mlsanityData to 14 Oct 2026

t-viSNE: Interactive Assessment and Interpretation of t-SNE Projections

arXiv 2002.06910 ↗First posted 17 Feb 2020cs.LG cs.HC stat.MLcited by 43

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Abstract (arXiv)

t-Distributed Stochastic Neighbor Embedding (t-SNE) for the visualization of multidimensional data has proven to be a popular approach, with successful applications in a wide range of domains. Despite their usefulness, t-SNE projections can be hard to interpret or even misleading, which hurts the trustworthiness of the results. Understanding the details of t-SNE itself and the reasons behind specific patterns in its output may be a daunting task, especially for non-experts in dimensionality reduction. In this work, we present t-viSNE, an interactive tool for the visual exploration of t-SNE projections that enables analysts to inspect different aspects of their accuracy and meaning, such as the effects of hyper-parameters, distance and neighborhood preservation, densities and costs of specific neighborhoods, and the correlations between dimensions and visual patterns. We propose a coherent, accessible, and well-integrated collection of different views for the visualization of t-SNE projections. The applicability and usability of t-viSNE are demonstrated through hypothetical usage scenarios with real data sets. Finally, we present the results of a user study where the tool's effectiveness was evaluated. By bringing to light information that would normally be lost after running t-SNE, we hope to support analysts in using t-SNE and making its results better understandable.

Key facts. Cited by 43 papers in the map (data through 14 Oct 2026). First posted on arXiv 17 Feb 2020.

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Citing papers per year: 2021: 7; 2022: 9; 2023: 6; 2024: 7; 2025: 8; 2026: 6.

43 papers.

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  1. 2021Theoretical Foundations of t-SNE for Visualizing High-Dimensional Clustered Datacited by 55
  2. 2023Visual Analytics For Machine Learning: A Data Perspective Surveycited by 25
  3. 2021Measuring and Explaining the Inter-Cluster Reliability of Multidimensional Projectionscited by 20
  4. 2022Uniform Manifold Approximation with Two-phase Optimizationcited by 12
  5. 2022DendroMap: Visual Exploration of Large-Scale Image Datasets for Machine Learning with Treemapscited by 12
  6. 2021UnProjection: Leveraging Inverse-Projections for Visual Analytics of High-Dimensional Datacited by 8
  7. 2022Feature Learning for Nonlinear Dimensionality Reduction toward Maximal Extraction of Hidden Patternscited by 8
  8. 2022EVNet: An Explainable Deep Network for Dimension Reductioncited by 8
  9. 2025Stop Misusing t-SNE and UMAP for Visual Analyticscited by 8
  10. 2021FeatureEnVi: Visual Analytics for Feature Engineering Using Stepwise Selection and Semi-Automatic Extraction Approachescited by 7
  11. 2021Attribute-based Explanations of Non-Linear Embeddings of High-Dimensional Datacited by 7
  12. 2022Dispersed Pixel Perturbation-based Imperceptible Backdoor Trigger for Image Classifier Modelscited by 7
31 more
  1. 2023New Adversarial Image Detection Based on Sentiment Analysiscited by 6
  2. 2021HyperNP: Interactive Visual Exploration of Multidimensional Projection Hyperparameterscited by 5
  3. 2022HardVis: Visual Analytics to Handle Instance Hardness Using Undersampling and Oversampling Techniquescited by 5
  4. 2022Laplacian-based Cluster-Contractive t-SNE for High Dimensional Data Visualizationcited by 3
  5. 2023Visual Analytics of Multivariate Networks with Representation Learning and Composite Variable Constructioncited by 3
  6. 2025Visual Analytics for Explainable and Trustworthy Artificial Intelligencecited by 3
  7. 2023DeforestVis: Behavior Analysis of Machine Learning Models with Surrogate Decision Stumpscited by 2
  8. 2024DimVis: Interpreting Visual Clusters in Dimensionality Reduction With Explainable Boosting Machinecited by 2
  9. 2024Pattern or Artifact? Interactively Exploring Embedding Quality with TRACEcited by 2
  10. 2021Exploring Multi-dimensional Data via Subset Embeddingcited by 1
  11. 2023Non-destructive Fault Diagnosis of Electronic Interconnects by Learning Signal Patterns of Reflection Coefficient in the Frequency Domaincited by 1
  12. 2024Enhancing Dimension-Reduced Scatter Plots with Class and Feature Centroidscited by 1
  13. 2024VERA: Generating Visual Explanations of Two-Dimensional Embeddings via Region Annotationcited by 1
  14. 2024Feature Clock: High-Dimensional Effects in Two-Dimensional Plotscited by 1
  15. 2024Federated t-SNE and UMAP for Distributed Data Visualizationcited by 1
  16. 2025Dataset-Adaptive Dimensionality Reductioncited by 1
  17. 2025UMATO: Bridging Local and Global Structures for Reliable Visual Analytics with Dimensionality Reductioncited by 1
  18. 2025Enhancing Multimodal Protein Function Prediction Through Dual-Branch Dynamic Selection with Reconstructive Pre-Trainingcited by 1
  19. 2026LangLasso: Interactive Cluster Descriptions through LLM Explanationcited by 1
  20. 2026Evaluating Interactive 2D Visualization as a Sample Selection Strategy for Biomedical Time-Series Data Annotationcited by 1
  21. 2022Scalable semi-supervised dimensionality reduction with GPU-accelerated EmbedSOMcited by 0
  22. 2022Opening the black-box of Neighbor Embedding with Hotelling's T2 statistic and Q-residualscited by 0
  23. 2023BI-LAVA: Biocuration with Hierarchical Image Labeling through Active Learning and Visual Analysiscited by 0
  24. 2024Lens functions for exploring UMAP Projections with Domain Knowledgecited by 0
  25. 2025InfoClus: Informative Clustering of High-dimensional Data Embeddingscited by 0
  26. 2025Navigating High-Dimensional Backstage: A Guide for Exploring Literature for the Reliable Use of Dimensionality Reductioncited by 0
  27. 2025Why Can't I See My Clusters? A Precision-Recall Approach to Dimensionality Reduction Validationcited by 0
  28. 2026LCIP: Loss-Controlled Inverse Projection of High-Dimensional Image Datacited by 0
  29. 2026FADEx: Feature Attribution and Distortion-based Explanation of Dimensionality Reductioncited by 0
  30. 2026Understanding Differentiable Embeddings Through Differential and Integral Geometrycited by 0
  31. 2026TSExplorer: An interactive data annotation and exploration tool for time-series datacited by 0