Interpretable Inverse Design of Metal-Organic Frameworks with Large Language Model Agents
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Abstract (arXiv)
Inverse design of metal-organic frameworks (MOFs) requires navigating combinatorial spaces with costly property labels and opaque machine-learning models. We introduce LLM4MOF, a closed-loop multi-agent framework that converts a natural-language target into chemical hypotheses, constraints, diagnostic tests, and feedback. One agent proposes interpretable hypotheses over metal nodes, linkers, pore geometry, and functionality. Another converts them into constraints selecting MOFs defined by a node, linker, and topology. The Matchmaker forms four beams to attribute gains to geometry, chemistry, or metal choice: full hypothesis, chemistry, metal only, and random baseline. Blind to database landscapes, LLM4MOF enriches top performers across six adsorption, separation, and electronic-structure tasks within 400 evaluations. It also designs and live-simulates de novo MOFs spanning H2 storage, SF6 capture, and C2H6/C2H4 separation, deriving a distinct design rule for each objective. Under an identical nominal evaluation budget it consistently outperforms random search, Bayesian optimization, and genetic algorithms, and the outcome is insensitive to the language-model backend. All of this uses not a single property-labeled training structure, whereas generative alternatives train on thousands to hundreds of thousands. A new objective requires only a natural-language request: interpretable inverse design at a fraction of the data cost of existing approaches.
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References · 13
- 2017Attention Is All You Needcited by 60,361
- 2020Denoising Diffusion Probabilistic Modelscited by 21,076
- 2023Reflexion: Language Agents with Verbal Reinforcement Learningcited by 4,276
- 2023ChemCrow: Augmenting large-language models with chemistry toolscited by 631
- 2025SciToolAgent: A Knowledge Graph-Driven Scientific Agent for Multi-Tool Integrationcited by 43
- 2026InternAgent-1.5: A Unified Agentic Framework for Long-Horizon Autonomous Scientific Discoverycited by 27
- 2021Interpretable and Explainable Machine Learning for Materials Science and Chemistrycited by 26
- 2023MOFDiff: Coarse-grained Diffusion for Metal-Organic Framework Designcited by 24
- 2024Materials science in the era of large language models: a perspectivecited by 24
- 2024MOFFlow: Flow Matching for Structure Prediction of Metal-Organic Frameworkscited by 17
- 2023Rapid Design of Top-Performing Metal-Organic Frameworks with Qualitative Representations of Building Blockscited by 8
- 2026SimMOF: AI agent for Automated MOF Simulationscited by 5
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- 2026Large language model agents accelerate inverse design of metal-organic frameworks for gas separation
- 2026An LLM agent for end-to-end computational materials discovery
- 2025Reshaping MOFs text mining with a dynamic multi-agents framework of large language model
- 2025MOFGPT: Generative Design of Metal-Organic Frameworks using Language Models
- 2025L^2M^3OF: A Large Language Multimodal Model for Metal-Organic Frameworks
- 2025The Rise of Generative AI for Metal-Organic Framework Design and Synthesis
- 2025System of Agentic AI for the Discovery of Metal-Organic Frameworks
- 2025Building-Block Aware Generative Modeling for 3D Crystals of Metal Organic Frameworks