Relevance of Rotationally Equivariant Convolutions for Predicting Molecular Properties
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Abstract (arXiv)
Equivariant neural networks (ENNs) are graph neural networks embedded in ℝ3 and are well suited for predicting molecular properties. The ENN library e3nn has customizable convolutions, which can be designed to depend only on distances between points, or also on angular features, making them rotationally invariant, or equivariant, respectively. This paper studies the practical value of including angular dependencies for molecular property prediction directly via an ablation study with texttte3nn and the QM9 data set. We find that, for fixed network depth and parameter count, adding angular features decreased test error by an average of 23%. Meanwhile, increasing network depth decreased test error by only 4% on average, implying that rotationally equivariant layers are comparatively parameter efficient. We present an explanation of the accuracy improvement on the dipole moment, the target which benefited most from the introduction of angular features.
Key facts. Cited by 51 papers in the map (data through 7 Oct 2026). First posted on arXiv 19 Aug 2020.
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Citing papers per year: 2021: 11; 2022: 16; 2023: 11; 2024: 6; 2025: 5; 2026: 2.
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- 2021E(n) Equivariant Graph Neural Networkscited by 951
- 2022GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generationcited by 511
- 2021Equivariant message passing for the prediction of tensorial properties and molecular spectracited by 438
- 2022Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphscited by 258
- 2022Learning Local Equivariant Representations for Large-Scale Atomistic Dynamicscited by 254
- 2021Geometric and Physical Quantities Improve E(3) Equivariant Message Passingcited by 225
- 2023EquiformerV2: Improved Equivariant Transformer for Scaling to Higher-Degree Representationscited by 201
- 2022e3nn: Euclidean Neural Networkscited by 171
- 2021Learning Gradient Fields for Molecular Conformation Generationcited by 162
- 2022Pre-training via Denoising for Molecular Property Predictioncited by 124
- 2021Geometric Deep Learning on Molecular Representationscited by 113
- 2024FlowMM: Generating Materials with Riemannian Flow Matchingcited by 105
38 more
- 2025Adjoint Sampling: Highly Scalable Diffusion Samplers via Adjoint Matchingcited by 78
- 2021Rotation Invariant Graph Neural Networks using Spin Convolutionscited by 52
- 2024FlowLLM: Flow Matching for Material Generation with Large Language Models as Base Distributionscited by 52
- 2022Unsupervised Learning of Group Invariant and Equivariant Representationscited by 38
- 2023Geometric Clifford Algebra Networkscited by 37
- 2022Ab-initio quantum chemistry with neural-network wavefunctionscited by 28
- 2022INO: Invariant Neural Operators for Learning Complex Physical Systems with Momentum Conservationcited by 28
- 2021Relative Molecule Self-Attention Transformercited by 21
- 2022Graph Neural Networks for Moleculescited by 21
- 2021Federated Learning of Molecular Properties with Graph Neural Networks in a Heterogeneous Settingcited by 19
- 2022Equivariant Graph Attention Networks for Molecular Property Predictioncited by 19
- 2024Generalizing Denoising to Non-Equilibrium Structures Improves Equivariant Force Fieldscited by 18
- 2024EquiJump: Protein Dynamics Simulation via SO(3)-Equivariant Stochastic Interpolantscited by 15
- 2021Applying Machine Learning to Study Fluid Mechanicscited by 13
- 2022Machine learning and invariant theorycited by 13
- 2023Using Multiple Vector Channels Improves E(n)-Equivariant Graph Neural Networkscited by 10
- 2022Implicit Convolutional Kernels for Steerable CNNscited by 9
- 2023Task-Equivariant Graph Few-shot Learningcited by 8
- 2025SE(3)-Equivariant Diffusion Policy in Spherical Fourier Spacecited by 7
- 2026EquiformerV3: Scaling Efficient, Expressive, and General SE(3)-Equivariant Graph Attention Transformerscited by 7
- 2021Optimal radial basis for density-based atomic representationscited by 4
- 2023Symmetry-enforcing neural networks with applications to constitutive modelingcited by 4
- 2026Explainable AI: Learning from the Learnerscited by 4
- 2023Geometric Deep Learning for Molecular Crystal Structure Predictioncited by 3
- 2023StrainTensorNet: Predicting crystal structure elastic properties using SE(3)-equivariant graph neural networkscited by 3
