Optimized U-Net for Brain Tumor Segmentation
Not on the map. Why?
Abstract (arXiv)
We propose an optimized U-Net architecture for a brain tumor segmentation task in the BraTS21 challenge. To find the optimal model architecture and the learning schedule, we have run an extensive ablation study to test: deep supervision loss, Focal loss, decoder attention, drop block, and residual connections. Additionally, we have searched for the optimal depth of the U-Net encoder, number of convolutional channels and post-processing strategy. Our method won the validation phase and took third place in the test phase. We have open-sourced the code to reproduce our BraTS21 submission at the NVIDIA Deep Learning Examples GitHub Repository.
Key facts. Cited by 40 papers in the map (data through 7 Oct 2026). Builds on 23 of its 38 references that are in the map. First posted on arXiv 7 Oct 2021.
Builds on
23 of 38 references.
References · 23
- 2017Attention Is All You Needcited by 59,932
- 2015Deep Residual Learning for Image Recognitioncited by 51,809
- 2014Adam: A Method for Stochastic Optimizationcited by 36,960
- 2020An Image is Worth 16x16 Words: Transformers for Image Recognition at Scalecited by 29,915
- 2019PyTorch: An Imperative Style, High-Performance Deep Learning Librarycited by 20,160
- 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,604
- 2014ImageNet Large Scale Visual Recognition Challengecited by 8,441
- 2016Densely Connected Convolutional Networkscited by 6,691
- 2016SGDR: Stochastic Gradient Descent with Warm Restartscited by 4,993
- 2015Delving Deep into Rectifiers: Surpassing Human-Level Performance on ImageNet Classificationcited by 3,590
- 2016V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentationcited by 2,284
- 2018UNet++: A Nested U-Net Architecture for Medical Image Segmentationcited by 1,518
11 more
- 2018Attention U-Net: Learning Where to Look for the Pancreascited by 1,420
- 2017Mixed Precision Trainingcited by 1,135
- 2021UNETR: Transformers for 3D Medical Image Segmentationcited by 954
- 2017Focal Loss for Dense Object Detectioncited by 749
- 2021The Medical Segmentation Decathloncited by 620
- 2021The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classificationcited by 507
- 20183D MRI brain tumor segmentation using autoencoder regularizationcited by 324
- 2018DropBlock: A regularization method for convolutional networkscited by 261
- 2020nnU-Net for Brain Tumor Segmentationcited by 103
- 2017Deeply-Supervised CNN for Prostate Segmentationcited by 30
- 2018Cascaded V-Net using ROI masks for brain tumor segmentationcited by 26
Built on by
Citing papers per year: 2022: 8; 2023: 14; 2024: 11; 2025: 4; 2026: 3.
40 papers.
Sort:
By area:
- 2022CKD-TransBTS: Clinical Knowledge-Driven Hybrid Transformer with Modality-Correlated Cross-Attention for Brain Tumor Segmentationcited by 24
- 2022FakeNews: GAN-based generation of realistic 3D volumetric data -- A systematic review and taxonomycited by 13
- 2023Topology-Aware Focal Loss for 3D Image Segmentationcited by 12
- 2023MIST: Medical Image Segmentation Transformer with Convolutional Attention Mixing (CAM) Decodercited by 12
- 2022High-Resolution Swin Transformer for Automatic Medical Image Segmentationcited by 8
- 2023Continuous U-Net: Faster, Greater and Noiselesscited by 8
- 2023AME-CAM: Attentive Multiple-Exit CAM for Weakly Supervised Segmentation on MRI Brain Tumorcited by 8
- 2022Large-Kernel Attention for 3D Medical Image Segmentationcited by 7
