Efficient Aggregated Kernel Tests using Incomplete U-statistics
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Abstract (arXiv)
We propose a series of computationally efficient nonparametric tests for the two-sample, independence, and goodness-of-fit problems, using the Maximum Mean Discrepancy (MMD), Hilbert Schmidt Independence Criterion (HSIC), and Kernel Stein Discrepancy (KSD), respectively. Our test statistics are incomplete U-statistics, with a computational cost that interpolates between linear time in the number of samples, and quadratic time, as associated with classical U-statistic tests. The three proposed tests aggregate over several kernel bandwidths to detect departures from the null on various scales: we call the resulting tests MMDAggInc, HSICAggInc and KSDAggInc. This procedure provides a solution to the fundamental kernel selection problem as we can aggregate a large number of kernels with several bandwidths without incurring a significant loss of test power. For the test thresholds, we derive a quantile bound for wild bootstrapped incomplete U-statistics, which is of independent interest. We derive non-asymptotic uniform separation rates for MMDAggInc and HSICAggInc, and quantify exactly the trade-off between computational efficiency and the attainable rates: this result is novel for tests based on incomplete U-statistics, to our knowledge. We further show that in the quadratic-time case, the wild bootstrap incurs no penalty to test power over the more widespread permutation-based approach, since both attain the same minimax optimal rates (which in turn match the rates that use oracle quantiles). We support our claims with numerical experiments on the trade-off between computational efficiency and test power. In all three testing frameworks, the linear-time versions of our proposed tests perform at least as well as the current linear-time state-of-the-art tests.
Key facts. Cited by 27 papers in the map (data through 14 Oct 2026). Builds on 31 of its 95 references that are in the map. First posted on arXiv 18 Jun 2022.
Builds on
31 of 95 references.
References · 31
- 2014Adam: A Method for Stochastic Optimizationcited by 37,240
- 2016Density estimation using Real NVPcited by 2,042
- 2018Glow: Generative Flow with Invertible 1x1 Convolutionscited by 1,545
- 2016A Kernelized Stein Discrepancy for Goodness-of-fit Tests and Model Evaluationcited by 236
- 2016A Kernel Test of Goodness of Fitcited by 143
- 2017Measuring Sample Quality with Kernelscited by 119
- 2016Generative Models and Model Criticism via Optimized Maximum Mean Discrepancycited by 100
- 2013Exact post-selection inference, with application to the lassocited by 91
- 2021MMD Aggregated Two-Sample Testcited by 75
- 2014Optimal Inference After Model Selectioncited by 67
- 2016Interpretable Distribution Features with Maximum Testing Powercited by 63
- 2015Fast Two-Sample Testing with Analytic Representations of Probability Measurescited by 53
19 more
- 2017A Linear-Time Kernel Goodness-of-Fit Testcited by 41
- 2016Large-Scale Kernel Methods for Independence Testingcited by 32
- 2014A Wild Bootstrap for Degenerate Kernel Testscited by 29
- 2018Random Feature Stein Discrepanciescited by 23
- 2021A Witness Two-Sample Testcited by 23
- 2019On the Optimality of Gaussian Kernel Based Nonparametric Tests against Smooth Alternativescited by 21
- 2022KSD Aggregated Goodness-of-fit Testcited by 21
- 2017On the Optimality of Kernel-Embedding Based Goodness-of-Fit Testscited by 19
- 2020Learning Kernel Tests Without Data Splittingcited by 19
- 2014FastMMD: Ensemble of Circular Discrepancy for Efficient Two-Sample Testcited by 17
- 2021Composite Goodness-of-fit Tests with Kernelscited by 16
- 2016Post Selection Inference with Kernelscited by 13
- 2016An Adaptive Test of Independence with Analytic Kernel Embeddingscited by 13
- 2018Post Selection Inference with Incomplete Maximum Mean Discrepancy Estimatorcited by 11
- 2015A simpler condition for consistency of a kernel independence testcited by 10
- 2019Kernel Stein Tests for Multiple Model Comparisoncited by 9
- 2019More Powerful Selective Kernel Tests for Feature Selectioncited by 6
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- 2020Post-selection inference with HSIC-Lassocited by 4
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Citing papers per year: 2022: 3; 2023: 7; 2024: 4; 2025: 11; 2026: 2.
