mlsanityData to 7 Oct 2026

MoSE: Unveiling Structural Patterns in Graphs via Mixture of Subgraph Experts

arXiv 2509.09337 ↗First posted 11 Sep 2025cs.LG cs.AIcited by 3

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Abstract (arXiv)

While graph neural networks (GNNs) have achieved great success in learning from graph-structured data, their reliance on local, pairwise message passing restricts their ability to capture complex, high-order subgraph patterns. leading to insufficient structural expressiveness. Recent efforts have attempted to enhance structural expressiveness by integrating random walk kernels into GNNs. However, these methods are inherently designed for graph-level tasks, which limits their applicability to other downstream tasks such as node classification. Moreover, their fixed kernel configurations hinder the model's flexibility in capturing diverse subgraph structures. To address these limitations, this paper proposes a novel Mixture of Subgraph Experts (MoSE) framework for flexible and expressive subgraph-based representation learning across diverse graph tasks. Specifically, MoSE extracts informative subgraphs via anonymous walks and dynamically routes them to specialized experts based on structural semantics, enabling the model to capture diverse subgraph patterns with improved flexibility and interpretability. We further provide a theoretical analysis of MoSE's expressivity within the Subgraph Weisfeiler-Lehman (SWL) Test, proving that it is more powerful than SWL. Extensive experiments, together with visualizations of learned subgraph experts, demonstrate that MoSE not only outperforms competitive baselines but also provides interpretable insights into structural patterns learned by the model.

Key facts. Cited by 3 papers in the map (data through 7 Oct 2026). Builds on 26 of its 48 references that are in the map. First posted on arXiv 11 Sep 2025.

Builds on

26 of 48 references.

References · 26

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14 more
  1. 2023A Complete Expressiveness Hierarchy for Subgraph GNNs via Subgraph Weisfeiler-Lehman Testscited by 64
  2. 2023Graph Mixture of Experts: Learning on Large-Scale Graphs with Explicit Diversity Modelingcited by 63
  3. 2020ASGN: An Active Semi-supervised Graph Neural Network for Molecular Property Predictioncited by 58
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  6. 2015Steps Toward Deep Kernel Methods from Infinite Neural Networkscited by 28
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  8. 2024GraphMoRE: Mitigating Topological Heterogeneity via Mixture of Riemannian Expertscited by 23
  9. 2021Theoretically Improving Graph Neural Networks via Anonymous Walk Graph Kernelscited by 19
  10. 2022SCARA: Scalable Graph Neural Networks with Feature-Oriented Optimizationcited by 19
  11. 2024Graph Sparsification via Mixture of Graphscited by 17
  12. 2023Extending the Design Space of Graph Neural Networks by Rethinking Folklore Weisfeiler-Lehmancited by 13
  13. 2023SIGMA: An Efficient Heterophilous Graph Neural Network with Fast Global Aggregationcited by 10
  14. 2024Descriptive Kernel Convolution Network with Improved Random Walk Kernelcited by 5

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Citing papers per year: 2025: 1; 2026: 2.

3 papers.