mlsanityData to 7 Oct 2026

SimMOF: AI agent for Automated MOF Simulations

arXiv 2603.29152 ↗First posted 31 Mar 2026cs.AIcited by 4

On the map: LLM agents and tool use → Medical and scientific domain agents

Abstract (arXiv)

Metal-organic frameworks (MOFs) offer a vast design space, and as such, computational simulations play a critical role in predicting their structural and physicochemical properties. However, MOF simulations remain difficult to access because reliable analysis require expert decisions for workflow construction, parameter selection, tool interoperability, and the preparation of computational ready structures. Here, we introduce SimMOF, a large language model based multi agent framework that automates end-to-end MOF simulation workflows from natural language queries. SimMOF translates user requests into dependency aware plans, generates runnable inputs, orchestrates multiple agents to execute simulations, and summarizes results with analysis aligned to the user query. Through representative case studies, we show that SimMOF enables adaptive and cognitively autonomous workflows that reflect the iterative and decision driven behavior of human researchers and as such provides a scalable foundation for data driven MOF research.

Key facts. Cited by 4 papers in the map (data through 7 Oct 2026). Placed in Medical and scientific domain agents, one of 16 directions in LLM agents and tool use. Builds on 16 of its 42 references that are in the map. First posted on arXiv 31 Mar 2026.

Builds on

16 of 42 references.

Closest ancestors · 3

Same direction, newest first

  1. 2026El Agente Quntur: A research collaborator agent for quantum chemistry4 Feb
  2. 2025ChemGraph: An Agentic Framework for Computational Chemistry Workflows3 Jun
  3. 2025El Agente: An Autonomous Agent for Quantum Chemistry5 May

Other references · 13

  1. 2024The Llama 3 Herd of Modelscited by 14,192
  2. 2020MiniLM: Deep Self-Attention Distillation for Task-Agnostic Compression of Pre-Trained Transformerscited by 1,414
  3. 2023ChemCrow: Augmenting large-language models with chemistry toolscited by 609
  4. 2022MACE: Higher Order Equivariant Message Passing Neural Networks for Fast and Accurate Force Fieldscited by 467
  5. 2025Towards Scientific Intelligence: A Survey of LLM-based Scientific Agentscited by 96
  6. 2025SciToolAgent: A Knowledge Graph-Driven Scientific Agent for Multi-Tool Integrationcited by 40
  7. 2025CURIE: Evaluating LLMs On Multitask Scientific Long Context Understanding and Reasoningcited by 28
  8. 2024Materials science in the era of large language models: a perspectivecited by 23
  9. 2025Understanding LLM Scientific Reasoning through Promptings and Model's Explanation on the Answerscited by 10
  10. 2025Aitomia: Your Intelligent Assistant for AI-Driven Atomistic and Quantum Chemical Simulationscited by 8
  11. 2025The Open DAC 2025 Dataset for Sorbent Discovery in Direct Air Capturecited by 7
  12. 2025MOFA: Discovering Materials for Carbon Capture with a GenAI- and Simulation-Based Workflowcited by 6
1 more
  1. 2025Towards Fully Automated Molecular Simulations: Multi-Agent Framework for Simulation Setup and Force Field Extractioncited by 3

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2026: 4.

4 papers.

Similar, not cited

Close in wording, no citation either way

  1. 2025System of Agentic AI for the Discovery of Metal-Organic Frameworks
  2. 2026An LLM agent for end-to-end computational materials discovery
  3. 2026MOF-VERIFY: A Failure-Aware Agentic Harness for MOF Hypothesis Verification
  4. 2025The Rise of Generative AI for Metal-Organic Framework Design and Synthesis
  5. 2026Enhancing Spatial Reasoning in Large Language Models for Metal-Organic Frameworks Structure Prediction
  6. 2025Reshaping MOFs text mining with a dynamic multi-agents framework of large language model
  7. 2025GENIUS: An Agentic AI Framework for Autonomous Design and Execution of Simulation Protocols
  8. 2025Flexible MOF Generation with Torsion-Aware Flow Matching