HGPROMPT: Bridging Homogeneous and Heterogeneous Graphs for Few-shot Prompt Learning
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Abstract (arXiv)
Graph neural networks (GNNs) and heterogeneous graph neural networks (HGNNs) are prominent techniques for homogeneous and heterogeneous graph representation learning, yet their performance in an end-to-end supervised framework greatly depends on the availability of task-specific supervision. To reduce the labeling cost, pre-training on self-supervised pretext tasks has become a popular paradigm,but there is often a gap between the pre-trained model and downstream tasks, stemming from the divergence in their objectives. To bridge the gap, prompt learning has risen as a promising direction especially in few-shot settings, without the need to fully fine-tune the pre-trained model. While there has been some early exploration of prompt-based learning on graphs, they primarily deal with homogeneous graphs, ignoring the heterogeneous graphs that are prevalent in downstream applications. In this paper, we propose HGPROMPT, a novel pre-training and prompting framework to unify not only pre-training and downstream tasks but also homogeneous and heterogeneous graphs via a dual-template design. Moreover, we propose dual-prompt in HGPROMPT to assist a downstream task in locating the most relevant prior to bridge the gaps caused by not only feature variations but also heterogeneity differences across tasks. Finally, we thoroughly evaluate and analyze HGPROMPT through extensive experiments on three public datasets.
Key facts. Cited by 45 papers in the map (data through 14 Oct 2026). Builds on 21 of its 36 references that are in the map. First posted on arXiv 4 Dec 2023.
Builds on
21 of 36 references.
References · 21
- 2020Language Models are Few-Shot Learnerscited by 32,419
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,361
- 2017Graph Attention Networkscited by 8,923
- 2017Inductive Representation Learning on Large Graphscited by 6,320
- 2017Model-Agnostic Meta-Learning for Fast Adaptation of Deep Networkscited by 4,897
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- 2016Variational Graph Auto-Encoderscited by 1,382
- 2020Graph Contrastive Learning with Augmentationscited by 1,208
- 2018Deep Graph Infomaxcited by 1,106
- 2019Strategies for Pre-training Graph Neural Networkscited by 971
- 2019Heterogeneous Graph Attention Networkcited by 734
- 2019Unified Language Model Pre-training for Natural Language Understanding and Generationcited by 670
9 more
- 2020GCC: Graph Contrastive Coding for Graph Neural Network Pre-Trainingcited by 463
- 2021Are we really making much progress? Revisiting, benchmarking, and refining heterogeneous graph neural networkscited by 176
- 2021Self-supervised Heterogeneous Graph Neural Network with Co-contrastive Learningcited by 130
- 2019Meta-GNN: On Few-shot Node Classification in Graph Meta-learningcited by 105
- 2023Virtual Node Tuning for Few-shot Node Classificationcited by 46
- 2023Generalized Graph Prompt: Toward a Unification of Pre-Training and Downstream Tasks on Graphscited by 39
- 2020Self-supervised Auxiliary Learning with Meta-paths for Heterogeneous Graphscited by 38
- 2022Self-supervised Heterogeneous Graph Pre-training Based on Structural Clusteringcited by 30
- 2023The Snowflake Hypothesis: Training Deep GNN with One Node One Receptive fieldcited by 11
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Citing papers per year: 2024: 16; 2025: 14; 2026: 15.