- 2023Ophiuchus: Scalable Modeling of Protein Structures through Hierarchical Coarse-graining SO(3)-Equivariant Autoencoderscited by 3
- 2024Molecule Graph Networks with Many-body Equivariant Interactionscited by 3
- 2025Equivariant Spherical Transformer for Efficient Molecular Modelingcited by 3
- 2023Molecular Conformation Generation via Shifting Scorescited by 2
- 2024Accelerating superconductor discovery through tempered deep learning of the electron-phonon spectral functioncited by 2
- 2022Machine learning frontier orbital energies of nanodiamondscited by 1
- 2022Learning Regularized Positional Encoding for Molecular Predictioncited by 1
- 2021Flexible dual-branched message passing neural network for quantum mechanical property prediction with molecular conformationcited by 0
- 2022Transferring Chemical and Energetic Knowledge Between Molecular Systems with Machine Learningcited by 0
- 2022Hierarchical Learning in Euclidean Neural Networkscited by 0
- 2023On Accelerating Diffusion-based Molecular Conformation Generation in SE(3)-invariant Spacecited by 0
- 2023Diffusion-Driven Generative Framework for Molecular Conformation Predictioncited by 0
- 2025Permutation Equivariant Neural Networks for Symmetric Tensorscited by 0
50 most cited of 51 All 51 (JSON)
- 2026EquiformerV3: Scaling Efficient, Expressive, and General SE(3)-Equivariant Graph Attention Transformers10 Apr 2026
- 2026Explainable AI: Learning from the Learners9 Jan 2026
- 2025A 3D Machine Learning based Volume Of Fluid scheme without explicit interface reconstruction7 Jul 2025
- 2025SE(3)-Equivariant Diffusion Policy in Spherical Fourier Space2 Jul 2025
- 2025Equivariant Spherical Transformer for Efficient Molecular Modeling29 May 2025
- 2025Adjoint Sampling: Highly Scalable Diffusion Samplers via Adjoint Matching16 Apr 2025
- 2025Permutation Equivariant Neural Networks for Symmetric Tensors14 Mar 2025
- 2024FlowLLM: Flow Matching for Material Generation with Large Language Models as Base Distributions30 Oct 2024
- 2024EquiJump: Protein Dynamics Simulation via SO(3)-Equivariant Stochastic Interpolants12 Oct 2024
- 2024Molecule Graph Networks with Many-body Equivariant Interactions19 Jun 2024
- 2024FlowMM: Generating Materials with Riemannian Flow Matching7 Jun 2024
- 2024Generalizing Denoising to Non-Equilibrium Structures Improves Equivariant Force Fields14 Mar 2024
38 more
- 2024Accelerating superconductor discovery through tempered deep learning of the electron-phonon spectral function29 Jan 2024
- 2023Diffusion-Driven Generative Framework for Molecular Conformation Prediction22 Dec 2023
- 2023Symmetry-enforcing neural networks with applications to constitutive modeling21 Dec 2023
- 2023On Accelerating Diffusion-based Molecular Conformation Generation in SE(3)-invariant Space7 Oct 2023
- 2023Ophiuchus: Scalable Modeling of Protein Structures through Hierarchical Coarse-graining SO(3)-Equivariant Autoencoders4 Oct 2023
- 2023Molecular Conformation Generation via Shifting Scores12 Sep 2023
- 2023Using Multiple Vector Channels Improves E(n)-Equivariant Graph Neural Networks6 Sep 2023
- 2023StrainTensorNet: Predicting crystal structure elastic properties using SE(3)-equivariant graph neural networks22 Jun 2023
- 2023EquiformerV2: Improved Equivariant Transformer for Scaling to Higher-Degree Representations21 Jun 2023
- 2023Task-Equivariant Graph Few-shot Learning30 May 2023
- 2023Geometric Deep Learning for Molecular Crystal Structure Prediction17 Mar 2023
- 2023Geometric Clifford Algebra Networks13 Feb 2023
- 2022INO: Invariant Neural Operators for Learning Complex Physical Systems with Momentum Conservation29 Dec 2022
- 2022Implicit Convolutional Kernels for Steerable CNNs12 Dec 2022
- 2022Learning Regularized Positional Encoding for Molecular Prediction23 Nov 2022
- 2022Hierarchical Learning in Euclidean Neural Networks10 Oct 2022
- 2022Machine learning frontier orbital energies of nanodiamonds30 Sep 2022
- 2022Machine learning and invariant theory29 Sep 2022
- 2022Graph Neural Networks for Molecules12 Sep 2022
- 2022Ab-initio quantum chemistry with neural-network wavefunctions26 Aug 2022
- 2022e3nn: Euclidean Neural Networks18 Jul 2022
- 2022Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphs23 Jun 2022
- 2022Pre-training via Denoising for Molecular Property Prediction31 May 2022
- 2022Transferring Chemical and Energetic Knowledge Between Molecular Systems with Machine Learning6 May 2022
- 2022Learning Local Equivariant Representations for Large-Scale Atomistic Dynamics11 Apr 2022
