Markov Equivalence and Consistency in Differentiable Structure Learning
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Abstract (arXiv)
Existing approaches to differentiable structure learning of directed acyclic graphs (DAGs) rely on strong identifiability assumptions in order to guarantee that global minimizers of the acyclicity-constrained optimization problem identifies the true DAG. Moreover, it has been observed empirically that the optimizer may exploit undesirable artifacts in the loss function. We explain and remedy these issues by studying the behavior of differentiable acyclicity-constrained programs under general likelihoods with multiple global minimizers. By carefully regularizing the likelihood, it is possible to identify the sparsest model in the Markov equivalence class, even in the absence of an identifiable parametrization. We first study the Gaussian case in detail, showing how proper regularization of the likelihood defines a score that identifies the sparsest model. Assuming faithfulness, it also recovers the Markov equivalence class. These results are then generalized to general models and likelihoods, where the same claims hold. These theoretical results are validated empirically, showing how this can be done using standard gradient-based optimizers, thus paving the way for differentiable structure learning under general models and losses.
Key facts. Cited by 7 papers in the map (data through 14 Oct 2026). Builds on 33 of its 72 references that are in the map. First posted on arXiv 8 Oct 2024.
Builds on
33 of 72 references.
References · 33
- 2014Adam: A Method for Stochastic Optimizationcited by 37,240
- 2021Convex optimizationcited by 2,515
- 2018DAGs with NO TEARS: Continuous Optimization for Structure Learningcited by 752
- 2019DAG-GNN: DAG Structure Learning with Graph Neural Networkscited by 331
- 2013Causal Discovery with Continuous Additive Noise Modelscited by 255
- 2019Gradient-Based Neural DAG Learningcited by 227
- 2020Differentiable Causal Discovery from Interventional Datacited by 218
- 2020DYNOTEARS: Structure Learning from Time-Series Datacited by 200
- 2020On the Role of Sparsity and DAG Constraints for Learning Linear DAGscited by 191
- 2013Learning Bayesian Networks: The Combination of Knowledge and Statistical Datacited by 187
- 2013CAM: Causal additive models, high-dimensional order search and penalized regressioncited by 178
- 2021Beware of the Simulated DAG! Causal Discovery Benchmarks May Be Easy To Gamecited by 161
21 more
- 2019Causal Discovery with Reinforcement Learningcited by 145
- 2022DAGMA: Learning DAGs via M-matrices and a Log-Determinant Acyclicity Characterizationcited by 140
- 2013High-dimensional learning of linear causal networks via inverse covariance estimationcited by 87
- 2020DAGs with No Fears: A Closer Look at Continuous Optimization for Learning Bayesian Networkscited by 66
- 2019Causal Discovery with General Non-Linear Relationships Using Non-Linear ICAcited by 58
- 2017Learning linear structural equation models in polynomial time and sample complexitycited by 51
- 2018Structural Agnostic Modeling: Adversarial Learning of Causal Graphscited by 48
- 2020CASTLE: Regularization via Auxiliary Causal Graph Discoverycited by 41
- 2019Scaling structural learning with NO-BEARS to infer causal transcriptome networkscited by 39
- 2020On the Convergence of Continuous Constrained Optimization for Structure Learningcited by 38
- 2023Structure Learning with Continuous Optimization: A Sober Look and Beyondcited by 36
- 2020A polynomial-time algorithm for learning nonparametric causal graphscited by 30
- 2014Concave Penalized Estimation of Sparse Gaussian Bayesian Networkscited by 28
- 2017Learning Identifiable Gaussian Bayesian Networks in Polynomial Time and Sample Complexitycited by 27
- 2022Truncated Matrix Power Iteration for Differentiable DAG Learningcited by 23
- 2017Learning Quadratic Variance Function (QVF) DAG models via OverDispersion Scoring (ODS)cited by 18
- 2020Causal Adversarial Network for Learning Conditional and Interventional Distributionscited by 13
- 2022Distributed Learning of Generalized Linear Causal Networkscited by 13
- 2014Penalized Estimation of Directed Acyclic Graphs From Discrete Datacited by 10
- 2018High-Dimensional Poisson DAG Model Learning Using ℓ1-Regularized Regressioncited by 10
- 2013Graph estimation with joint additive modelscited by 6
Built on by
Citing papers per year: 2025: 3; 2026: 4.
7 papers.
- 2025DAG DECORation: Continuous Optimization for Structure Learning under Hidden Confoundingcited by 2
- 2025Causal Mechanism Estimation in Multi-Sensor Systems Across Multiple Domainscited by 0
- 2025Differentiable Structure Learning and Causal Discovery for General Binary Datacited by 0
- 2026Structure Learning on Clustered Datacited by 0
- 2026Support Selection Beyond Smooth DAG Exactness: Completion Geometry,Score Margins, and Selective Certificatescited by 0
- 2026xWhyL: Causal Interactive Learningcited by 0
- 2026Learning Non-Gaussian SEMs with Conditional Risk, and Why the Direction of Recursion Matterscited by 0
- 2026Learning Non-Gaussian SEMs with Conditional Risk, and Why the Direction of Recursion Matters9 Oct 2026
- 2026xWhyL: Causal Interactive Learning22 Sep 2026
- 2026Support Selection Beyond Smooth DAG Exactness: Completion Geometry,Score Margins, and Selective Certificates8 Aug 2026
- 2026Structure Learning on Clustered Data9 Jul 2026
- 2025DAG DECORation: Continuous Optimization for Structure Learning under Hidden Confounding2 Oct 2025
- 2025Differentiable Structure Learning and Causal Discovery for General Binary Data25 Sep 2025
- 2025Causal Mechanism Estimation in Multi-Sensor Systems Across Multiple Domains23 Jul 2025