Graph Auto-Encoder Via Neighborhood Wasserstein Reconstruction
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Abstract (arXiv)
Graph neural networks (GNNs) have drawn significant research attention recently, mostly under the setting of semi-supervised learning. When task-agnostic representations are preferred or supervision is simply unavailable, the auto-encoder framework comes in handy with a natural graph reconstruction objective for unsupervised GNN training. However, existing graph auto-encoders are designed to reconstruct the direct links, so GNNs trained in this way are only optimized towards proximity-oriented graph mining tasks, and will fall short when the topological structures matter. In this work, we revisit the graph encoding process of GNNs which essentially learns to encode the neighborhood information of each node into an embedding vector, and propose a novel graph decoder to reconstruct the entire neighborhood information regarding both proximity and structure via Neighborhood Wasserstein Reconstruction (NWR). Specifically, from the GNN embedding of each node, NWR jointly predicts its node degree and neighbor feature distribution, where the distribution prediction adopts an optimal-transport loss based on the Wasserstein distance. Extensive experiments on both synthetic and real-world network datasets show that the unsupervised node representations learned with NWR have much more advantageous in structure-oriented graph mining tasks, while also achieving competitive performance in proximity-oriented ones.
Key facts. Cited by 28 papers in the map (data through 7 Oct 2026). Builds on 42 of its 62 references that are in the map. First posted on arXiv 18 Feb 2022.
Builds on
42 of 62 references.
References · 42
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2017Inductive Representation Learning on Large Graphscited by 6,284
- 2018How Powerful are Graph Neural Networks?cited by 4,355
- 2017Neural Message Passing for Quantum Chemistrycited by 3,460
- 2013Sinkhorn Distances: Lightspeed Computation of Optimal Transportation Distancescited by 2,277
- 2017Improved Training of Wasserstein GANscited by 2,223
- 2015Unsupervised Representation Learning with Deep Convolutional Generative Adversarial Networkscited by 2,048
- 2016node2vec: Scalable Feature Learning for Networkscited by 1,913
- 2014DeepWalk: Online Learning of Social Representationscited by 1,543
- 2019Simplifying Graph Convolutional Networkscited by 1,470
- 2016Variational Graph Auto-Encoderscited by 1,373
30 more
- 2020Graph Contrastive Learning with Augmentationscited by 1,203
- 2018Deep Graph Infomaxcited by 1,101
- 2018Predict then Propagate: Graph Neural Networks meet Personalized PageRankcited by 987
- 2016A Point Set Generation Network for 3D Object Reconstruction from a Single Imagecited by 972
- 2019Strategies for Pre-training Graph Neural Networkscited by 964
- 2020Geom-GCN: Geometric Graph Convolutional Networkscited by 821
- 2020Contrastive Multi-View Representation Learning on Graphscited by 651
- 2020Adaptive Universal Generalized PageRank Graph Neural Networkcited by 592
- 2019Multi-scale Attributed Node Embeddingcited by 543
- 2015Optimal Transport for Domain Adaptationcited by 457
- 2017Representation Learning on Graphs: Methods and Applicationscited by 456
- 2019InfoGraph: Unsupervised and Semi-supervised Graph-Level Representation Learning via Mutual Information Maximizationcited by 441
- 2017Wasserstein Auto-Encoderscited by 371
- 2019On Mutual Information Maximization for Representation Learningcited by 315
- 2019PairNorm: Tackling Oversmoothing in GNNscited by 297
- 2017struc2vec: Learning Node Representations from Structural Identitycited by 214
- 2021Adversarial Graph Augmentation to Improve Graph Contrastive Learningcited by 200
- 2017Network Embedding as Matrix Factorization: Unifying DeepWalk, LINE, PTE, and node2veccited by 197
- 2015Learning with a Wasserstein Losscited by 194
- 2021Self-Supervised Learning of Graph Neural Networks: A Unified Reviewcited by 184
- 2019Gromov-Wasserstein Learning for Graph Matching and Node Embeddingcited by 125
- 2018Graphite: Iterative Generative Modeling of Graphscited by 112
- 2019Scalable Gromov-Wasserstein Learning for Graph Partitioning and Matchingcited by 102
- 2017Learning Structural Node Embeddings Via Diffusion Waveletscited by 97
- 2020Transfer Learning of Graph Neural Networks with Ego-graph Information Maximizationcited by 93
- 2020Non-Local Graph Neural Networkscited by 91
- 2021On Positional and Structural Node Features for Graph Neural Networks on Non-attributed Graphscited by 49
- 2020Secure Deep Graph Generation with Link Differential Privacycited by 24
- 2021Graph Attention Networks with Positional Embeddingscited by 16
- 2019Effective Decoding in Graph Auto-Encoder using Triadic Closurecited by 13
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Citing papers per year: 2022: 5; 2023: 10; 2024: 9; 2025: 3; 2026: 1.
