Learning Hierarchy-Aware Knowledge Graph Embeddings for Link Prediction
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Abstract (arXiv)
Knowledge graph embedding, which aims to represent entities and relations as low dimensional vectors (or matrices, tensors, etc.), has been shown to be a powerful technique for predicting missing links in knowledge graphs. Existing knowledge graph embedding models mainly focus on modeling relation patterns such as symmetry/antisymmetry, inversion, and composition. However, many existing approaches fail to model semantic hierarchies, which are common in real-world applications. To address this challenge, we propose a novel knowledge graph embedding model -- namely, Hierarchy-Aware Knowledge Graph Embedding (HAKE) -- which maps entities into the polar coordinate system. HAKE is inspired by the fact that concentric circles in the polar coordinate system can naturally reflect the hierarchy. Specifically, the radial coordinate aims to model entities at different levels of the hierarchy, and entities with smaller radii are expected to be at higher levels; the angular coordinate aims to distinguish entities at the same level of the hierarchy, and these entities are expected to have roughly the same radii but different angles. Experiments demonstrate that HAKE can effectively model the semantic hierarchies in knowledge graphs, and significantly outperforms existing state-of-the-art methods on benchmark datasets for the link prediction task.
Key facts. Cited by 133 papers in the map (data through 7 Oct 2026). First posted on arXiv 21 Nov 2019.
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Citing papers per year: 2021: 15; 2022: 25; 2023: 31; 2024: 24; 2025: 25; 2026: 13.
133 papers.
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- 2021Neural Bellman-Ford Networks: A General Graph Neural Network Framework for Link Predictioncited by 273
- 2022A Survey of Knowledge Graph Reasoning on Graph Types: Static, Dynamic, and Multimodalcited by 106
- 2021ConE: Cone Embeddings for Multi-Hop Reasoning over Knowledge Graphscited by 78
- 2023Knowledge Graphs: Opportunities and Challengescited by 70
- 2022A*Net: A Scalable Path-based Reasoning Approach for Knowledge Graphscited by 49
- 2021Topology-Aware Correlations Between Relations for Inductive Link Prediction in Knowledge Graphscited by 47
- 2022Knowledge Graph Contrastive Learning Based on Relation-Symmetrical Structurecited by 43
- 2022Knowledge Graph Embedding: A Survey from the Perspective of Representation Spacescited by 41
- 2023Heterogeneous Federated Knowledge Graph Embedding Learning and Unlearningcited by 39
- 2021Modeling Heterogeneous Hierarchies with Relation-specific Hyperbolic Conescited by 38
- 2024KICGPT: Large Language Model with Knowledge in Context for Knowledge Graph Completioncited by 36
- 2022Contextual Semantic Embeddings for Ontology Subsumption Predictioncited by 31
38 more
- 2023IMF: Interactive Multimodal Fusion Model for Link Predictioncited by 28
- 2023Editing Language Model-based Knowledge Graph Embeddingscited by 23
- 2022Knowledge Graph Reasoning with Logics and Embeddings: Survey and Perspectivecited by 18
- 2021A Survey of Knowledge Graph Embedding and Their Applicationscited by 17
- 2023Structure Pretraining and Prompt Tuning for Knowledge Graph Transfercited by 16
- 2024KG-FIT: Knowledge Graph Fine-Tuning Upon Open-World Knowledgecited by 16
- 2021SAFRAN: An interpretable, rule-based link prediction method outperforming embedding modelscited by 15
- 2022Multi-task Pre-training Language Model for Semantic Network Completioncited by 15
