ColonFormer: An Efficient Transformer based Method for Colon Polyp Segmentation
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Abstract (arXiv)
Identifying polyps is challenging for automatic analysis of endoscopic images in computer-aided clinical support systems. Models based on convolutional networks (CNN), transformers, and their combinations have been proposed to segment polyps with promising results. However, those approaches have limitations either in modeling the local appearance of the polyps only or lack of multi-level features for spatial dependency in the decoding process. This paper proposes a novel network, namely ColonFormer, to address these limitations. ColonFormer is an encoder-decoder architecture capable of modeling long-range semantic information at both encoder and decoder branches. The encoder is a lightweight architecture based on transformers for modeling global semantic relations at multi scales. The decoder is a hierarchical network structure designed for learning multi-level features to enrich feature representation. Besides, a refinement module is added with a new skip connection technique to refine the boundary of polyp objects in the global map for accurate segmentation. Extensive experiments have been conducted on five popular benchmark datasets for polyp segmentation, including Kvasir, CVC-Clinic DB, CVC-ColonDB, CVC-T, and ETIS-Larib. Experimental results show that our ColonFormer outperforms other state-of-the-art methods on all benchmark datasets.
Key facts. Cited by 28 papers in the map (data through 7 Oct 2026). Builds on 39 of its 60 references that are in the map. First posted on arXiv 17 May 2022.
Builds on
39 of 60 references.
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Citing papers per year: 2022: 4; 2023: 10; 2024: 6; 2025: 6; 2026: 2.
28 papers.
Sort:
- 2023Using DUCK-Net for Polyp Image Segmentationcited by 30
- 2023TransNetR: Transformer-based Residual Network for Polyp Segmentation with Multi-Center Out-of-Distribution Testingcited by 26
- 2023A Recent Survey of Vision Transformers for Medical Image Segmentationcited by 22
- 2023Transformers in Healthcare: A Surveycited by 17
- 2023A Survey on Deep Learning for Polyp Segmentation: Techniques, Challenges and Future Trendscited by 12
- 2024Contextrast: Contextual Contrastive Learning for Semantic Segmentationcited by 12
- 2023Attention Mechanisms in Medical Image Segmentation: A Surveycited by 9
- 2023Polyper: Boundary Sensitive Polyp Segmentationcited by 8
- 2024EffiSegNet: Gastrointestinal Polyp Segmentation through a Pre-Trained EfficientNet-based Network with a Simplified Decodercited by 7
- 2024Polyp-DAM: Polyp segmentation via depth anything modelcited by 5
- 2022LAPFormer: A Light and Accurate Polyp Segmentation Transformercited by 2
- 2023UGCANet: A Unified Global Context-Aware Transformer-based Network with Feature Alignment for Endoscopic Image Analysiscited by 2
16 more
- 2025PolypFlow: Reinforcing Polyp Segmentation with Flow-Driven Dynamicscited by 2
- 2022Online pseudo labeling for polyp segmentation with momentum networkscited by 1
- 2023DCELANM-Net:Medical Image Segmentation based on Dual Channel Efficient Layer Aggregation Network with Learnercited by 1
- 2023TransRUPNet for Improved Polyp Segmentationcited by 1
- 2024HiFiSeg: High-Frequency Information Enhanced Polyp Segmentation with Global-Local Vision Transformercited by 1
- 2022Automated GI tract segmentation using deep learningcited by 0
- 2022Rethinking the transfer learning for FCN based polyp segmentation in colonoscopycited by 0
- 2024Polyp segmentation in colonoscopy images using DeepLabV3++cited by 0
- 2024Multi-scale and Multi-path Cascaded Convolutional Network for Semantic Segmentation of Colorectal Polypscited by 0
- 2025MedSegNet10: A Publicly Accessible Network Repository for Split Federated Medical Image Segmentationcited by 0
- 2025FocusNet: Transformer-enhanced Polyp Segmentation with Local and Pooling Attentioncited by 0
- 2025Hybrid(Transformer+CNN)-based Polyp Segmentationcited by 0
- 2025PVTAdpNet: Polyp Segmentation using Pyramid vision transformer with a novel Adapter blockcited by 0
- 2025CLFSeg: A Fuzzy-Logic based Solution for Boundary Clarity and Uncertainty Reduction in Medical Image Segmentationcited by 0
- 2026A multi-center analysis of deep learning methods for video polyp detection and segmentationcited by 0
- 2026Metrics or Mirage? An Audit of Evaluation Inconsistencies in Colonoscopy Polyp Segmentation Benchmarkscited by 0
- 2026Metrics or Mirage? An Audit of Evaluation Inconsistencies in Colonoscopy Polyp Segmentation Benchmarks9 Jul 2026
- 2026A multi-center analysis of deep learning methods for video polyp detection and segmentation4 Mar 2026
- 2025CLFSeg: A Fuzzy-Logic based Solution for Boundary Clarity and Uncertainty Reduction in Medical Image Segmentation28 Oct 2025
