Grand canonical generative diffusion model for crystalline phases and grain boundaries
On the map: Diffusion models → Flow matching, time series and science
Abstract (arXiv)
The diffusion model has emerged as a powerful tool for generating atomic structures for materials science. This work calls attention to the deficiency of current particle-based diffusion models, which represent atoms as a point cloud, in generating even the simplest ordered crystalline structures. The problem is attributed to particles being trapped in local minima during the score-driven simulated annealing of the diffusion process, similar to the physical process of force-driven simulated annealing. We develop a solution, the grand canonical diffusion model, which adopts an alternative voxel-based representation with continuous rather than fixed number of particles. The method is applied towards generation of several common crystalline phases as well as the technologically important and challenging problem of grain boundary structures.
Key facts. Cited by 1 paper in the map (data through 7 Oct 2026). Placed in Flow matching, time series and science, one of 14 directions in Diffusion models. Builds on 28 of its 62 references that are in the map. First posted on arXiv 28 Aug 2024.
Builds on
28 of 62 references.
Closest ancestors · 7
Same direction, newest first
- 2023Score dynamics: scaling molecular dynamics with picoseconds timestep via conditional diffusion model2 Oct
- 2023Diffusion probabilistic models enhance variational autoencoder for crystal structure generative modeling4 Aug
- 2023Crystal Structure Prediction by Joint Equivariant Diffusion30 Jul
- 2023EigenFold: Generative Protein Structure Prediction with Diffusion Models5 Apr
- 2022Protein structure generation via folding diffusion30 Sep
- 2022Equivariant Diffusion for Molecule Generation in 3D31 Mar
- 2022GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generation6 Mar
Other references · 21
- 2020Denoising Diffusion Probabilistic Modelscited by 20,851
- 2020Score-Based Generative Modeling through Stochastic Differential Equationscited by 8,964
- 2015Deep Unsupervised Learning using Nonequilibrium Thermodynamicscited by 7,005
- 2019Generative Modeling by Estimating Gradients of the Data Distributioncited by 4,067
- 2016Gaussian Error Linear Units (GELUs)cited by 3,431
- 2020Fourier Features Let Networks Learn High Frequency Functions in Low Dimensional Domainscited by 2,170
- 2022DPM-Solver: A Fast ODE Solver for Diffusion Probabilistic Model Sampling in Around 10 Stepscited by 1,961
- 2021Palette: Image-to-Image Diffusion Modelscited by 1,296
- 2022Diffusion Models: A Comprehensive Survey of Methods and Applicationscited by 1,107
- 2020Learning Mesh-Based Simulation with Graph Networkscited by 840
- 2022DiffDock: Diffusion Steps, Twists, and Turns for Molecular Dockingcited by 307
- 2021Crystal Diffusion Variational Autoencoder for Periodic Material Generationcited by 268
9 more
- 2022Torsional Diffusion for Molecular Conformer Generationcited by 262
- 2021Score-Based Generative Modeling with Critically-Damped Langevin Diffusioncited by 230
- 2023MatterGen: a generative model for inorganic materials designcited by 98
- 2023Restart Sampling for Improving Generative Processescited by 81
- 2023Scalable Diffusion for Materials Generationcited by 52
- 20233D molecule generation by denoising voxel gridscited by 38
- 2023Accurate transition state generation with an object-aware equivariant elementary reaction diffusion modelcited by 30
- 2023Spectroscopy-Guided Discovery of Three-Dimensional Structures of Disordered Materials with Diffusion Modelscited by 8
- 2023Learning dislocation dynamics mobility laws from large-scale MD simulationscited by 4
Built on by
Citing papers per year: 2026: 1.
1 paper.
- 2026Grand Canonical Generatorscited by 0
- 2026Grand Canonical Generators30 Sep 2026
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