GraphCare: Enhancing Healthcare Predictions with Personalized Knowledge Graphs
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Abstract (arXiv)
Clinical predictive models often rely on patients' electronic health records (EHR), but integrating medical knowledge to enhance predictions and decision-making is challenging. This is because personalized predictions require personalized knowledge graphs (KGs), which are difficult to generate from patient EHR data. To address this, we propose textscGraphCare, an open-world framework that uses external KGs to improve EHR-based predictions. Our method extracts knowledge from large language models (LLMs) and external biomedical KGs to build patient-specific KGs, which are then used to train our proposed Bi-attention AugmenTed (BAT) graph neural network (GNN) for healthcare predictions. On two public datasets, MIMIC-III and MIMIC-IV, textscGraphCare surpasses baselines in four vital healthcare prediction tasks: mortality, readmission, length of stay (LOS), and drug recommendation. On MIMIC-III, it boosts AUROC by 17.6% and 6.6% for mortality and readmission, and F1-score by 7.9% and 10.8% for LOS and drug recommendation, respectively. Notably, textscGraphCare demonstrates a substantial edge in scenarios with limited data availability. Our findings highlight the potential of using external KGs in healthcare prediction tasks and demonstrate the promise of textscGraphCare in generating personalized KGs for promoting personalized medicine.
Key facts. Cited by 58 papers in the map (data through 14 Oct 2026). Builds on 50 of its 91 references that are in the map. First posted on arXiv 22 May 2023.
Builds on
50 of 91 references.
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Citing papers per year: 2024: 12; 2025: 23; 2026: 23.
58 papers.
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- 2026Learning to Select Source-Traceable Evidence for Language-Model Prediction from Irregular Clinical Time Series19 May 2026
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- 2026Text-Attributed Knowledge Graph Enrichment with Large Language Models for Medical Concept Representation14 Apr 2026
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- 2026Efficient and Effective Internal Memory Retrieval for LLM-Based Healthcare Prediction8 Apr 2026
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- 2026User-Adaptive Meta-Learning for Cold-Start Medication Recommendation with Uncertainty Filtering30 Jan 2026
- 2026EHR-RAG: Bridging Long-Horizon Structured Electronic Health Records and Large Language Models via Enhanced Retrieval-Augmented Generation29 Jan 2026
- 2026ReToP: Learning to Rewrite Electronic Health Records for Clinical Prediction27 Jan 2026
- 2026What Drives Length of Stay After Elective Spine Surgery? Insights from a Decade of Predictive Modeling24 Jan 2026
- 2025Uncertainty-Aware Dynamic Knowledge Graphs for Reliable Question Answering26 Dec 2025
- 2025Self-Ensemble Post Learning for Noisy Domain Generalization11 Dec 2025
- 2025Beyond Traditional Diagnostics: Transforming Patient-Side Information into Predictive Insights with Knowledge Graphs and Prototypes9 Dec 2025
- 2025Early Risk Prediction with Temporally and Contextually Grounded Clinical Language Processing27 Nov 2025
- 2025Grounded by Experience: Generative Healthcare Prediction Augmented with Hierarchical Agentic Retrieval17 Nov 2025
- 2025Towards Fair Graph Prompting: A Dual-Prompt Mechanism for Mitigating Attribute and Structural Bias27 Oct 2025
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- 2025Structure-aware Hypergraph Transformer for Diagnosis Prediction in Electronic Health Records28 Aug 2025