- 2023Fetal-BET: Brain Extraction Tool for Fetal MRIcited by 7
- 2023Large-kernel Attention for Efficient and Robust Brain Lesion Segmentationcited by 5
- 2024Federated brain tumor segmentation: an extensive benchmarkcited by 5
- 2024An Ensemble Approach for Brain Tumor Segmentation and Synthesiscited by 5
28 more
- 2022Voxels Intersecting along Orthogonal Levels Attention U-Net for Intracerebral Haemorrhage Segmentation in Head CTcited by 4
- 2024An Optimization Framework for Processing and Transfer Learning for the Brain Tumor Segmentationcited by 4
- 2024Robust Conformal Volume Estimation in 3D Medical Imagescited by 4
- 2025ReCoSeg++:Extended Residual-Guided Cross-Modal Diffusion for Brain Tumor Segmentationcited by 3
- 2022Negligible effect of brain MRI data preprocessing for tumor segmentationcited by 2
- 2023AutoPET Challenge 2023: Sliding Window-based Optimization of U-Netcited by 2
- 2023Brain Tumor Segmentation Based on Deep Learning, Attention Mechanisms, and Energy-Based Uncertainty Predictioncited by 2
- 2024Enhancing Weakly Supervised 3D Medical Image Segmentation through Probabilistic-aware Learningcited by 2
- 2022Multi-Modality Abdominal Multi-Organ Segmentation with Deep Supervised 3D Segmentation Modelcited by 1
- 2023Prediction of Diblock Copolymer Morphology via Machine Learningcited by 1
- 2023Whole-brain radiomics for clustered federated personalization in brain tumor segmentationcited by 1
- 2024Train-Free Segmentation in MRI with Cubical Persistent Homologycited by 1
- 2024Carefully Structured Compression: Efficiently Managing StarCraft II Datacited by 1
- 2024A4-Unet: Deformable Multi-Scale Attention Network for Brain Tumor Segmentationcited by 1
- 2025crossMoDA Challenge: Evolution of Cross-Modality Domain Adaptation Techniques for Vestibular Schwannoma and Cochlea Segmentation from 2021 to 2023cited by 1
- 2025Multimodal Fusion at Three Tiers: Physics-Driven Data Generation and Vision-Language Guidance for Brain Tumor Segmentationcited by 1
- 2022Artificial Intelligence Solution for Effective Treatment Planning for Glioblastoma Patientscited by 0
- 2023Squeeze Excitation Embedded Attention UNet for Brain Tumor Segmentationcited by 0
- 2023A Novel Confidence Induced Class Activation Mapping for MRI Brain Tumor Segmentationcited by 0
- 2023Spatiotemporal Modeling Encounters 3D Medical Image Analysis: Slice-Shift UNet with Multi-View Fusioncited by 0
- 2023Tumor-Centered Patching for Enhanced Medical Image Segmentationcited by 0
- 2024Self-calibrated convolution towards glioma segmentationcited by 0
- 2024Re-DiffiNet: Modeling discrepancies in tumor segmentation using diffusion modelscited by 0
- 2024Hybrid Multihead Attentive Unet-3D for Brain Tumor Segmentationcited by 0
- 2025SWDL: Stratum-Wise Difference Learning with Deep Laplacian Pyramid for Semi-Supervised 3D Intracranial Hemorrhage Segmentationcited by 0
- 2026A Novel Framework using Intuitionistic Fuzzy Logic with U-Net and U-Net++ Architecture: A case Study of MRI Bain Image Segmentationcited by 0
- 2026SegGuidedNet: Sub-Region-Aware Attention Supervision for Interpretable Brain Tumor Segmentationcited by 0
- 2026Prob-BBDM: a Probabilistic Brownian Bridge Diffusion Model for MRI sequence image-to-image translationcited by 0
- 2026Prob-BBDM: a Probabilistic Brownian Bridge Diffusion Model for MRI sequence image-to-image translation23 Jun 2026
- 2026SegGuidedNet: Sub-Region-Aware Attention Supervision for Interpretable Brain Tumor Segmentation21 May 2026
