ES-GNN: Generalizing Graph Neural Networks Beyond Homophily with Edge Splitting
Not on the map. Why?
Abstract (arXiv)
While Graph Neural Networks (GNNs) have achieved enormous success in multiple graph analytical tasks, modern variants mostly rely on the strong inductive bias of homophily. However, real-world networks typically exhibit both homophilic and heterophilic linking patterns, wherein adjacent nodes may share dissimilar attributes and distinct labels. Therefore, GNNs smoothing node proximity holistically may aggregate both task-relevant and irrelevant (even harmful) information, limiting their ability to generalize to heterophilic graphs and potentially causing non-robustness. In this work, we propose a novel Edge Splitting GNN (ES-GNN) framework to adaptively distinguish between graph edges either relevant or irrelevant to learning tasks. This essentially transfers the original graph into two subgraphs with the same node set but complementary edge sets dynamically. Given that, information propagation separately on these subgraphs and edge splitting are alternatively conducted, thus disentangling the task-relevant and irrelevant features. Theoretically, we show that our ES-GNN can be regarded as a solution to a disentangled graph denoising problem, which further illustrates our motivations and interprets the improved generalization beyond homophily. Extensive experiments over 11 benchmark and 1 synthetic datasets not only demonstrate the effective performance of ES-GNN but also highlight its robustness to adversarial graphs and mitigation of the over-smoothing problem.
Key facts. Cited by 13 papers in the map (data through 7 Oct 2026). Builds on 67 of its 123 references that are in the map. First posted on arXiv 27 May 2022.
Builds on
67 of 123 references.
References · 67
- 2014Adam: A Method for Stochastic Optimizationcited by 36,960
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2017Neural Message Passing for Quantum Chemistrycited by 3,460
- 2016Categorical Reparameterization with Gumbel-Softmaxcited by 2,708
- 2019Optuna: A Next-generation Hyperparameter Optimization Frameworkcited by 2,455
- 2018Graph Neural Networks: A Review of Methods and Applicationscited by 1,571
- 2019Simplifying Graph Convolutional Networkscited by 1,470
- 2016The Concrete Distribution: A Continuous Relaxation of Discrete Random Variablescited by 1,135
- 2018Graph Convolutional Neural Networks for Web-Scale Recommender Systemscited by 1,133
- 2018Predict then Propagate: Graph Neural Networks meet Personalized PageRankcited by 987
- 2018Representation Learning on Graphs with Jumping Knowledge Networkscited by 875
38 more
- 2020Simple and Deep Graph Convolutional Networkscited by 857
- 2020Geom-GCN: Geometric Graph Convolutional Networkscited by 821
- 2020Adaptive Universal Generalized PageRank Graph Neural Networkcited by 592
- 2019Multi-scale Attributed Node Embeddingcited by 543
- 2018Deep Learning on Graphs: A Surveycited by 393
- 2020Graph Structure Learning for Robust Graph Neural Networkscited by 368
- 2021Beyond Low-frequency Information in Graph Convolutional Networkscited by 361
- 2020Improving Graph Neural Network Expressivity via Subgraph Isomorphism Countingcited by 312
- 2021Large Scale Learning on Non-Homophilous Graphs: New Benchmarks and Strong Simple Methodscited by 309
- 2018Towards a Definition of Disentangled Representationscited by 294
- 2019Revisiting Graph Neural Networks: All We Have is Low-Pass Filterscited by 260
- 2017Learning to Represent Programs with Graphscited by 219
- 2020Graph Neural Networks with Heterophilycited by 202