- 2025PVTAdpNet: Polyp Segmentation using Pyramid vision transformer with a novel Adapter block28 Sep 2025
- 2025Hybrid(Transformer+CNN)-based Polyp Segmentation8 Aug 2025
- 2025FocusNet: Transformer-enhanced Polyp Segmentation with Local and Pooling Attention18 Apr 2025
- 2025MedSegNet10: A Publicly Accessible Network Repository for Split Federated Medical Image Segmentation26 Mar 2025
- 2025PolypFlow: Reinforcing Polyp Segmentation with Flow-Driven Dynamics26 Feb 2025
- 2024Multi-scale and Multi-path Cascaded Convolutional Network for Semantic Segmentation of Colorectal Polyps3 Dec 2024
- 2024HiFiSeg: High-Frequency Information Enhanced Polyp Segmentation with Global-Local Vision Transformer3 Oct 2024
- 2024Polyp segmentation in colonoscopy images using DeepLabV3++27 Jul 2024
- 2024EffiSegNet: Gastrointestinal Polyp Segmentation through a Pre-Trained EfficientNet-based Network with a Simplified Decoder23 Jul 2024
16 more
- 2024Contextrast: Contextual Contrastive Learning for Semantic Segmentation16 Apr 2024
- 2024Polyp-DAM: Polyp segmentation via depth anything model3 Feb 2024
- 2023Polyper: Boundary Sensitive Polyp Segmentation14 Dec 2023
- 2023A Recent Survey of Vision Transformers for Medical Image Segmentation1 Dec 2023
- 2023A Survey on Deep Learning for Polyp Segmentation: Techniques, Challenges and Future Trends30 Nov 2023
- 2023Using DUCK-Net for Polyp Image Segmentation3 Nov 2023
- 2023UGCANet: A Unified Global Context-Aware Transformer-based Network with Feature Alignment for Endoscopic Image Analysis12 Jul 2023
- 2023Transformers in Healthcare: A Survey30 Jun 2023
- 2023TransRUPNet for Improved Polyp Segmentation3 Jun 2023
- 2023Attention Mechanisms in Medical Image Segmentation: A Survey29 May 2023
- 2023DCELANM-Net:Medical Image Segmentation based on Dual Channel Efficient Layer Aggregation Network with Learner19 Apr 2023
- 2023TransNetR: Transformer-based Residual Network for Polyp Segmentation with Multi-Center Out-of-Distribution Testing13 Mar 2023
- 2022Rethinking the transfer learning for FCN based polyp segmentation in colonoscopy4 Nov 2022
- 2022LAPFormer: A Light and Accurate Polyp Segmentation Transformer10 Oct 2022
- 2022Online pseudo labeling for polyp segmentation with momentum networks29 Sep 2022
- 2022Automated GI tract segmentation using deep learning22 Jun 2022
- 2023Using DUCK-Net for Polyp Image Segmentationcited by 30
- 2023TransNetR: Transformer-based Residual Network for Polyp Segmentation with Multi-Center Out-of-Distribution Testingcited by 26
- 2023A Recent Survey of Vision Transformers for Medical Image Segmentationcited by 22
- 2023Transformers in Healthcare: A Surveycited by 17
- 2023A Survey on Deep Learning for Polyp Segmentation: Techniques, Challenges and Future Trendscited by 12
- 2024Contextrast: Contextual Contrastive Learning for Semantic Segmentationcited by 12
- 2023Attention Mechanisms in Medical Image Segmentation: A Surveycited by 9
- 2023Polyper: Boundary Sensitive Polyp Segmentationcited by 8
- 2024EffiSegNet: Gastrointestinal Polyp Segmentation through a Pre-Trained EfficientNet-based Network with a Simplified Decodercited by 7
- 2024Polyp-DAM: Polyp segmentation via depth anything modelcited by 5
- 2022LAPFormer: A Light and Accurate Polyp Segmentation Transformercited by 2
- 2023UGCANet: A Unified Global Context-Aware Transformer-based Network with Feature Alignment for Endoscopic Image Analysiscited by 2
12 most cited of 28 All 28 (JSON)
- 2026Metrics or Mirage? An Audit of Evaluation Inconsistencies in Colonoscopy Polyp Segmentation Benchmarks9 Jul 2026
- 2026A multi-center analysis of deep learning methods for video polyp detection and segmentation4 Mar 2026
- 2025CLFSeg: A Fuzzy-Logic based Solution for Boundary Clarity and Uncertainty Reduction in Medical Image Segmentation28 Oct 2025
- 2025PVTAdpNet: Polyp Segmentation using Pyramid vision transformer with a novel Adapter block28 Sep 2025
- 2025Hybrid(Transformer+CNN)-based Polyp Segmentation8 Aug 2025
- 2025FocusNet: Transformer-enhanced Polyp Segmentation with Local and Pooling Attention18 Apr 2025
- 2025MedSegNet10: A Publicly Accessible Network Repository for Split Federated Medical Image Segmentation26 Mar 2025
- 2025PolypFlow: Reinforcing Polyp Segmentation with Flow-Driven Dynamics26 Feb 2025
- 2024Multi-scale and Multi-path Cascaded Convolutional Network for Semantic Segmentation of Colorectal Polyps3 Dec 2024
- 2024HiFiSeg: High-Frequency Information Enhanced Polyp Segmentation with Global-Local Vision Transformer3 Oct 2024
- 2024Polyp segmentation in colonoscopy images using DeepLabV3++27 Jul 2024
- 2024EffiSegNet: Gastrointestinal Polyp Segmentation through a Pre-Trained EfficientNet-based Network with a Simplified Decoder23 Jul 2024
12 newest of 28 All 28 (JSON)