- 2022Joint Language Semantic and Structure Embedding for Knowledge Graph Completioncited by 15
- 2022Language Models as Knowledge Embeddingscited by 14
- 2022CAKE: A Scalable Commonsense-Aware Framework For Multi-View Knowledge Graph Completioncited by 13
- 2023Knowledge Graph Completion with Counterfactual Augmentationcited by 13
- 2022Comprehensive Analysis of Negative Sampling in Knowledge Graph Representation Learningcited by 12
- 2022Dual-Geometric Space Embedding Model for Two-View Knowledge Graphscited by 12
- 2023Rethinking Language Models as Symbolic Knowledge Graphscited by 12
- 2022KRACL: Contrastive Learning with Graph Context Modeling for Sparse Knowledge Graph Completioncited by 10
- 2023Sem@K: Is my knowledge graph embedding model semantic-aware?cited by 10
- 2023Knowledge Graph Embedding: An Overviewcited by 10
- 2021HopfE: Knowledge Graph Representation Learning using Inverse Hopf Fibrationscited by 9
- 2024Negative Sampling in Knowledge Graph Representation Learning: A Reviewcited by 9
- 2025Hadamard product in deep learning: Introduction, Advances and Challengescited by 9
- 2022A Review of Knowledge Graph Completioncited by 8
- 2023KHAN: Knowledge-Aware Hierarchical Attention Networks for Accurate Political Stance Predictioncited by 8
- 2023Message Intercommunication for Inductive Relation Reasoningcited by 8
- 2023Structure Guided Multi-modal Pre-trained Transformer for Knowledge Graph Reasoningcited by 8
- 2022Duality-Induced Regularizer for Semantic Matching Knowledge Graph Embeddingscited by 7
- 2022Re-thinking Knowledge Graph Completion Evaluation from an Information Retrieval Perspectivecited by 7
- 2022Disconnected Emerging Knowledge Graph Oriented Inductive Link Predictioncited by 7
- 2023Negative Sampling with Adaptive Denoising Mixup for Knowledge Graph Embeddingcited by 7
- 2024Start from Zero: Triple Set Prediction for Automatic Knowledge Graph Completioncited by 7
- 2021Perform Like an Engine: A Closed-Loop Neural-Symbolic Learning Framework for Knowledge Graph Inferencecited by 6
- 2021Survey on English Entity Linking on Wikidatacited by 6
- 2022STaR: Knowledge Graph Embedding by Scaling, Translation and Rotationcited by 6
- 2023A Survey On Few-shot Knowledge Graph Completion with Structural and Commonsense Knowledgecited by 6
- 2024Large Language Model Enhanced Knowledge Representation Learning: A Surveycited by 6
- 2025Rethinking Regularization Methods for Knowledge Graph Completioncited by 6
- 2025Fast and Distributed Equivariant Graph Neural Networks by Virtual Node Learningcited by 6
- 2023HyperFormer: Enhancing Entity and Relation Interaction for Hyper-Relational Knowledge Graph Completioncited by 5
50 most cited of 133 All 133 (JSON)
- 2026Pattern Over-Generalization of Knowledge Graph Embedding3 Sep 2026
- 2026Hierarchy-Aware Semantic Losses for Knowledge Graph Link Prediction24 Aug 2026
- 2026CoAL-RAG: A Complexity-Aware Legal Retrieval-Augmented Generation Method18 Aug 2026
- 2026Beyond Triplet Plausibility: Relation Set Completion in Knowledge Graphs29 Jun 2026
- 2026RelBall: Relation Ball with Quaternion Rotation for Knowledge Graph Completion26 Jun 2026
- 2026Recipe-Controlled Decoder Audit for Structural Knowledge-Graph Completion12 Jun 2026
- 2026CORE: Cyclic Orthotope Relation Embedding for Knowledge Graph Completion11 May 2026
- 2026Graph Neural Network based Hierarchy-Aware Embeddings of Knowledge Graphs: Applications to Yeast Phenotype Prediction5 May 2026
- 2026Polaris: Coupled Orbital Polar Embeddings for Hierarchical Concept Learning30 Apr 2026