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- 2025SAMGPT: Text-free Graph Foundation Model for Multi-domain Pre-training and Cross-domain Adaptationcited by 62
- 2024Non-Homophilic Graph Pre-Training and Prompt Learningcited by 31
- 2024EXGC: Bridging Efficiency and Explainability in Graph Condensationcited by 20
- 2025Edge Prompt Tuning for Graph Neural Networkscited by 18
- 2024Prompt Learning on Temporal Interaction Graphscited by 13
- 2025GRAVER: Generative Graph Vocabularies for Robust Graph Foundation Models Fine-tuningcited by 13
- 2024Node-Time Conditional Prompt Learning In Dynamic Graphscited by 11
- 2025DAGPrompT: Pushing the Limits of Graph Prompting with a Distribution-aware Graph Prompt Tuning Approachcited by 11
- 2025LLM-Empowered Class Imbalanced Graph Prompt Learning for Online Drug Trafficking Detectioncited by 11
- 2025One Prompt Fits All: Universal Graph Adaptation for Pretrained Modelscited by 11
- 2024A Survey on Self-Supervised Graph Foundation Models: Knowledge-Based Perspectivecited by 9
- 2025GCoT: Chain-of-Thought Prompt Learning for Graphscited by 9
33 more
- 2024Urban Region Pre-training and Prompting: A Graph-based Approachcited by 8
- 2024DDIPrompt: Drug-Drug Interaction Event Prediction based on Graph Prompt Learningcited by 7
- 2024GPT4Rec: Graph Prompt Tuning for Streaming Recommendationcited by 7
- 2024Revisiting Self-Supervised Heterogeneous Graph Learning from Spectral Clustering Perspectivecited by 7
- 2024A Survey of Few-Shot Learning on Graphs: from Meta-Learning to Pre-Training and Prompt Learningcited by 6
- 2024SGPT: Few-Shot Prompt Tuning for Signed Graphscited by 6
- 2026Multi-Domain Riemannian Graph Gluing for Building Graph Foundation Modelscited by 5
- 2025HGMP:Heterogeneous Graph Multi-Task Prompt Learningcited by 4
- 2026RAG-GFM: Overcoming In-Memory Bottlenecks in Graph Foundation Models via Retrieval-Augmented Generationcited by 4
- 2024Reliable and Compact Graph Fine-tuning via GraphSparse Promptingcited by 3
- 2024A Unified Graph Selective Prompt Learning for Graph Neural Networkscited by 2
- 2024Are You Using Reliable Graph Prompts? Trojan Prompt Attacks on Graph Neural Networkscited by 2
- 2024HG-Adapter: Improving Pre-Trained Heterogeneous Graph Neural Networks with Dual Adapterscited by 2
- 2025Towards Efficient LLM-aware Heterogeneous Graph Learningcited by 2
- 2026Data-centric Prompt Tuning for Dynamic Graphscited by 2
- 2026Unified Multi-Domain Graph Pre-training for Homogeneous and Heterogeneous Graphs via Domain-Specific Expert Encodingcited by 2
- 2026Dynamic Graph Prompting via Topology-Routed Mixed-Curvature Expertscited by 2
- 2024Towards Graph Prompt Learning: A Survey and Beyondcited by 1
- 2025Heterogeneous Graph Prompt Learning via Adaptive Weight Pruningcited by 1
- 2026Empowering Heterogeneous Graph Foundation Models via Decoupled Relation Alignmentcited by 1
- 2026Decoupled and Divergence-Conditioned Prompt for Multi-domain Dynamic Graph Foundation Modelscited by 1
- 2026CHoE: Cross-Domain Heterogeneous Graph Prompt Learning via Structure-Conditioned Expertscited by 1
- 2025Meta-Semantics Augmented Few-Shot Relational Learningcited by 0
- 2025Cross-Paradigm Graph Backdoor Attacks with Promptable Subgraph Triggerscited by 0
- 2025Towards Fair Graph Prompting: A Dual-Prompt Mechanism for Mitigating Attribute and Structural Biascited by 0
- 2025THeGAU: Type-Aware Heterogeneous Graph Autoencoder and Augmentationcited by 0
- 2026GP2F: Cross-Domain Graph Prompting with Adaptive Fusion of Pre-trained Graph Neural Networkscited by 0