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- 2023MMD-FUSE: Learning and Combining Kernels for Two-Sample Testing Without Data Splittingcited by 33
- 2024Practical Kernel Tests of Conditional Independencecited by 15
- 2022Subspace Recovery from Heterogeneous Data with Non-isotropic Noisecited by 14
- 2023Compress Then Test: Powerful Kernel Testing in Near-linear Timecited by 14
- 2025A Practical Introduction to Kernel Discrepancies: MMD, HSIC & KSDcited by 13
- 2023A Bias-Variance-Covariance Decomposition of Kernel Scores for Generative Modelscited by 8
- 2023Variable Selection for Kernel Two-Sample Testscited by 7
- 2024Robust Kernel Hypothesis Testing under Data Corruptioncited by 7
- 2025A Scalable Nystrom-Based Kernel Two-Sample Test with Permutationscited by 6
- 2025DUAL: Learning Diverse Kernels for Aggregated Two-sample and Independence Testingcited by 6
- 2023Nystr"om M-Hilbert-Schmidt Independence Criterioncited by 5
- 2025A Unified View of Optimal Kernel Hypothesis Testingcited by 5
15 more
- 2024Statistical and Computational Guarantees of Kernel Max-Sliced Wasserstein Distancescited by 4
- 2024Nystr"om Kernel Stein Discrepancycited by 4
- 2023A Semi-Bayesian Nonparametric Estimator of the Maximum Mean Discrepancy Measure: Applications in Goodness-of-Fit Testing and Generative Adversarial Networkscited by 3
- 2022A general framework for the analysis of kernel-based testscited by 2
- 2025Optimal Online Change Detection via Random Fourier Featurescited by 2
- 2026Regularized f-Divergence Kernel Testscited by 2
- 2025Prior shift estimation for positive unlabeled data through the lens of kernel embeddingcited by 1
- 2025Beyond Basic A/B testing: Improving Statistical Efficiency for Business Growthcited by 1
- 2025Anchor-based Maximum Discrepancy for Relative Similarity Testingcited by 1
- 2025Kernel-Based Evaluation of Conditional Biological Sequence Modelscited by 1
- 2022Discussion of `Multiscale Fisher's Independence Test for Multivariate Dependence'cited by 0
- 2023Partial identification of kernel based two sample tests with mismeasured datacited by 0
- 2025Kernel Quantile Embeddings and Associated Probability Metricscited by 0
- 2025Are Two Datasets Close Enough With Statistical Significance? A Kernel Distributional Closeness Testing Approachcited by 0
- 2026USAD: Uncertainty-aware Statistical Adversarial Detectioncited by 0
- 2026USAD: Uncertainty-aware Statistical Adversarial Detection26 Jun 2026
- 2026Regularized f-Divergence Kernel Tests27 Jan 2026
- 2025Kernel-Based Evaluation of Conditional Biological Sequence Models17 Oct 2025
- 2025DUAL: Learning Diverse Kernels for Aggregated Two-sample and Independence Testing13 Oct 2025
- 2025Anchor-based Maximum Discrepancy for Relative Similarity Testing12 Oct 2025
- 2025Are Two Datasets Close Enough With Statistical Significance? A Kernel Distributional Closeness Testing Approach17 Jul 2025
- 2025Kernel Quantile Embeddings and Associated Probability Metrics26 May 2025
- 2025Optimal Online Change Detection via Random Fourier Features23 May 2025
- 2025Beyond Basic A/B testing: Improving Statistical Efficiency for Business Growth13 May 2025
- 2025A Unified View of Optimal Kernel Hypothesis Testing10 Mar 2025
- 2025A Practical Introduction to Kernel Discrepancies: MMD, HSIC & KSD4 Mar 2025
- 2025Prior shift estimation for positive unlabeled data through the lens of kernel embedding28 Feb 2025
15 more