- 2026A Novel Framework using Intuitionistic Fuzzy Logic with U-Net and U-Net++ Architecture: A case Study of MRI Bain Image Segmentation15 Mar 2026
- 2025ReCoSeg++:Extended Residual-Guided Cross-Modal Diffusion for Brain Tumor Segmentation1 Aug 2025
- 2025Multimodal Fusion at Three Tiers: Physics-Driven Data Generation and Vision-Language Guidance for Brain Tumor Segmentation14 Jul 2025
- 2025crossMoDA Challenge: Evolution of Cross-Modality Domain Adaptation Techniques for Vestibular Schwannoma and Cochlea Segmentation from 2021 to 202313 Jun 2025
- 2025SWDL: Stratum-Wise Difference Learning with Deep Laplacian Pyramid for Semi-Supervised 3D Intracranial Hemorrhage Segmentation12 Jun 2025
- 2024A4-Unet: Deformable Multi-Scale Attention Network for Brain Tumor Segmentation8 Dec 2024
- 2024An Ensemble Approach for Brain Tumor Segmentation and Synthesis26 Nov 2024
- 2024Carefully Structured Compression: Efficiently Managing StarCraft II Data11 Oct 2024
- 2024Federated brain tumor segmentation: an extensive benchmark7 Oct 2024
- 2024Robust Conformal Volume Estimation in 3D Medical Images29 Jul 2024
28 more
- 2024Hybrid Multihead Attentive Unet-3D for Brain Tumor Segmentation22 May 2024
- 2024Enhancing Weakly Supervised 3D Medical Image Segmentation through Probabilistic-aware Learning5 Mar 2024
- 2024Re-DiffiNet: Modeling discrepancies in tumor segmentation using diffusion models12 Feb 2024
- 2024An Optimization Framework for Processing and Transfer Learning for the Brain Tumor Segmentation10 Feb 2024
- 2024Self-calibrated convolution towards glioma segmentation7 Feb 2024
- 2024Train-Free Segmentation in MRI with Cubical Persistent Homology2 Jan 2024
- 2023Brain Tumor Segmentation Based on Deep Learning, Attention Mechanisms, and Energy-Based Uncertainty Prediction31 Dec 2023
- 2023MIST: Medical Image Segmentation Transformer with Convolutional Attention Mixing (CAM) Decoder30 Oct 2023
- 2023Whole-brain radiomics for clustered federated personalization in brain tumor segmentation17 Oct 2023
- 2023Fetal-BET: Brain Extraction Tool for Fetal MRI2 Oct 2023
- 2023AutoPET Challenge 2023: Sliding Window-based Optimization of U-Net21 Sep 2023
- 2023Prediction of Diblock Copolymer Morphology via Machine Learning31 Aug 2023
- 2023Tumor-Centered Patching for Enhanced Medical Image Segmentation23 Aug 2023
- 2023Large-kernel Attention for Efficient and Robust Brain Lesion Segmentation14 Aug 2023
- 2023Spatiotemporal Modeling Encounters 3D Medical Image Analysis: Slice-Shift UNet with Multi-View Fusion24 Jul 2023
- 2023AME-CAM: Attentive Multiple-Exit CAM for Weakly Supervised Segmentation on MRI Brain Tumor26 Jun 2023
- 2023A Novel Confidence Induced Class Activation Mapping for MRI Brain Tumor Segmentation8 Jun 2023
- 2023Squeeze Excitation Embedded Attention UNet for Brain Tumor Segmentation13 May 2023
- 2023Topology-Aware Focal Loss for 3D Image Segmentation24 Apr 2023
- 2023Continuous U-Net: Faster, Greater and Noiseless1 Feb 2023
- 2022Multi-Modality Abdominal Multi-Organ Segmentation with Deep Supervised 3D Segmentation Model24 Aug 2022
- 2022Voxels Intersecting along Orthogonal Levels Attention U-Net for Intracerebral Haemorrhage Segmentation in Head CT12 Aug 2022
- 2022High-Resolution Swin Transformer for Automatic Medical Image Segmentation23 Jul 2022
- 2022Large-Kernel Attention for 3D Medical Image Segmentation19 Jul 2022
- 2022CKD-TransBTS: Clinical Knowledge-Driven Hybrid Transformer with Modality-Correlated Cross-Attention for Brain Tumor Segmentation15 Jul 2022