- 2026CrossHGL: A Text-Free Foundation Model for Cross-Domain Heterogeneous Graph Learningcited by 0
- 2026A Cross-graph Tuning-free GNN Prompting Frameworkcited by 0
- 2026A Unified Graph Language Model for Multi-Domain Multi-Task Graph Alignment Instruction Tuningcited by 0
- 2026Model Agnostic Graph Prompt Learning for Crystal Property Predictioncited by 0
- 2026Preserving Geometric Integrity in Graph Prompting via Measure-Constrained Optimal Transportcited by 0
- 2026Spectral Reversal: Counteracting Singular Value Bias for Graph Promptingcited by 0
- 2026Spectral Reversal: Counteracting Singular Value Bias for Graph Prompting26 Sep 2026
- 2026Preserving Geometric Integrity in Graph Prompting via Measure-Constrained Optimal Transport20 Sep 2026
- 2026Dynamic Graph Prompting via Topology-Routed Mixed-Curvature Experts6 Aug 2026
- 2026Model Agnostic Graph Prompt Learning for Crystal Property Prediction9 Jul 2026
- 2026CHoE: Cross-Domain Heterogeneous Graph Prompt Learning via Structure-Conditioned Experts15 May 2026
- 2026Decoupled and Divergence-Conditioned Prompt for Multi-domain Dynamic Graph Foundation Models13 May 2026
- 2026A Unified Graph Language Model for Multi-Domain Multi-Task Graph Alignment Instruction Tuning12 May 2026
- 2026Empowering Heterogeneous Graph Foundation Models via Decoupled Relation Alignment1 May 2026
- 2026A Cross-graph Tuning-free GNN Prompting Framework1 Apr 2026
- 2026CrossHGL: A Text-Free Foundation Model for Cross-Domain Heterogeneous Graph Learning29 Mar 2026
- 2026Multi-Domain Riemannian Graph Gluing for Building Graph Foundation Models28 Feb 2026
- 2026Unified Multi-Domain Graph Pre-training for Homogeneous and Heterogeneous Graphs via Domain-Specific Expert Encoding13 Feb 2026
33 more
- 2026GP2F: Cross-Domain Graph Prompting with Adaptive Fusion of Pre-trained Graph Neural Networks12 Feb 2026
- 2026RAG-GFM: Overcoming In-Memory Bottlenecks in Graph Foundation Models via Retrieval-Augmented Generation21 Jan 2026
- 2026Data-centric Prompt Tuning for Dynamic Graphs17 Jan 2026
- 2025THeGAU: Type-Aware Heterogeneous Graph Autoencoder and Augmentation11 Dec 2025
- 2025Towards Efficient LLM-aware Heterogeneous Graph Learning22 Nov 2025
- 2025GRAVER: Generative Graph Vocabularies for Robust Graph Foundation Models Fine-tuning5 Nov 2025
- 2025Towards Fair Graph Prompting: A Dual-Prompt Mechanism for Mitigating Attribute and Structural Bias27 Oct 2025
- 2025Cross-Paradigm Graph Backdoor Attacks with Promptable Subgraph Triggers26 Oct 2025
- 2025One Prompt Fits All: Universal Graph Adaptation for Pretrained Models26 Sep 2025
- 2025Heterogeneous Graph Prompt Learning via Adaptive Weight Pruning12 Jul 2025
- 2025HGMP:Heterogeneous Graph Multi-Task Prompt Learning10 Jul 2025
- 2025Meta-Semantics Augmented Few-Shot Relational Learning8 May 2025
- 2025Edge Prompt Tuning for Graph Neural Networks2 Mar 2025
- 2025LLM-Empowered Class Imbalanced Graph Prompt Learning for Online Drug Trafficking Detection28 Feb 2025
- 2025GCoT: Chain-of-Thought Prompt Learning for Graphs12 Feb 2025
- 2025SAMGPT: Text-free Graph Foundation Model for Multi-domain Pre-training and Cross-domain Adaptation8 Feb 2025
- 2025DAGPrompT: Pushing the Limits of Graph Prompting with a Distribution-aware Graph Prompt Tuning Approach25 Jan 2025
- 2024SGPT: Few-Shot Prompt Tuning for Signed Graphs11 Dec 2024
- 2024Revisiting Self-Supervised Heterogeneous Graph Learning from Spectral Clustering Perspective1 Dec 2024
- 2024HG-Adapter: Improving Pre-Trained Heterogeneous Graph Neural Networks with Dual Adapters2 Nov 2024