- 2019Graph Neural Networks with convolutional ARMA filterscited by 185
- 2021Two Sides of the Same Coin: Heterophily and Oversmoothing in Graph Convolutional Neural Networkscited by 182
- 2021Is Homophily a Necessity for Graph Neural Networks?cited by 182
- 2022Finding Global Homophily in Graph Neural Networks When Meeting Heterophilycited by 179
- 2022Interpretable and Generalizable Graph Learning via Stochastic Attention Mechanismcited by 171
- 2020Higher-Order Explanations of Graph Neural Networks via Relevant Walkscited by 138
- 2018Contextual Stochastic Block Modelscited by 134
- 2021Interpreting and Unifying Graph Neural Networks with An Optimization Frameworkcited by 131
- 2020Learning to Drop: Robust Graph Neural Network via Topological Denoisingcited by 127
- 2020A Unified View on Graph Neural Networks as Graph Signal Denoisingcited by 110
- 2021InfoGCL: Information-Aware Graph Contrastive Learningcited by 105
- 2022How to Find Your Friendly Neighborhood: Graph Attention Design with Self-Supervisioncited by 102
- 2021Breaking the Limits of Message Passing Graph Neural Networkscited by 101
- 2017Disentangled Person Image Generationcited by 98
- 2020Unifying Graph Convolutional Neural Networks and Label Propagationcited by 98
- 2021Breaking the Limit of Graph Neural Networks by Improving the Assortativity of Graphs with Local Mixing Patternscited by 95
- 2020Non-Local Graph Neural Networkscited by 91
- 2021New Benchmarks for Learning on Non-Homophilous Graphscited by 81
- 2021Graph Structure Learning with Variational Information Bottleneckcited by 81
- 2020Factorizable Graph Convolutional Networkscited by 79
- 2020Scattering GCN: Overcoming Oversmoothness in Graph Convolutional Networkscited by 57
- 2020Policy-GNN: Aggregation Optimization for Graph Neural Networkscited by 48
- 2019On Learning Disentangled Representations for Gait Recognitioncited by 43
- 2019Independence Promoted Graph Disentangled Networkscited by 38
- 2020EdgeNets:Edge Varying Graph Neural Networkscited by 36
50 most cited of 67 All 67 (JSON)
Built on by
Citing papers per year: 2023: 1; 2024: 6; 2025: 4; 2026: 2.
13 papers.
Sort:
- 2024The Heterophilic Graph Learning Handbook: Benchmarks, Models, Theoretical Analysis, Applications and Challengescited by 29
- 2023Graph Neural Networks with Diverse Spectral Filteringcited by 9
- 2024Preventing Representational Rank Collapse in MPNNs by Splitting the Computational Graphcited by 6
- 2024Navigating Distribution Shifts in Medical Image Analysis: A Surveycited by 5
- 2025Beyond Fixed Depth: Adaptive Graph Neural Networks for Node Classification Under Varying Homophilycited by 5
- 2024Rethinking Spectral Graph Neural Networks with Spatially Adaptive Filteringcited by 3
- 2024Edge-Splitting MLP: Node Classification on Homophilic and Heterophilic Graphs without Message Passingcited by 2
- 2025Jensen-Shannon Divergence Message-Passing for Rich-Text Graph Representation Learningcited by 2
- 2024HyperAggregation: Aggregating over Graph Edges with Hypernetworkscited by 1
- 2025A Generative Graph Contrastive Learning Model with Global Signalcited by 0
- 2025Bridging Computational Social Science and Deep Learning: Cultural Dissemination-Inspired Graph Neural Networkscited by 0
- 2026Efficient and Scalable Granular-ball Graph Coarsening Method for Large-scale Graph Node Classificationcited by 0
1 more
- 2026Grad2Fair: A Gradient-driven Approach for Graph Fairness without Demographics16 Jul 2026
- 2026Efficient and Scalable Granular-ball Graph Coarsening Method for Large-scale Graph Node Classification31 Mar 2026
