Mapping the Minds of LLMs: A Graph-Based Analysis of Reasoning LLM
On the map: LLM reasoning → Prompting and chain-of-thought reasoning
Abstract (arXiv)
Recent advances in test-time scaling have enabled Large Language Models (LLMs) to display sophisticated reasoning abilities via extended Chain-of-Thought (CoT) generation. Despite their potential, these Reasoning LLMs (RLMs) often demonstrate counterintuitive and unstable behaviors, such as performance degradation under few-shot prompting, that challenge our current understanding of RLMs. In this work, we introduce a unified graph-based analytical framework for better modeling the reasoning processes of RLMs. Our method first clusters long, verbose CoT outputs into semantically coherent reasoning steps, then constructs directed reasoning graphs to capture contextual and logical dependencies among these steps. Through comprehensive analysis across models and prompting regimes, we reveal that structural properties, such as exploration density, branching, and convergence ratios, strongly correlate with reasoning accuracy. Our findings demonstrate how prompting strategies substantially reshape the internal reasoning structure of RLMs, directly affecting task outcomes. The proposed framework not only enables quantitative evaluation of reasoning quality beyond conventional metrics but also provides practical insights for prompt engineering and the cognitive analysis of LLMs. Code and resources will be released to facilitate future research in this direction.
Key facts. Cited by 21 papers in the map (data through 14 Oct 2026). Placed in Prompting and chain-of-thought reasoning, one of 17 directions in LLM reasoning. Builds on 12 of its 20 references that are in the map. First posted on arXiv 20 May 2025.
Builds on
12 of 20 references.
Closest ancestors · 1
Same direction, newest first
- 2025Towards Reasoning Era: A Survey of Long Chain-of-Thought for Reasoning Large Language Models12 Mar
Other references · 11
- 2025Qwen3 Technical Reportcited by 8,820
- 2025DeepSeek-R1: Incentivizing Reasoning Capability in LLMs via Reinforcement Learningcited by 6,330
- 2023GPQA: A Graduate-Level Google-Proof Q&A Benchmarkcited by 2,879
- 2024OpenAI o1 System Cardcited by 1,244
- 2024DeepSeek-V3 Technical Reportcited by 811
- 2024Do NOT Think That Much for 2+3=? On the Overthinking of o1-Like LLMscited by 570
- 2025Stop Overthinking: A Survey on Efficient Reasoning for Large Language Modelscited by 464
- 2025From System 1 to System 2: A Survey of Reasoning Large Language Modelscited by 320
- 2025Towards Thinking-Optimal Scaling of Test-Time Compute for LLM Reasoningcited by 119
- 2025The relationship between reasoning and performance in large language models--o3 (mini) thinks harder, not longercited by 41
- 2024Code Comprehension then Auditing for Unsupervised LLM Evaluationcited by 32
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Citing papers per year: 2025: 8; 2026: 13.
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- 2025Unveiling the Potential of Diffusion Large Language Model in Controllable Generationcited by 15
- 2025VistaWise: Building Cost-Effective Agent with Cross-Modal Knowledge Graph for Minecraftcited by 13
- 2025ContextNav: Towards Agentic Multimodal In-Context Learningcited by 10
- 2025The Shape of Reasoning: Topological Analysis of Reasoning Traces in Large Language Modelscited by 9
- 2025Do LLM Agents Know How to Ground, Recover, and Assess? A Benchmark for Epistemic Competence in Information-Seeking Agentscited by 7
- 2026Gated Differentiable Working Memory for Long-Context Language Modelingcited by 6
- 2026Towards a Mechanistic Understanding of Large Reasoning Models: A Survey of Training, Inference, and Failurescited by 6
- 2025ReJump: A Tree-Jump Representation for Analyzing and Improving LLM Reasoningcited by 5
- 2026Characterizing, Evaluating, and Optimizing Complex Reasoningcited by 5
- 2025Modeling Hierarchical Thinking in Large Reasoning Modelscited by 3
