Data-driven registration and modeling of brain deformation for image-guided neurosurgery
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Abstract (arXiv)
Accurate compensation of brain deformation is critical for reliable image-guided neurosurgery. Surgical manipulation and tumor resection induce tissue motion, causing preoperative planning images to become misaligned with the intraoperative anatomy. In this review, we examine data-driven methods developed between 2020 and 2025 for brain deformation registration and modeling, with a particular focus on learning-based approaches. A comprehensive literature search was conducted in PubMed, IEEE Xplore, Scopus, and Web of Science using predefined inclusion and exclusion criteria for computational methods addressing brain deformation in neurosurgical imaging, resulting in 46 eligible studies. We provide a unified analysis of methodological strategies, including deep learning-based image registration, direct deformation field regression, synthesis-driven multimodal alignment, resection-aware architectures for handling missing correspondences, and hybrid models integrating biomechanical priors. We also examine dataset utilization, evaluation metrics, validation protocols, and the assessment of uncertainty and generalization across studies. While learning-based methods demonstrate promising accuracy and computational efficiency, current approaches remain limited by out-of-distribution robustness, standardized benchmarking, interpretability, and readiness for clinical deployment. Our review highlights these gaps and outlines future directions toward more robust, generalizable, and clinically translatable solutions for neurosurgical guidance. By organizing recent advances and critically assessing evaluation practices, this work provides a comprehensive reference for researchers and clinicians working on data-driven registration and modeling of brain deformation.
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References · 66
- 2017Attention Is All You Needcited by 59,932
- 2020An Image is Worth 16x16 Words: Transformers for Image Recognition at Scalecited by 29,915
- 2021Swin Transformer: Hierarchical Vision Transformer using Shifted Windowscited by 12,082
- 2015Dropout as a Bayesian Approximation: Representing Model Uncertainty in Deep Learningcited by 4,416
- 2014Going Deeper with Convolutionscited by 4,231
- 2017SuperPoint: Self-Supervised Interest Point Detection and Descriptioncited by 1,313
- 2018Learning deep representations by mutual information estimation and maximizationcited by 1,265
- 2018VoxelMorph: A Learning Framework for Deformable Medical Image Registrationcited by 657
- 2016LIFT: Learned Invariant Feature Transformcited by 305
- 2017Concrete Dropoutcited by 227
- 2018A Deep Learning Framework for Unsupervised Affine and Deformable Image Registrationcited by 160
- 2020SynthMorph: learning contrast-invariant registration without acquired imagescited by 137
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- 2020Large Deformation Diffeomorphic Image Registration with Laplacian Pyramid Networkscited by 136
- 2021Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learningcited by 125
- 2020Fast Symmetric Diffeomorphic Image Registration with Convolutional Neural Networkscited by 107
- 2019Recursive Cascaded Networks for Unsupervised Medical Image Registrationcited by 105
- 2018Weakly-Supervised Convolutional Neural Networks for Multimodal Image Registrationcited by 90
- 2017End-to-End Unsupervised Deformable Image Registration with a Convolutional Neural Networkcited by 75
- 2021Conditional Deformable Image Registration with Convolutional Neural Networkcited by 59
- 2023A survey on deep learning in medical image registration: new technologies, uncertainty, evaluation metrics, and beyondcited by 55
- 2024uniGradICON: A Foundation Model for Medical Image Registrationcited by 55
- 2022XMorpher: Full Transformer for Deformable Medical Image Registration via Cross Attentioncited by 46
- 2022textttGradICON: Approximate Diffeomorphisms via Gradient Inverse Consistencycited by 40
- 2019Simulation of hyperelastic materials in real-time using Deep Learningcited by 35
- 2021The Brain Tumor Sequence Registration (BraTS-Reg) Challenge: Establishing Correspondence Between Pre-Operative and Follow-up MRI Scans of Diffuse Glioma Patientscited by 32
- 2020Adversarial Uni- and Multi-modal Stream Networks for Multimodal Image Registrationcited by 25
- 2023A Robust and Interpretable Deep Learning Framework for Multi-modal Registration via Keypointscited by 25
- 2021PhysGNN: A Physics-Driven Graph Neural Network Based Model for Predicting Soft Tissue Deformation in Image-Guided Neurosurgerycited by 22
- 2019Learning Soft Tissue Behavior of Organs for Surgical Navigation with Convolutional Neural Networkscited by 19
- 2022Voxelmorph++ Going beyond the cranial vault with keypoint supervision and multi-channel instance optimisationcited by 19
- 2019Evaluation of MRI to ultrasound registration methods for brain shift correction: The CuRIOUS2018 Challengecited by 16
- 2024multiGradICON: A Foundation Model for Multimodal Medical Image Registrationcited by 16
- 2022Unsupervised Deformable Image Registration with Absent Correspondences in Pre-operative and Post-Recurrence Brain Tumor MRI Scanscited by 15
- 2018Adversarial Deformation Regularization for Training Image Registration Neural Networkscited by 10
- 2022Residual Aligner Networkcited by 10
- 2022Brain Tumor Sequence Registration with Non-iterative Coarse-to-fine Networks and Dual Deep Supervisioncited by 10
- 2023DISA: DIfferentiable Similarity Approximation for Universal Multimodal Registrationcited by 10
- 2024BrainMorph: A Foundational Keypoint Model for Robust and Flexible Brain MRI Registrationcited by 9
- 2024Unified Cross-Modal Medical Image Synthesis with Hierarchical Mixture of Product-of-Expertscited by 8
- 2018A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensationcited by 6
- 2021DeepPhysics: a physics aware deep learning framework for real-time simulationcited by 6
- 2022Unsupervised Method for Intra-patient Registration of Brain Magnetic Resonance Images based on Objective Function Weighting by Inverse Consistency: Contribution to the BraTS-Reg Challengecited by 5
- 20223D Inception-Based TransMorph: Pre- and Post-operative Multi-contrast MRI Registration in Brain Tumorscited by 5
- 2024Learning to Match 2D Keypoints Across Preoperative MR and Intraoperative Ultrasoundcited by 5
- 2025Learn2Reg 2024: New Benchmark Datasets Driving Progress on New Challengescited by 5
- 2022Driving Points Prediction For Abdominal Probabilistic Registrationcited by 4
- 2023Towards multi-modal anatomical landmark detection for ultrasound-guided brain tumor resection with contrastive learningcited by 4
- 2024Unsupervised Multimodal 3D Medical Image Registration with Multilevel Correlation Balanced Optimizationcited by 4
- 2019Biomechanical modeling and computer simulation of the brain during neurosurgerycited by 3
- 2023Towards Saner Deep Image Registrationcited by 3
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