- 2022FakeNews: GAN-based generation of realistic 3D volumetric data -- A systematic review and taxonomy4 Jul 2022
- 2022Negligible effect of brain MRI data preprocessing for tumor segmentation11 Apr 2022
- 2022Artificial Intelligence Solution for Effective Treatment Planning for Glioblastoma Patients9 Mar 2022
- 2025ReCoSeg++:Extended Residual-Guided Cross-Modal Diffusion for Brain Tumor Segmentationcited by 3
- 2024Re-DiffiNet: Modeling discrepancies in tumor segmentation using diffusion modelscited by 0
- 2026Prob-BBDM: a Probabilistic Brownian Bridge Diffusion Model for MRI sequence image-to-image translationcited by 0
- 2026Prob-BBDM: a Probabilistic Brownian Bridge Diffusion Model for MRI sequence image-to-image translation23 Jun 2026
- 2025ReCoSeg++:Extended Residual-Guided Cross-Modal Diffusion for Brain Tumor Segmentation1 Aug 2025
- 2024Re-DiffiNet: Modeling discrepancies in tumor segmentation using diffusion models12 Feb 2024
- 2022CKD-TransBTS: Clinical Knowledge-Driven Hybrid Transformer with Modality-Correlated Cross-Attention for Brain Tumor Segmentationcited by 24
- 2022FakeNews: GAN-based generation of realistic 3D volumetric data -- A systematic review and taxonomycited by 13
- 2023Topology-Aware Focal Loss for 3D Image Segmentationcited by 12
- 2023MIST: Medical Image Segmentation Transformer with Convolutional Attention Mixing (CAM) Decodercited by 12
- 2022High-Resolution Swin Transformer for Automatic Medical Image Segmentationcited by 8
- 2023Continuous U-Net: Faster, Greater and Noiselesscited by 8
- 2023AME-CAM: Attentive Multiple-Exit CAM for Weakly Supervised Segmentation on MRI Brain Tumorcited by 8
- 2022Large-Kernel Attention for 3D Medical Image Segmentationcited by 7
- 2023Fetal-BET: Brain Extraction Tool for Fetal MRIcited by 7
- 2023Large-kernel Attention for Efficient and Robust Brain Lesion Segmentationcited by 5
- 2024Federated brain tumor segmentation: an extensive benchmarkcited by 5
- 2024An Ensemble Approach for Brain Tumor Segmentation and Synthesiscited by 5
12 most cited of 37 All 37 (JSON)
- 2026SegGuidedNet: Sub-Region-Aware Attention Supervision for Interpretable Brain Tumor Segmentation21 May 2026
- 2026A Novel Framework using Intuitionistic Fuzzy Logic with U-Net and U-Net++ Architecture: A case Study of MRI Bain Image Segmentation15 Mar 2026
- 2025Multimodal Fusion at Three Tiers: Physics-Driven Data Generation and Vision-Language Guidance for Brain Tumor Segmentation14 Jul 2025
- 2025crossMoDA Challenge: Evolution of Cross-Modality Domain Adaptation Techniques for Vestibular Schwannoma and Cochlea Segmentation from 2021 to 202313 Jun 2025
- 2025SWDL: Stratum-Wise Difference Learning with Deep Laplacian Pyramid for Semi-Supervised 3D Intracranial Hemorrhage Segmentation12 Jun 2025
- 2024A4-Unet: Deformable Multi-Scale Attention Network for Brain Tumor Segmentation8 Dec 2024
- 2024An Ensemble Approach for Brain Tumor Segmentation and Synthesis26 Nov 2024
- 2024Carefully Structured Compression: Efficiently Managing StarCraft II Data11 Oct 2024
- 2024Federated brain tumor segmentation: an extensive benchmark7 Oct 2024
- 2024Robust Conformal Volume Estimation in 3D Medical Images29 Jul 2024
- 2024Hybrid Multihead Attentive Unet-3D for Brain Tumor Segmentation22 May 2024
- 2024Enhancing Weakly Supervised 3D Medical Image Segmentation through Probabilistic-aware Learning5 Mar 2024
12 newest of 37 All 37 (JSON)