure Predictioncited by 4
  26. 2026Multimodal Crystal Flow: Any-to-Any Modality Generation for Unified Crystal Modelingcited by 4
  27. 2025MiAD: Mirage Atom Diffusion for De Novo Crystal Generationcited by 3
  28. 2026Zatom-1: Towards a Multimodal Foundation Model for 3D Molecules and Materialscited by 3
  29. 2025Introducing physics-informed generative models for targeting structural novelty in the exploration of chemical spacecited by 2
  30. 2026SLayerGen: a Crystal Generative Model for all Space and Layer Groupscited by 2
  31. 2024Grand canonical generative diffusion model for crystalline phases and grain boundariescited by 1
  32. 2024A Generation Framework with Strict Constraints for Crystal Materials Designcited by 1
  33. 2026CrystalReasoner: Reasoning and RL for Property-Conditioned Crystal Structure Generationcited by 1
  34. 2026Latent Diffusion Pretraining for Crystal Property Predictioncited by 1
  35. 2026SinAE: A Single-Architecture Flow-Matching Autoencoder for Cross-Domain Atomic Systemscited by 1
  36. 2024Structural Constraint Integration in Generative Model for Discovery of Quantum Material Candidatescited by 0
  37. 2025Fundamental Limits of Crystalline Equivariant Graph Neural Networks: A Circuit Complexity Perspectivecited by 0
  38. 2025Materium: An Autoregressive Approach for Material Generationcited by 0

50 most cited of 52 All 52 (JSON)

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  1. 2023Vector Field Oriented Diffusion Model for Crystal Material Generation
  2. 2026Fourier Transformers for Latent Crystallographic Diffusion and Generative Modeling
  3. 2024Generative Design of Crystal Structures by Point Cloud Representations and Diffusion Model
  4. 2023Data-Driven Score-Based Models for Generating Stable Structures with Adaptive Crystal Cells
  5. 2025CrystalDiT: A Diffusion Transformer for Crystal Generation
  6. 2025Open Materials Generation with Stochastic Interpolants
  7. 2026Lang2Str: Two-Stage Crystal Structure Generation with LLMs and Continuous Flow Models
  8. 2026Finetuning-Free Diffusion Model with Adaptive Constraint Guidance for Inorganic Crystal Structure Generation