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- 2022GraphMAE: Self-Supervised Masked Graph Autoencoderscited by 443
- 2023GraphMAE2: A Decoding-Enhanced Masked Self-Supervised Graph Learnercited by 131
- 2023Graph Mixture of Experts: Learning on Large-Scale Graphs with Explicit Diversity Modelingcited by 63
- 2023GAD-NR: Graph Anomaly Detection via Neighborhood Reconstructioncited by 44
- 2023Simple and Asymmetric Graph Contrastive Learning without Augmentationscited by 37
- 2023VQGraph: Rethinking Graph Representation Space for Bridging GNNs and MLPscited by 34
- 2022Graph Neural Networks in IoT: A Surveycited by 27
- 2024GraphAlign: Pretraining One Graph Neural Network on Multiple Graphs via Feature Alignmentcited by 15
- 2024Deep Efficient Private Neighbor Generation for Subgraph Federated Learningcited by 14
- 2023MUSE: Multi-View Contrastive Learning for Heterophilic Graphscited by 13
- 2022Decoupled Self-supervised Learning for Non-Homophilous Graphscited by 10
- 2024A Survey on Self-Supervised Graph Foundation Models: Knowledge-Based Perspectivecited by 9
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- 2025Controllable Graph Generation with Diffusion Models via Inference-Time Tree Search Guidancecited by 5
- 2023Empowering Dual-Level Graph Self-Supervised Pretraining with Motif Discoverycited by 4
- 2024Signed Graph Autoencoder for Explainable and Polarization-Aware Network Embeddingscited by 4
- 2025Discrepancy-Aware Graph Mask Auto-Encodercited by 4
- 2023Contrastive Learning for Non-Local Graphs with Multi-Resolution Structural Viewscited by 3
- 2024ROGPL: Robust Open-Set Graph Learning via Region-Based Prototype Learningcited by 2
- 2022Towards Consistency and Complementarity: A Multiview Graph Information Bottleneck Approachcited by 0
- 2023Isomorphic-Consistent Variational Graph Auto-Encoders for Multi-Level Graph Representation Learningcited by 0
- 2024Establishing Deep InfoMax as an effective self-supervised learning methodology in materials informaticscited by 0
- 2024High-Pass Graph Convolutional Network for Enhanced Anomaly Detection: A Novel Approachcited by 0
- 2025Auto-encoding Molecules: Graph-Matching Capabilities Mattercited by 0
- 2026α-Graph: Attention-Infused Normalizing Flow Approach to Tractable Graph Modelingcited by 0
- 2026α-Graph: Attention-Infused Normalizing Flow Approach to Tractable Graph Modeling7 Sep 2026
- 2025Controllable Graph Generation with Diffusion Models via Inference-Time Tree Search Guidance12 Oct 2025
- 2025Discrepancy-Aware Graph Mask Auto-Encoder24 Jun 2025
- 2025Auto-encoding Molecules: Graph-Matching Capabilities Matter1 Mar 2025
- 2024High-Pass Graph Convolutional Network for Enhanced Anomaly Detection: A Novel Approach4 Nov 2024
- 2024Signed Graph Autoencoder for Explainable and Polarization-Aware Network Embeddings16 Sep 2024
- 2024Establishing Deep InfoMax as an effective self-supervised learning methodology in materials informatics30 Jun 2024
- 2024A Pure Transformer Pretraining Framework on Text-attributed Graphs19 Jun 2024
- 2024GraphAlign: Pretraining One Graph Neural Network on Multiple Graphs via Feature Alignment5 Jun 2024
- 2024A Survey on Self-Supervised Graph Foundation Models: Knowledge-Based Perspective24 Mar 2024
- 2024ROGPL: Robust Open-Set Graph Learning via Region-Based Prototype Learning28 Feb 2024
- 2024A Survey of Few-Shot Learning on Graphs: from Meta-Learning to Pre-Training and Prompt Learning2 Feb 2024
16 more
- 2024Deep Efficient Private Neighbor Generation for Subgraph Federated Learning9 Jan 2024
