GraphAlign: Pretraining One Graph Neural Network on Multiple Graphs via Feature Alignment
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Abstract (arXiv)
Graph self-supervised learning (SSL) holds considerable promise for mining and learning with graph-structured data. Yet, a significant challenge in graph SSL lies in the feature discrepancy among graphs across different domains. In this work, we aim to pretrain one graph neural network (GNN) on a varied collection of graphs endowed with rich node features and subsequently apply the pretrained GNN to unseen graphs. We present a general GraphAlign method that can be seamlessly integrated into the existing graph SSL framework. To align feature distributions across disparate graphs, GraphAlign designs alignment strategies of feature encoding, normalization, alongside a mixture-of-feature-expert module. Extensive experiments show that GraphAlign empowers existing graph SSL frameworks to pretrain a unified and powerful GNN across multiple graphs, showcasing performance superiority on both in-domain and out-of-domain graphs.
Key facts. Cited by 15 papers in the map (data through 14 Oct 2026). Builds on 41 of its 50 references that are in the map. First posted on arXiv 5 Jun 2024.
Builds on
41 of 50 references.
References · 41
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29 more
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Citing papers per year: 2024: 3; 2025: 7; 2026: 5.
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- 2025UniGraph2: Learning a Unified Embedding Space to Bind Multimodal Graphscited by 49
- 2024Text-space Graph Foundation Models: Comprehensive Benchmarks and New Insightscited by 44
- 2024One Model for One Graph: A New Perspective for Pretraining with Cross-domain Graphscited by 12
- 2025Exploring Graph Learning Tasks with Pure LLMs: A Comprehensive Benchmark and Investigationcited by 12
- 2024Graph Learning in the Era of LLMs: A Survey from the Perspective of Data, Models, and Taskscited by 10
- 2025Model Generalization on Text Attribute Graphs: Principles with Large Language Modelscited by 8
- 2025Towards Graph Foundation Models: A Transferability Perspectivecited by 7
- 2025BioMol-MQA: A Multi-Modal Question Answering Dataset For LLM Reasoning Over Bio-Molecular Interactionscited by 4
- 2026Modality-free Graph In-context Alignmentcited by 3
- 2025A Survey of Cross-domain Graph Learning: Progress and Future Directionscited by 2
- 2025RELATE: A Schema-Agnostic Perceiver Encoder for Multimodal Relational Graphscited by 1
- 2026Generalist Graph Anomaly Detection via Prototype-Based Distillationcited by 1
- 2026What Makes Graph Unified? Principles and Generative Sliding-Window Transformer for Graph Foundation Models30 Jul 2026
- 2026Generalist Graph Anomaly Detection via Prototype-Based Distillation26 May 2026
- 2026Unified Graph Prompt Learning via Low-Rank Graph Message Prompting13 Apr 2026
- 2026Modality-free Graph In-context Alignment13 Mar 2026
- 2026Heterogeneous Graph Alignment for Joint Reasoning and Interpretability30 Jan 2026
- 2025RELATE: A Schema-Agnostic Perceiver Encoder for Multimodal Relational Graphs22 Oct 2025
- 2025BioMol-MQA: A Multi-Modal Question Answering Dataset For LLM Reasoning Over Bio-Molecular Interactions6 Jun 2025
- 2025A Survey of Cross-domain Graph Learning: Progress and Future Directions14 Mar 2025
- 2025Towards Graph Foundation Models: A Transferability Perspective12 Mar 2025
- 2025Exploring Graph Learning Tasks with Pure LLMs: A Comprehensive Benchmark and Investigation26 Feb 2025
- 2025Model Generalization on Text Attribute Graphs: Principles with Large Language Models17 Feb 2025
- 2025UniGraph2: Learning a Unified Embedding Space to Bind Multimodal Graphs2 Feb 2025
3 more
- 2024Text-space Graph Foundation Models: Comprehensive Benchmarks and New Insightscited by 44
- 2024One Model for One Graph: A New Perspective for Pretraining with Cross-domain Graphscited by 12
- 2025Exploring Graph Learning Tasks with Pure LLMs: A Comprehensive Benchmark and Investigationcited by 12
- 2024Graph Learning in the Era of LLMs: A Survey from the Perspective of Data, Models, and Taskscited by 10
- 2025Model Generalization on Text Attribute Graphs: Principles with Large Language Modelscited by 8
- 2025Towards Graph Foundation Models: A Transferability Perspectivecited by 7
- 2026Modality-free Graph In-context Alignmentcited by 3
- 2025A Survey of Cross-domain Graph Learning: Progress and Future Directionscited by 2
- 2025RELATE: A Schema-Agnostic Perceiver Encoder for Multimodal Relational Graphscited by 1
- 2026Generalist Graph Anomaly Detection via Prototype-Based Distillationcited by 1
- 2026Heterogeneous Graph Alignment for Joint Reasoning and Interpretabilitycited by 0
- 2026Unified Graph Prompt Learning via Low-Rank Graph Message Promptingcited by 0
12 most cited of 13 All 13 (JSON)
- 2026What Makes Graph Unified? Principles and Generative Sliding-Window Transformer for Graph Foundation Models30 Jul 2026
- 2026Generalist Graph Anomaly Detection via Prototype-Based Distillation26 May 2026
- 2026Unified Graph Prompt Learning via Low-Rank Graph Message Prompting13 Apr 2026
- 2026Modality-free Graph In-context Alignment13 Mar 2026
- 2026Heterogeneous Graph Alignment for Joint Reasoning and Interpretability30 Jan 2026
- 2025RELATE: A Schema-Agnostic Perceiver Encoder for Multimodal Relational Graphs22 Oct 2025
- 2025A Survey of Cross-domain Graph Learning: Progress and Future Directions14 Mar 2025
- 2025Towards Graph Foundation Models: A Transferability Perspective12 Mar 2025
- 2025Exploring Graph Learning Tasks with Pure LLMs: A Comprehensive Benchmark and Investigation26 Feb 2025
- 2025Model Generalization on Text Attribute Graphs: Principles with Large Language Models17 Feb 2025
- 2024Graph Learning in the Era of LLMs: A Survey from the Perspective of Data, Models, and Tasks17 Dec 2024
- 2024One Model for One Graph: A New Perspective for Pretraining with Cross-domain Graphs30 Nov 2024
12 newest of 13 All 13 (JSON)