- 2026One Pass for All: A Discrete Diffusion Model for Knowledge Graph Triple Set Prediction20 Apr 2026
- 2026Large Language Models Meet Biomedical Knowledge Graphs for Mechanistically Grounded Therapeutic Prioritization17 Apr 2026
- 2026Federated Personal Knowledge Graph Completion with Lightweight Large Language Models for Personalized Recommendations25 Feb 2026
38 more
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- 2025A Vision Toward Energy-Efficient Domain-Specific Artificial Intelligence Models and Agents24 Oct 2025
- 2025Beyond Prefixes: Graph-as-Memory Cross-Attention for Knowledge Graph Completion with Large Language Models10 Oct 2025
- 2025Multilingual Knowledge Graph Completion via Efficient Multilingual Knowledge Sharing9 Oct 2025
- 2025KRAFT: A Knowledge Graph-Based Framework for Automated Map Conflation4 Sep 2025
- 2025Enhancing Large Language Model for Knowledge Graph Completion via Structure-Aware Alignment-Tuning1 Sep 2025
- 2025Logical Expressivity and Explanations for Monotonic GNNs with Scoring Functions14 Aug 2025
- 2025Learning to Evolve: Bayesian-Guided Continual Knowledge Graph Embedding4 Aug 2025
- 2025Context-Driven Knowledge Graph Completion with Semantic-Aware Relational Message Passing29 Jun 2025
- 2025Flow-Modulated Scoring for Semantic-Aware Knowledge Graph Completion29 Jun 2025
- 2025Fast and Distributed Equivariant Graph Neural Networks by Virtual Node Learning24 Jun 2025
- 2025Knowledge Graph Embeddings with Representing Relations as Annular Sectors6 Jun 2025
- 2025Two-dimensional Taxonomy for N-ary Knowledge Representation Learning Methods5 Jun 2025
- 2025Rethinking Regularization Methods for Knowledge Graph Completion29 May 2025
- 2025RSCF: Relation-Semantics Consistent Filter for Entity Embedding of Knowledge Graph27 May 2025
- 2025Is Architectural Complexity Overrated? Competitive and Interpretable Knowledge Graph Completion with RelatE25 May 2025
- 2025Fully Geometric Multi-Hop Reasoning on Knowledge Graphs with Transitive Relations18 May 2025
- 2025Social Biases in Knowledge Representations of Wikidata separates Global North from Global South5 May 2025
- 2025Hadamard product in deep learning: Introduction, Advances and Challenges17 Apr 2025
- 2025Optimal Embedding Guided Negative Sample Generation for Knowledge Graph Link Prediction4 Apr 2025
- 2025MuCo-KGC: Multi-Context-Aware Knowledge Graph Completion5 Mar 2025
- 2025GLTW: Joint Improved Graph Transformer and LLM via Three-Word Language for Knowledge Graph Completion17 Feb 2025
- 2025Large Language Models for Knowledge Graph Embedding: A Survey14 Jan 2025
- 2025Graph Contrastive Learning on Multi-label Classification for Recommendations13 Jan 2025
- 2025A Semantic Partitioning Method for Large-Scale Training of Knowledge Graph Embeddings8 Jan 2025
- 2024Efficient Relational Context Perception for Knowledge Graph Completion31 Dec 2024
- 2024A Contextualized BERT model for Knowledge Graph Completion15 Dec 2024
- 2024NumCoKE: Ordinal-Aware Numerical Reasoning over Knowledge Graphs with Mixture-of-Experts and Contrastive Learning20 Nov 2024
- 2024Fully Hyperbolic Rotation for Knowledge Graph Embedding6 Nov 2024
- 2024Bridging Stepwise Lab-Informed Pretraining and Knowledge-Guided Learning for Diagnostic Reasoning25 Oct 2024
- 2024Geometric Feature Enhanced Knowledge Graph Embedding and Spatial Reasoning24 Oct 2024
- 2024Knowledge Graph Embeddings: A Comprehensive Survey on Capturing Relation Properties16 Oct 2024
- 2024A Pluggable Common Sense-Enhanced Framework for Knowledge Graph Completion6 Oct 2024
- 2024KnowFormer: Revisiting Transformers for Knowledge Graph Reasoning19 Sep 2024