- 2025Jensen-Shannon Divergence Message-Passing for Rich-Text Graph Representation Learning23 Dec 2025
- 2025Beyond Fixed Depth: Adaptive Graph Neural Networks for Node Classification Under Varying Homophily10 Nov 2025
- 2025Bridging Computational Social Science and Deep Learning: Cultural Dissemination-Inspired Graph Neural Networks23 Sep 2025
- 2025A Generative Graph Contrastive Learning Model with Global Signal25 Apr 2025
- 2024Edge-Splitting MLP: Node Classification on Homophilic and Heterophilic Graphs without Message Passing11 Dec 2024
- 2024Navigating Distribution Shifts in Medical Image Analysis: A Survey5 Nov 2024
- 2024Preventing Representational Rank Collapse in MPNNs by Splitting the Computational Graph17 Sep 2024
- 2024HyperAggregation: Aggregating over Graph Edges with Hypernetworks16 Jul 2024
- 2024The Heterophilic Graph Learning Handbook: Benchmarks, Models, Theoretical Analysis, Applications and Challenges12 Jul 2024
- 2024Rethinking Spectral Graph Neural Networks with Spatially Adaptive Filtering17 Jan 2024
1 more
- 2023Graph Neural Networks with Diverse Spectral Filtering14 Dec 2023
- 2024The Heterophilic Graph Learning Handbook: Benchmarks, Models, Theoretical Analysis, Applications and Challengescited by 29
- 2023Graph Neural Networks with Diverse Spectral Filteringcited by 9
- 2024Preventing Representational Rank Collapse in MPNNs by Splitting the Computational Graphcited by 6
- 2024Navigating Distribution Shifts in Medical Image Analysis: A Surveycited by 5
- 2025Beyond Fixed Depth: Adaptive Graph Neural Networks for Node Classification Under Varying Homophilycited by 5
- 2024Rethinking Spectral Graph Neural Networks with Spatially Adaptive Filteringcited by 3
- 2024Edge-Splitting MLP: Node Classification on Homophilic and Heterophilic Graphs without Message Passingcited by 2
- 2025Jensen-Shannon Divergence Message-Passing for Rich-Text Graph Representation Learningcited by 2
- 2024HyperAggregation: Aggregating over Graph Edges with Hypernetworkscited by 1
- 2025A Generative Graph Contrastive Learning Model with Global Signalcited by 0
- 2025Bridging Computational Social Science and Deep Learning: Cultural Dissemination-Inspired Graph Neural Networkscited by 0
- 2026Efficient and Scalable Granular-ball Graph Coarsening Method for Large-scale Graph Node Classificationcited by 0
12 most cited of 13 All 13 (JSON)
- 2026Grad2Fair: A Gradient-driven Approach for Graph Fairness without Demographics16 Jul 2026
- 2026Efficient and Scalable Granular-ball Graph Coarsening Method for Large-scale Graph Node Classification31 Mar 2026
- 2025Jensen-Shannon Divergence Message-Passing for Rich-Text Graph Representation Learning23 Dec 2025
- 2025Beyond Fixed Depth: Adaptive Graph Neural Networks for Node Classification Under Varying Homophily10 Nov 2025
- 2025Bridging Computational Social Science and Deep Learning: Cultural Dissemination-Inspired Graph Neural Networks23 Sep 2025
- 2025A Generative Graph Contrastive Learning Model with Global Signal25 Apr 2025
- 2024Edge-Splitting MLP: Node Classification on Homophilic and Heterophilic Graphs without Message Passing11 Dec 2024
- 2024Navigating Distribution Shifts in Medical Image Analysis: A Survey5 Nov 2024
- 2024Preventing Representational Rank Collapse in MPNNs by Splitting the Computational Graph17 Sep 2024
- 2024HyperAggregation: Aggregating over Graph Edges with Hypernetworks16 Jul 2024
- 2024The Heterophilic Graph Learning Handbook: Benchmarks, Models, Theoretical Analysis, Applications and Challenges12 Jul 2024
- 2024Rethinking Spectral Graph Neural Networks with Spatially Adaptive Filtering17 Jan 2024
12 newest of 13 All 13 (JSON)