- 2022GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generation6 Mar 2022
- 2022Equivariant Graph Attention Networks for Molecular Property Prediction20 Feb 2022
- 2022Unsupervised Learning of Group Invariant and Equivariant Representations15 Feb 2022
- 2021Relative Molecule Self-Attention Transformer12 Oct 2021
- 2021Geometric and Physical Quantities Improve E(3) Equivariant Message Passing6 Oct 2021
- 2021Applying Machine Learning to Study Fluid Mechanics5 Oct 2021
- 2021Federated Learning of Molecular Properties with Graph Neural Networks in a Heterogeneous Setting15 Sep 2021
- 2021Geometric Deep Learning on Molecular Representations26 Jul 2021
- 2021Rotation Invariant Graph Neural Networks using Spin Convolutions17 Jun 2021
- 2021Flexible dual-branched message passing neural network for quantum mechanical property prediction with molecular conformation14 Jun 2021
- 2021Optimal radial basis for density-based atomic representations18 May 2021
- 2021Learning Gradient Fields for Molecular Conformation Generation9 May 2021
- 2021E(n) Equivariant Graph Neural Networks19 Feb 2021
50 newest of 51 All 51 (JSON)
- 2022GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generationcited by 511
- 2025Adjoint Sampling: Highly Scalable Diffusion Samplers via Adjoint Matchingcited by 78
- 2024FlowLLM: Flow Matching for Material Generation with Large Language Models as Base Distributionscited by 52
- 2025SE(3)-Equivariant Diffusion Policy in Spherical Fourier Spacecited by 7
- 2023Ophiuchus: Scalable Modeling of Protein Structures through Hierarchical Coarse-graining SO(3)-Equivariant Autoencoderscited by 3
- 2023On Accelerating Diffusion-based Molecular Conformation Generation in SE(3)-invariant Spacecited by 0
- 2025SE(3)-Equivariant Diffusion Policy in Spherical Fourier Space2 Jul 2025
- 2025Adjoint Sampling: Highly Scalable Diffusion Samplers via Adjoint Matching16 Apr 2025
- 2024FlowLLM: Flow Matching for Material Generation with Large Language Models as Base Distributions30 Oct 2024
- 2023On Accelerating Diffusion-based Molecular Conformation Generation in SE(3)-invariant Space7 Oct 2023
- 2023Ophiuchus: Scalable Modeling of Protein Structures through Hierarchical Coarse-graining SO(3)-Equivariant Autoencoders4 Oct 2023
- 2022GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generation6 Mar 2022
- 2021E(n) Equivariant Graph Neural Networkscited by 951
- 2021Equivariant message passing for the prediction of tensorial properties and molecular spectracited by 438
- 2022Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphscited by 258
- 2022Learning Local Equivariant Representations for Large-Scale Atomistic Dynamicscited by 254
- 2021Geometric and Physical Quantities Improve E(3) Equivariant Message Passingcited by 225
- 2023EquiformerV2: Improved Equivariant Transformer for Scaling to Higher-Degree Representationscited by 201
- 2022e3nn: Euclidean Neural Networkscited by 171
- 2021Learning Gradient Fields for Molecular Conformation Generationcited by 162
- 2022Pre-training via Denoising for Molecular Property Predictioncited by 124
- 2021Geometric Deep Learning on Molecular Representationscited by 113
- 2024FlowMM: Generating Materials with Riemannian Flow Matchingcited by 105
- 2021Rotation Invariant Graph Neural Networks using Spin Convolutionscited by 52
12 most cited of 45 All 45 (JSON)
- 2026EquiformerV3: Scaling Efficient, Expressive, and General SE(3)-Equivariant Graph Attention Transformers10 Apr 2026
- 2026Explainable AI: Learning from the Learners9 Jan 2026
- 2025A 3D Machine Learning based Volume Of Fluid scheme without explicit interface reconstruction7 Jul 2025
- 2025Equivariant Spherical Transformer for Efficient Molecular Modeling29 May 2025
- 2025Permutation Equivariant Neural Networks for Symmetric Tensors14 Mar 2025
- 2024EquiJump: Protein Dynamics Simulation via SO(3)-Equivariant Stochastic Interpolants12 Oct 2024
- 2024Molecule Graph Networks with Many-body Equivariant Interactions19 Jun 2024
- 2024FlowMM: Generating Materials with Riemannian Flow Matching7 Jun 2024
- 2024Generalizing Denoising to Non-Equilibrium Structures Improves Equivariant Force Fields14 Mar 2024
- 2024Accelerating superconductor discovery through tempered deep learning of the electron-phonon spectral function29 Jan 2024
- 2023Diffusion-Driven Generative Framework for Molecular Conformation Prediction22 Dec 2023
- 2023Symmetry-enforcing neural networks with applications to constitutive modeling21 Dec 2023
12 newest of 45 All 45 (JSON)