- 2026Transformers in the Dark: Navigating Unknown Search Spaces via Bandit Feedbackcited by 2
- 2026SliceGraph: Mapping Process Isomers in Multi-Run Chain-of-Thought Reasoningcited by 2
9 more
- 2025Bridging the Plausibility-Validity Gap by Fine-Tuning a Reasoning-Enhanced LLM for Chemical Synthesis and Discoverycited by 1
- 2026MINERVA-Cultural: A Benchmark for Cultural and Multilingual Long Video Reasoningcited by 1
- 2026Do LLMs Experience an Internal Polylogue? Investigating Reasoning through the Lens of Personascited by 1
- 2026TraceGraph: Shared Decision Landscapes for Diagnosing and Improving Agent Trajectoriescited by 1
- 2026Auditing Privacy Risks in LLM-Enhanced Graph Neural Networkscited by 0
- 2026From Concentration to Differentiation and Back: Routing Effective Rank in MoE Reasoning Cohortscited by 0
- 2026When Does Reasoning Help in Machine Translation? A Hierarchical Analysis of LRM Reasoning Tracescited by 0
- 2026Selecting Diverse SFT Traces Improves Post-RL Generalizationcited by 0
- 2026TRACE: Trajectory Selection for Parallel Scaling of Search Agentscited by 0
- 2026TRACE: Trajectory Selection for Parallel Scaling of Search Agents30 Sep 2026
- 2026Selecting Diverse SFT Traces Improves Post-RL Generalization27 Sep 2026
- 2026When Does Reasoning Help in Machine Translation? A Hierarchical Analysis of LRM Reasoning Traces18 Sep 2026
- 2026From Concentration to Differentiation and Back: Routing Effective Rank in MoE Reasoning Cohorts6 Sep 2026
- 2026Auditing Privacy Risks in LLM-Enhanced Graph Neural Networks26 Aug 2026
- 2026TraceGraph: Shared Decision Landscapes for Diagnosing and Improving Agent Trajectories29 May 2026
- 2026SliceGraph: Mapping Process Isomers in Multi-Run Chain-of-Thought Reasoning14 May 2026
- 2026Do LLMs Experience an Internal Polylogue? Investigating Reasoning through the Lens of Personas9 May 2026
- 2026Transformers in the Dark: Navigating Unknown Search Spaces via Bandit Feedback25 Mar 2026
- 2026Characterizing, Evaluating, and Optimizing Complex Reasoning9 Feb 2026
- 2026Gated Differentiable Working Memory for Long-Context Language Modeling19 Jan 2026
- 2026MINERVA-Cultural: A Benchmark for Cultural and Multilingual Long Video Reasoning15 Jan 2026
9 more
- 2026Towards a Mechanistic Understanding of Large Reasoning Models: A Survey of Training, Inference, and Failures11 Jan 2026
- 2025ReJump: A Tree-Jump Representation for Analyzing and Improving LLM Reasoning30 Nov 2025
- 2025Modeling Hierarchical Thinking in Large Reasoning Models25 Oct 2025
- 2025The Shape of Reasoning: Topological Analysis of Reasoning Traces in Large Language Models23 Oct 2025
- 2025ContextNav: Towards Agentic Multimodal In-Context Learning6 Oct 2025
- 2025Do LLM Agents Know How to Ground, Recover, and Assess? A Benchmark for Epistemic Competence in Information-Seeking Agents26 Sep 2025
- 2025VistaWise: Building Cost-Effective Agent with Cross-Modal Knowledge Graph for Minecraft26 Aug 2025
- 2025Bridging the Plausibility-Validity Gap by Fine-Tuning a Reasoning-Enhanced LLM for Chemical Synthesis and Discovery9 Jul 2025
- 2025Unveiling the Potential of Diffusion Large Language Model in Controllable Generation6 Jul 2025
- 2025The Shape of Reasoning: Topological Analysis of Reasoning Traces in Large Language Modelscited by 9
- 2026Towards a Mechanistic Understanding of Large Reasoning Models: A Survey of Training, Inference, and Failurescited by 6
- 2025ReJump: A Tree-Jump Representation for Analyzing and Improving LLM Reasoningcited by 5
- 2026Characterizing, Evaluating, and Optimizing Complex Reasoningcited by 5
- 2025Modeling Hierarchical Thinking in Large Reasoning Modelscited by 3
- 2026SliceGraph: Mapping Process Isomers in Multi-Run Chain-of-Thought Reasoningcited by 2
- 2025Bridging the Plausibility-Validity Gap by Fine-Tuning a Reasoning-Enhanced LLM for Chemical Synthesis and Discoverycited by 1
- 2026MINERVA-Cultural: A Benchmark for Cultural and Multilingual Long Video Reasoningcited by 1