- 2025A Scalable Nystrom-Based Kernel Two-Sample Test with Permutations19 Feb 2025
- 2024Nystr"om Kernel Stein Discrepancy12 Jun 2024
- 2024Robust Kernel Hypothesis Testing under Data Corruption30 May 2024
- 2024Statistical and Computational Guarantees of Kernel Max-Sliced Wasserstein Distances24 May 2024
- 2024Practical Kernel Tests of Conditional Independence20 Feb 2024
- 2023A Bias-Variance-Covariance Decomposition of Kernel Scores for Generative Models9 Oct 2023
- 2023Partial identification of kernel based two sample tests with mismeasured data7 Aug 2023
- 2023MMD-FUSE: Learning and Combining Kernels for Two-Sample Testing Without Data Splitting14 Jun 2023
- 2023A Semi-Bayesian Nonparametric Estimator of the Maximum Mean Discrepancy Measure: Applications in Goodness-of-Fit Testing and Generative Adversarial Networks5 Mar 2023
- 2023Nystr"om M-Hilbert-Schmidt Independence Criterion20 Feb 2023
- 2023Variable Selection for Kernel Two-Sample Tests15 Feb 2023
- 2023Compress Then Test: Powerful Kernel Testing in Near-linear Time14 Jan 2023
- 2022Subspace Recovery from Heterogeneous Data with Non-isotropic Noise24 Oct 2022
- 2022A general framework for the analysis of kernel-based tests31 Aug 2022
- 2022Discussion of `Multiscale Fisher's Independence Test for Multivariate Dependence'22 Jun 2022
- 2026Regularized f-Divergence Kernel Testscited by 2
- 2026Regularized f-Divergence Kernel Tests27 Jan 2026
- 2023MMD-FUSE: Learning and Combining Kernels for Two-Sample Testing Without Data Splittingcited by 33
- 2024Practical Kernel Tests of Conditional Independencecited by 15
- 2022Subspace Recovery from Heterogeneous Data with Non-isotropic Noisecited by 14
- 2023Compress Then Test: Powerful Kernel Testing in Near-linear Timecited by 14
- 2025A Practical Introduction to Kernel Discrepancies: MMD, HSIC & KSDcited by 13
- 2023A Bias-Variance-Covariance Decomposition of Kernel Scores for Generative Modelscited by 8
- 2023Variable Selection for Kernel Two-Sample Testscited by 7
- 2024Robust Kernel Hypothesis Testing under Data Corruptioncited by 7
- 2025A Scalable Nystrom-Based Kernel Two-Sample Test with Permutationscited by 6
- 2025DUAL: Learning Diverse Kernels for Aggregated Two-sample and Independence Testingcited by 6
- 2023Nystr"om M-Hilbert-Schmidt Independence Criterioncited by 5
- 2025A Unified View of Optimal Kernel Hypothesis Testingcited by 5
12 most cited of 26 All 26 (JSON)
- 2026USAD: Uncertainty-aware Statistical Adversarial Detection26 Jun 2026
- 2025Kernel-Based Evaluation of Conditional Biological Sequence Models17 Oct 2025
- 2025DUAL: Learning Diverse Kernels for Aggregated Two-sample and Independence Testing13 Oct 2025
- 2025Anchor-based Maximum Discrepancy for Relative Similarity Testing12 Oct 2025
- 2025Are Two Datasets Close Enough With Statistical Significance? A Kernel Distributional Closeness Testing Approach17 Jul 2025
- 2025Kernel Quantile Embeddings and Associated Probability Metrics26 May 2025
- 2025Optimal Online Change Detection via Random Fourier Features23 May 2025
- 2025Beyond Basic A/B testing: Improving Statistical Efficiency for Business Growth13 May 2025
- 2025A Unified View of Optimal Kernel Hypothesis Testing10 Mar 2025
- 2025A Practical Introduction to Kernel Discrepancies: MMD, HSIC & KSD4 Mar 2025
- 2025Prior shift estimation for positive unlabeled data through the lens of kernel embedding28 Feb 2025
- 2025A Scalable Nystrom-Based Kernel Two-Sample Test with Permutations19 Feb 2025
12 newest of 26 All 26 (JSON)