- 2023Empowering Dual-Level Graph Self-Supervised Pretraining with Motif Discovery19 Dec 2023
- 2023Isomorphic-Consistent Variational Graph Auto-Encoders for Multi-Level Graph Representation Learning9 Dec 2023
- 2023AI-accelerated Discovery of Altermagnetic Materials8 Nov 2023
- 2023Simple and Asymmetric Graph Contrastive Learning without Augmentations29 Oct 2023
- 2023Contrastive Learning for Non-Local Graphs with Multi-Resolution Structural Views19 Aug 2023
- 2023VQGraph: Rethinking Graph Representation Space for Bridging GNNs and MLPs4 Aug 2023
- 2023MUSE: Multi-View Contrastive Learning for Heterophilic Graphs29 Jul 2023
- 2023GAD-NR: Graph Anomaly Detection via Neighborhood Reconstruction2 Jun 2023
- 2023GraphMAE2: A Decoding-Enhanced Masked Self-Supervised Graph Learner10 Apr 2023
- 2023Graph Mixture of Experts: Learning on Large-Scale Graphs with Explicit Diversity Modeling6 Apr 2023
- 2022Towards Consistency and Complementarity: A Multiview Graph Information Bottleneck Approach11 Oct 2022
- 2022Decoupled Self-supervised Learning for Non-Homophilous Graphs7 Jun 2022
- 2022GraphMAE: Self-Supervised Masked Graph Autoencoders22 May 2022
- 2022Graph Neural Networks in IoT: A Survey29 Mar 2022
- 2022Unsupervised Network Embedding Beyond Homophily21 Mar 2022
- 2022GraphMAE: Self-Supervised Masked Graph Autoencoderscited by 443
- 2023GraphMAE2: A Decoding-Enhanced Masked Self-Supervised Graph Learnercited by 131
- 2023GAD-NR: Graph Anomaly Detection via Neighborhood Reconstructioncited by 44
- 2023Simple and Asymmetric Graph Contrastive Learning without Augmentationscited by 37
- 2023VQGraph: Rethinking Graph Representation Space for Bridging GNNs and MLPscited by 34
- 2022Graph Neural Networks in IoT: A Surveycited by 27
- 2024GraphAlign: Pretraining One Graph Neural Network on Multiple Graphs via Feature Alignmentcited by 15
- 2024Deep Efficient Private Neighbor Generation for Subgraph Federated Learningcited by 14
- 2023MUSE: Multi-View Contrastive Learning for Heterophilic Graphscited by 13
- 2022Decoupled Self-supervised Learning for Non-Homophilous Graphscited by 10
- 2024A Survey on Self-Supervised Graph Foundation Models: Knowledge-Based Perspectivecited by 9
- 2022Unsupervised Network Embedding Beyond Homophilycited by 7
12 most cited of 26 All 26 (JSON)
- 2026α-Graph: Attention-Infused Normalizing Flow Approach to Tractable Graph Modeling7 Sep 2026
- 2025Discrepancy-Aware Graph Mask Auto-Encoder24 Jun 2025
- 2025Auto-encoding Molecules: Graph-Matching Capabilities Matter1 Mar 2025
- 2024High-Pass Graph Convolutional Network for Enhanced Anomaly Detection: A Novel Approach4 Nov 2024
- 2024Signed Graph Autoencoder for Explainable and Polarization-Aware Network Embeddings16 Sep 2024
- 2024Establishing Deep InfoMax as an effective self-supervised learning methodology in materials informatics30 Jun 2024
- 2024A Pure Transformer Pretraining Framework on Text-attributed Graphs19 Jun 2024
- 2024GraphAlign: Pretraining One Graph Neural Network on Multiple Graphs via Feature Alignment5 Jun 2024
- 2024A Survey on Self-Supervised Graph Foundation Models: Knowledge-Based Perspective24 Mar 2024
- 2024ROGPL: Robust Open-Set Graph Learning via Region-Based Prototype Learning28 Feb 2024
- 2024A Survey of Few-Shot Learning on Graphs: from Meta-Learning to Pre-Training and Prompt Learning2 Feb 2024
- 2024Deep Efficient Private Neighbor Generation for Subgraph Federated Learning9 Jan 2024
12 newest of 26 All 26 (JSON)