- 2026Do LLMs Experience an Internal Polylogue? Investigating Reasoning through the Lens of Personascited by 1
- 2026From Concentration to Differentiation and Back: Routing Effective Rank in MoE Reasoning Cohortscited by 0
- 2026When Does Reasoning Help in Machine Translation? A Hierarchical Analysis of LRM Reasoning Tracescited by 0
- 2026Selecting Diverse SFT Traces Improves Post-RL Generalizationcited by 0
- 2026Selecting Diverse SFT Traces Improves Post-RL Generalization27 Sep 2026
- 2026When Does Reasoning Help in Machine Translation? A Hierarchical Analysis of LRM Reasoning Traces18 Sep 2026
- 2026From Concentration to Differentiation and Back: Routing Effective Rank in MoE Reasoning Cohorts6 Sep 2026
- 2026SliceGraph: Mapping Process Isomers in Multi-Run Chain-of-Thought Reasoning14 May 2026
- 2026Do LLMs Experience an Internal Polylogue? Investigating Reasoning through the Lens of Personas9 May 2026
- 2026Characterizing, Evaluating, and Optimizing Complex Reasoning9 Feb 2026
- 2026MINERVA-Cultural: A Benchmark for Cultural and Multilingual Long Video Reasoning15 Jan 2026
- 2026Towards a Mechanistic Understanding of Large Reasoning Models: A Survey of Training, Inference, and Failures11 Jan 2026
- 2025ReJump: A Tree-Jump Representation for Analyzing and Improving LLM Reasoning30 Nov 2025
- 2025Modeling Hierarchical Thinking in Large Reasoning Models25 Oct 2025
- 2025The Shape of Reasoning: Topological Analysis of Reasoning Traces in Large Language Models23 Oct 2025
- 2025Bridging the Plausibility-Validity Gap by Fine-Tuning a Reasoning-Enhanced LLM for Chemical Synthesis and Discovery9 Jul 2025
- 2025Unveiling the Potential of Diffusion Large Language Model in Controllable Generationcited by 15
- 2025VistaWise: Building Cost-Effective Agent with Cross-Modal Knowledge Graph for Minecraftcited by 13
- 2025Do LLM Agents Know How to Ground, Recover, and Assess? A Benchmark for Epistemic Competence in Information-Seeking Agentscited by 7
- 2025Do LLM Agents Know How to Ground, Recover, and Assess? A Benchmark for Epistemic Competence in Information-Seeking Agents26 Sep 2025
- 2025VistaWise: Building Cost-Effective Agent with Cross-Modal Knowledge Graph for Minecraft26 Aug 2025
- 2025Unveiling the Potential of Diffusion Large Language Model in Controllable Generation6 Jul 2025
- 2025ContextNav: Towards Agentic Multimodal In-Context Learningcited by 10
- 2026Gated Differentiable Working Memory for Long-Context Language Modelingcited by 6
- 2026Transformers in the Dark: Navigating Unknown Search Spaces via Bandit Feedbackcited by 2
- 2026TraceGraph: Shared Decision Landscapes for Diagnosing and Improving Agent Trajectoriescited by 1
- 2026Auditing Privacy Risks in LLM-Enhanced Graph Neural Networkscited by 0
- 2026TRACE: Trajectory Selection for Parallel Scaling of Search Agentscited by 0
- 2026TRACE: Trajectory Selection for Parallel Scaling of Search Agents30 Sep 2026
- 2026Auditing Privacy Risks in LLM-Enhanced Graph Neural Networks26 Aug 2026
- 2026TraceGraph: Shared Decision Landscapes for Diagnosing and Improving Agent Trajectories29 May 2026
- 2026Transformers in the Dark: Navigating Unknown Search Spaces via Bandit Feedback25 Mar 2026
- 2026Gated Differentiable Working Memory for Long-Context Language Modeling19 Jan 2026
Similar, not cited
Close in wording, no citation either way
- 2025Short-Path Prompting in LLMs: Analyzing Reasoning Instability and Solutions for Robust Performance
- 2025When Thinking Fails: The Pitfalls of Reasoning for Instruction-Following in LLMs
- 2025Innate Reasoning is Not Enough: In-Context Learning Enhances Reasoning Large Language Models with Less Overthinking
- 2026The Periodic Table of LLM Reasoning: A Structured Survey of Reasoning Paradigms, Methods, and Failure Modes
- 2025Unveiling the Key Factors for Distilling Chain-of-Thought Reasoning
- 2026ReEfBench: Quantifying the Reasoning Efficiency of LLMs
- 2022Towards Understanding Chain-of-Thought Prompting: An Empirical Study of What Matters
- 2024Demystifying Chains, Trees, and Graphs of Thoughts