- 2025ProtoEHR: Hierarchical Prototype Learning for EHR-based Healthcare Predictions23 Aug 2025
- 2025Toward Better EHR Reasoning in LLMs: Reinforcement Learning with Expert Attention Guidance19 Aug 2025
- 2025Improving Hospital Risk Prediction with Knowledge-Augmented Multimodal EHR Modeling4 Aug 2025
- 2025HypKG: Hypergraph-based Knowledge Graph Contextualization for Precision Healthcare26 Jul 2025
- 2025DiaLLMs: EHR Enhanced Clinical Conversational System for Clinical Test Recommendation and Diagnosis Prediction24 Jun 2025
- 2025CKD-EHR:Clinical Knowledge Distillation for Electronic Health Records18 Jun 2025
- 2025Discovering Hierarchy-Grounded Domains with Adaptive Granularity for Clinical Domain Generalization8 Jun 2025
- 2025No Black Boxes: Interpretable and Interactable Predictive Healthcare with Knowledge-Enhanced Agentic Causal Discovery22 May 2025
- 2025Diffmv: A Unified Diffusion Framework for Healthcare Predictions with Random Missing Views and View Laziness17 May 2025
- 2025Reviewing Clinical Knowledge in Medical Large Language Models: Training and Beyond28 Feb 2025
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- 2025Unveiling Discrete Clues: Superior Healthcare Predictions for Rare Diseases23 Jan 2025
- 2024MedG-KRP: Medical Graph Knowledge Representation Probing14 Dec 2024
- 2024MPLite: Multi-Aspect Pretraining for Mining Clinical Health Records17 Nov 2024
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- 2024Bridging Stepwise Lab-Informed Pretraining and Knowledge-Guided Learning for Diagnostic Reasoning25 Oct 2024
50 newest of 58 All 58 (JSON)
- 2024GenRES: Rethinking Evaluation for Generative Relation Extraction in the Era of Large Language Modelscited by 7
- 2024Bridging Stepwise Lab-Informed Pretraining and Knowledge-Guided Learning for Diagnostic Reasoningcited by 3
- 2025Toward Better EHR Reasoning in LLMs: Reinforcement Learning with Expert Attention Guidancecited by 3
- 2026CLR-voyance: Reinforcing Open-Ended Reasoning for Inpatient Clinical Decision Support with Outcome-Aware Rubricscited by 3
- 2026EviCare: Enhancing Diagnosis Prediction with Deep Model-Guided Evidence for In-Context Reasoningcited by 0
- 2026LogosKG: Hardware-Optimized Scalable and Interpretable Knowledge Graph Retrievalcited by 0
- 2026CLR-voyance: Reinforcing Open-Ended Reasoning for Inpatient Clinical Decision Support with Outcome-Aware Rubrics10 May 2026
- 2026LogosKG: Hardware-Optimized Scalable and Interpretable Knowledge Graph Retrieval20 Apr 2026
- 2026EviCare: Enhancing Diagnosis Prediction with Deep Model-Guided Evidence for In-Context Reasoning12 Apr 2026
- 2025Toward Better EHR Reasoning in LLMs: Reinforcement Learning with Expert Attention Guidance19 Aug 2025
- 2024Bridging Stepwise Lab-Informed Pretraining and Knowledge-Guided Learning for Diagnostic Reasoning25 Oct 2024
- 2024GenRES: Rethinking Evaluation for Generative Relation Extraction in the Era of Large Language Models16 Feb 2024
- 2024ColaCare: Enhancing Electronic Health Record Modeling through Large Language Model-Driven Multi-Agent Collaborationcited by 23
- 2025No Black Boxes: Interpretable and Interactable Predictive Healthcare with Knowledge-Enhanced Agentic Causal Discoverycited by 5
- 2025MedCoAct: Confidence-Aware Multi-Agent Collaboration for Complete Clinical Decisioncited by 1
- 2025Grounded by Experience: Generative Healthcare Prediction Augmented with Hierarchical Agentic Retrievalcited by 1
- 2026Role-Specialized Mixture-of-Agents with Open-Weight LLMs for Clinical Predictioncited by 0
