Weakly Supervised Teacher-Student Framework with Progressive Pseudo-mask Refinement for Gland Segmentation
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Abstract (arXiv)
Background and objectives: Colorectal cancer histopathological grading depends on accurate segmentation of glandular structures. Current deep learning approaches rely on large scale pixel level annotations that are labor intensive and difficult to obtain in routine clinical practice. Weakly supervised semantic segmentation offers a promising alternative. However, class activation map based methods often produce incomplete pseudo masks that emphasize highly discriminative regions and fail to supervise unannotated glandular structures. We propose a weakly supervised teacher student framework that leverages sparse pathologist annotations and an Exponential Moving Average stabilized teacher network to generate refined pseudo masks. Methods: The framework integrates confidence based filtering, adaptive fusion of teacher predictions with limited ground truth, and curriculum guided refinement to progressively segment unannotated glandular regions. The method was evaluated on an institutional colorectal cancer cohort from The Ohio State University Wexner Medical Center consisting of 60 hematoxylin and eosin stained whole slide images and on public datasets including the Gland Segmentation dataset, TCGA COAD, TCGA READ, and SPIDER. Results: On the Gland Segmentation dataset the framework achieved a mean Intersection over Union of 80.10 and a mean Dice coefficient of 89.10. Cross cohort evaluation demonstrated robust generalization on TCGA COAD and TCGA READ without additional annotations, while reduced performance on SPIDER reflected domain shift. Conclusions: The proposed framework provides an annotation efficient and generalizable approach for gland segmentation in colorectal histopathology.
Key facts. Cited by 1 paper in the map (data through 14 Oct 2026). Builds on 32 of its 53 references that are in the map. First posted on arXiv 9 Mar 2026.
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32 of 53 references.
References · 32
- 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,713
- 2014Microsoft COCO: Common Objects in Contextcited by 17,608
- 2015Learning Deep Features for Discriminative Localizationcited by 2,436
- 2018UNet++: A Nested U-Net Architecture for Medical Image Segmentationcited by 1,525
- 2015SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentationcited by 1,487
- 2018Attention U-Net: Learning Where to Look for the Pancreascited by 1,435
- 2018Learning Pixel-level Semantic Affinity with Image-level Supervision for Weakly Supervised Semantic Segmentationcited by 321
- 2021Medical Transformer: Gated Axial-Attention for Medical Image Segmentationcited by 320
- 2020Self-supervised Equivariant Attention Mechanism for Weakly Supervised Semantic Segmentationcited by 300
- 2019ResUNet++: An Advanced Architecture for Medical Image Segmentationcited by 211
- 2016Gland Segmentation in Colon Histology Images: The GlaS Challenge Contestcited by 203
- 2020Weakly-Supervised Semantic Segmentation via Sub-category Explorationcited by 145
20 more
- 2021Anti-Adversarially Manipulated Attributions for Weakly and Semi-Supervised Semantic Segmentationcited by 134
- 2021BBAM: Bounding Box Attribution Map for Weakly Supervised Semantic and Instance Segmentationcited by 105
- 2016DCAN: Deep Contour-Aware Networks for Accurate Gland Segmentationcited by 84
- 2022Class Re-Activation Maps for Weakly-Supervised Semantic Segmentationcited by 75
- 2021TransAttUnet: Multi-level Attention-guided U-Net with Transformer for Medical Image Segmentationcited by 60
- 2020KiU-Net: Towards Accurate Segmentation of Biomedical Images using Over-complete Representationscited by 49
- 2021Multi-Layer Pseudo-Supervision for Histopathology Tissue Semantic Segmentation using Patch-level Classification Labelscited by 43
- 2024A Comprehensive Survey on Data Augmentationcited by 40
- 2021Activation Modulation and Recalibration Scheme for Weakly Supervised Semantic Segmentationcited by 29
- 2023Domain Generalization in Computational Pathology: Survey and Guidelinescited by 29
- 2020A Weakly Supervised Consistency-based Learning Method for COVID-19 Segmentation in CT Imagescited by 24
- 2021TA-Net: Topology-Aware Network for Gland Segmentationcited by 17
- 2023DA-TransUNet: Integrating Spatial and Channel Dual Attention with Transformer U-Net for Medical Image Segmentationcited by 16
- 2022Online Easy Example Mining for Weakly-supervised Gland Segmentation from Histology Imagescited by 15
- 2025SPIDER: A Comprehensive Multi-Organ Supervised Pathology Dataset and Baseline Modelscited by 13
- 2023AME-CAM: Attentive Multiple-Exit CAM for Weakly Supervised Segmentation on MRI Brain Tumorcited by 8
- 2024Scribble Hides Class: Promoting Scribble-Based Weakly-Supervised Semantic Segmentation with Its Class Labelcited by 6
- 2026HistoMet: A Pan-Cancer Deep Learning Framework for Prognostic Prediction of Metastatic Progression and Site Tropism from Primary Tumor Histopathologycited by 3
- 2026RANGER: Sparsely-Gated Mixture-of-Experts with Adaptive Retrieval Re-ranking for Pathology Report Generationcited by 3
- 2025MorphGen: Morphology-Guided Representation Learning for Robust Single-Domain Generalization in Histopathological Cancer Classificationcited by 2
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