- 2024Reliable and Compact Graph Fine-tuning via GraphSparse Prompting29 Oct 2024
- 2024Are You Using Reliable Graph Prompts? Trojan Prompt Attacks on Graph Neural Networks17 Oct 2024
- 2024Towards Graph Prompt Learning: A Survey and Beyond26 Aug 2024
- 2024Non-Homophilic Graph Pre-Training and Prompt Learning22 Aug 2024
- 2024Urban Region Pre-training and Prompting: A Graph-based Approach12 Aug 2024
- 2024A Unified Graph Selective Prompt Learning for Graph Neural Networks15 Jun 2024
- 2024GPT4Rec: Graph Prompt Tuning for Streaming Recommendation12 Jun 2024
- 2024Node-Time Conditional Prompt Learning In Dynamic Graphs22 May 2024
- 2024A Survey on Self-Supervised Graph Foundation Models: Knowledge-Based Perspective24 Mar 2024
- 2024DDIPrompt: Drug-Drug Interaction Event Prediction based on Graph Prompt Learning18 Feb 2024
- 2024Prompt Learning on Temporal Interaction Graphs9 Feb 2024
- 2024EXGC: Bridging Efficiency and Explainability in Graph Condensation5 Feb 2024
- 2024A Survey of Few-Shot Learning on Graphs: from Meta-Learning to Pre-Training and Prompt Learning2 Feb 2024
- 2025GCoT: Chain-of-Thought Prompt Learning for Graphscited by 9
- 2025GCoT: Chain-of-Thought Prompt Learning for Graphs12 Feb 2025
- 2025SAMGPT: Text-free Graph Foundation Model for Multi-domain Pre-training and Cross-domain Adaptationcited by 62
- 2024Non-Homophilic Graph Pre-Training and Prompt Learningcited by 31
- 2024EXGC: Bridging Efficiency and Explainability in Graph Condensationcited by 20
- 2025Edge Prompt Tuning for Graph Neural Networkscited by 18
- 2024Prompt Learning on Temporal Interaction Graphscited by 13
- 2025GRAVER: Generative Graph Vocabularies for Robust Graph Foundation Models Fine-tuningcited by 13
- 2024Node-Time Conditional Prompt Learning In Dynamic Graphscited by 11
- 2025DAGPrompT: Pushing the Limits of Graph Prompting with a Distribution-aware Graph Prompt Tuning Approachcited by 11
- 2025LLM-Empowered Class Imbalanced Graph Prompt Learning for Online Drug Trafficking Detectioncited by 11
- 2025One Prompt Fits All: Universal Graph Adaptation for Pretrained Modelscited by 11
- 2024A Survey on Self-Supervised Graph Foundation Models: Knowledge-Based Perspectivecited by 9
- 2024Urban Region Pre-training and Prompting: A Graph-based Approachcited by 8
12 most cited of 43 All 43 (JSON)
- 2026Spectral Reversal: Counteracting Singular Value Bias for Graph Prompting26 Sep 2026
- 2026Preserving Geometric Integrity in Graph Prompting via Measure-Constrained Optimal Transport20 Sep 2026
- 2026Dynamic Graph Prompting via Topology-Routed Mixed-Curvature Experts6 Aug 2026
- 2026Model Agnostic Graph Prompt Learning for Crystal Property Prediction9 Jul 2026
- 2026CHoE: Cross-Domain Heterogeneous Graph Prompt Learning via Structure-Conditioned Experts15 May 2026
- 2026Decoupled and Divergence-Conditioned Prompt for Multi-domain Dynamic Graph Foundation Models13 May 2026
- 2026A Unified Graph Language Model for Multi-Domain Multi-Task Graph Alignment Instruction Tuning12 May 2026
- 2026Empowering Heterogeneous Graph Foundation Models via Decoupled Relation Alignment1 May 2026
- 2026A Cross-graph Tuning-free GNN Prompting Framework1 Apr 2026
- 2026CrossHGL: A Text-Free Foundation Model for Cross-Domain Heterogeneous Graph Learning29 Mar 2026
- 2026Multi-Domain Riemannian Graph Gluing for Building Graph Foundation Models28 Feb 2026
- 2026Unified Multi-Domain Graph Pre-training for Homogeneous and Heterogeneous Graphs via Domain-Specific Expert Encoding13 Feb 2026
12 newest of 43 All 43 (JSON)