- 2026Role-Specialized Mixture-of-Agents with Open-Weight LLMs for Clinical Prediction23 Aug 2026
- 2025Grounded by Experience: Generative Healthcare Prediction Augmented with Hierarchical Agentic Retrieval17 Nov 2025
- 2025MedCoAct: Confidence-Aware Multi-Agent Collaboration for Complete Clinical Decision12 Oct 2025
- 2025No Black Boxes: Interpretable and Interactable Predictive Healthcare with Knowledge-Enhanced Agentic Causal Discovery22 May 2025
- 2024ColaCare: Enhancing Electronic Health Record Modeling through Large Language Model-Driven Multi-Agent Collaboration3 Oct 2024
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- 2026EHR-RAG: Bridging Long-Horizon Structured Electronic Health Records and Large Language Models via Enhanced Retrieval-Augmented Generation29 Jan 2026
- 2024Graphusion: A RAG Framework for Knowledge Graph Construction with a Global Perspective23 Oct 2024
- 2024EMERGE: Enhancing Multimodal Electronic Health Records Predictive Modeling with Retrieval-Augmented Generation27 May 2024
- 2024ClinicalBench: Can LLMs Beat Traditional ML Models in Clinical Prediction?cited by 32
- 2024KG-FIT: Knowledge Graph Fine-Tuning Upon Open-World Knowledgecited by 16
- 2025Multimodal Medical Code Tokenizercited by 14
- 2024Predictive Modeling with Temporal Graphical Representation on Electronic Health Recordscited by 9
- 2025HypKG: Hypergraph-based Knowledge Graph Contextualization for Precision Healthcarecited by 9
- 2024SMART: Towards Pre-trained Missing-Aware Model for Patient Health Status Predictioncited by 8
- 2025A Survey on Retrieval And Structuring Augmented Generation with Large Language Modelscited by 8
- 2025Unveiling Discrete Clues: Superior Healthcare Predictions for Rare Diseasescited by 5
- 2025Multi-Ontology Integration with Dual-Axis Propagation for Medical Concept Representationcited by 4
- 2025Discovering Hierarchy-Grounded Domains with Adaptive Granularity for Clinical Domain Generalizationcited by 3
- 2024MedG-KRP: Medical Graph Knowledge Representation Probingcited by 2
- 2025Diffmv: A Unified Diffusion Framework for Healthcare Predictions with Random Missing Views and View Lazinesscited by 2
12 most cited of 42 All 42 (JSON)
- 2026RASPER: Reward-Aligned Summarization of Clinical Notes for EHR Outcome Prediction2 Oct 2026
- 2026REFINE: LLM Refinement over Budgeted Text-Attributed Graphs for Personalized Medical Concept Representation3 Sep 2026
- 2026Import What You Need: Learning When and How to Augment EHR Graphs with External Knowledge1 Sep 2026
- 2026Patients-like-me: A Variational LM--GNN Framework for Explainable Clinical Prediction4 Aug 2026
- 2026HERMES: Contrast-Aware Knowledge Graph Reasoning from Clinical Notes for Patient Outcome Prediction22 Jul 2026
- 2026Personal Care Utility: Health as Everyday Infrastructure12 Jun 2026
- 2026HoT-SSM:Higher-order Temporal Knowledge Graph Reasoning with State Space Models for Health Care4 Jun 2026
- 2026Trajectory-Aware Clinical Risk Prediction via Severity-Grounded Knowledge Graphs and Retrieval-Augmented Generation2 Jun 2026
- 2026GraD-IBD: Graph Representation Learning from Diagnosis Trajectories for Early Detection of Inflammatory Bowel Disease27 May 2026
- 2026Learning to Select Source-Traceable Evidence for Language-Model Prediction from Irregular Clinical Time Series19 May 2026
- 2026RePrompT: Recurrent Prompt Tuning for Integrating Structured EHR Encoders with Large Language Models20 Apr 2026
- 2026Text-Attributed Knowledge Graph Enrichment with Large Language Models for Medical Concept Representation14 Apr 2026
12 newest of 42 All 42 (JSON)