- 2024Hierarchical Blockmodelling for Knowledge Graphs28 Aug 2024
- 2024Simple but Effective Compound Geometric Operations for Temporal Knowledge Graph Completion13 Aug 2024
- 2024On The Expressive Power of Knowledge Graph Embedding Methods23 Jul 2024
50 newest of 133 All 133 (JSON)
- 2023Rethinking Language Models as Symbolic Knowledge Graphscited by 12
- 2024KnowFormer: Revisiting Transformers for Knowledge Graph Reasoningcited by 5
- 2024Bridging Stepwise Lab-Informed Pretraining and Knowledge-Guided Learning for Diagnostic Reasoningcited by 3
- 2022Differentiable Fuzzy ALC: A Neural-Symbolic Representation Language for Symbol Groundingcited by 1
- 2025Fully Geometric Multi-Hop Reasoning on Knowledge Graphs with Transitive Relationscited by 0
- 2025Fully Geometric Multi-Hop Reasoning on Knowledge Graphs with Transitive Relations18 May 2025
- 2024Bridging Stepwise Lab-Informed Pretraining and Knowledge-Guided Learning for Diagnostic Reasoning25 Oct 2024
- 2024KnowFormer: Revisiting Transformers for Knowledge Graph Reasoning19 Sep 2024
- 2023Rethinking Language Models as Symbolic Knowledge Graphs25 Aug 2023
- 2022Differentiable Fuzzy ALC: A Neural-Symbolic Representation Language for Symbol Grounding22 Nov 2022
- 2021Neural Bellman-Ford Networks: A General Graph Neural Network Framework for Link Predictioncited by 273
- 2022A Survey of Knowledge Graph Reasoning on Graph Types: Static, Dynamic, and Multimodalcited by 106
- 2021ConE: Cone Embeddings for Multi-Hop Reasoning over Knowledge Graphscited by 78
- 2023Knowledge Graphs: Opportunities and Challengescited by 70
- 2022A*Net: A Scalable Path-based Reasoning Approach for Knowledge Graphscited by 49
- 2021Topology-Aware Correlations Between Relations for Inductive Link Prediction in Knowledge Graphscited by 47
- 2022Knowledge Graph Contrastive Learning Based on Relation-Symmetrical Structurecited by 43
- 2022Knowledge Graph Embedding: A Survey from the Perspective of Representation Spacescited by 41
- 2021Modeling Heterogeneous Hierarchies with Relation-specific Hyperbolic Conescited by 38
- 2024KICGPT: Large Language Model with Knowledge in Context for Knowledge Graph Completioncited by 36
- 2022Contextual Semantic Embeddings for Ontology Subsumption Predictioncited by 31
- 2023IMF: Interactive Multimodal Fusion Model for Link Predictioncited by 28
12 most cited of 123 All 123 (JSON)
- 2026Pattern Over-Generalization of Knowledge Graph Embedding3 Sep 2026
- 2026Hierarchy-Aware Semantic Losses for Knowledge Graph Link Prediction24 Aug 2026
- 2026Beyond Triplet Plausibility: Relation Set Completion in Knowledge Graphs29 Jun 2026
- 2026RelBall: Relation Ball with Quaternion Rotation for Knowledge Graph Completion26 Jun 2026
- 2026Recipe-Controlled Decoder Audit for Structural Knowledge-Graph Completion12 Jun 2026
- 2026CORE: Cyclic Orthotope Relation Embedding for Knowledge Graph Completion11 May 2026
- 2026Graph Neural Network based Hierarchy-Aware Embeddings of Knowledge Graphs: Applications to Yeast Phenotype Prediction5 May 2026
- 2026Polaris: Coupled Orbital Polar Embeddings for Hierarchical Concept Learning30 Apr 2026
- 2026Large Language Models Meet Biomedical Knowledge Graphs for Mechanistically Grounded Therapeutic Prioritization17 Apr 2026
- 2026Federated Personal Knowledge Graph Completion with Lightweight Large Language Models for Personalized Recommendations25 Feb 2026
- 2026UltRAG: a Universal Simple Scalable Recipe for Knowledge Graph RAG28 Jan 2026
- 2025Enhancing Logical Expressiveness in Graph Neural Networks via Path-Neighbor Aggregation11 Nov 2025
12 newest of 123 All 123 (JSON)