mlsanityData to 14 Oct 2026

LLMs Outperform Experts on Challenging Biology Benchmarks

arXiv 2505.06108 ↗First posted 9 May 2025cs.LG cs.AI q-bio.QMcited by 9

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Abstract (arXiv)

This study systematically evaluates 27 frontier Large Language Models on eight biology benchmarks spanning molecular biology, genetics, cloning, virology, and biosecurity. Models from major AI developers released between November 2022 and April 2025 were assessed through ten independent runs per benchmark. The findings reveal dramatic improvements in biological capabilities. Top model performance increased more than 4-fold on the challenging text-only subset of the Virology Capabilities Test over the study period, with OpenAI's o3 now performing twice as well as expert virologists. Several models now match or exceed expert-level performance on other challenging benchmarks, including the biology subsets of GPQA and WMDP and LAB-Bench CloningScenarios. Contrary to expectations, chain-of-thought did not substantially improve performance over zero-shot evaluation, while extended reasoning features in o3-mini and Claude 3.7 Sonnet typically improved performance as predicted by inference scaling. Benchmarks such as PubMedQA and the MMLU and WMDP biology subsets exhibited performance plateaus well below 100%, suggesting benchmark saturation and errors in the underlying benchmark data. The analysis highlights the need for more sophisticated evaluation methodologies as AI systems continue to advance.

Key facts. Cited by 9 papers in the map (data through 14 Oct 2026). Builds on 18 of its 41 references that are in the map. First posted on arXiv 9 May 2025.

Builds on

18 of 41 references.

References · 18

  1. 2023GPT-4 Technical Reportcited by 18,396
  2. 2020Measuring Massive Multitask Language Understandingcited by 7,963
  3. 2023GPQA: A Graduate-Level Google-Proof Q&A Benchmarkcited by 2,879
  4. 2019PubMedQA: A Dataset for Biomedical Research Question Answeringcited by 1,288
  5. 2024The WMDP Benchmark: Measuring and Reducing Malicious Use With Unlearningcited by 509
  6. 2024FrontierMath: A Benchmark for Evaluating Advanced Mathematical Reasoning in AIcited by 243
  7. 2024Are We Done with MMLU?cited by 194
  8. 2024RE-Bench: Evaluating frontier AI R&D capabilities of language model agents against human expertscited by 175
  9. 2024LAB-Bench: Measuring Capabilities of Language Models for Biology Researchcited by 156
  10. 2024Adding Error Bars to Evals: A Statistical Approach to Language Model Evaluationscited by 148
  11. 2024Language agents achieve superhuman synthesis of scientific knowledgecited by 137
  12. 2025BixBench: a Comprehensive Benchmark for LLM-based Agents in Computational Biologycited by 89
6 more
  1. 2024CRISPR-GPT for Agentic Automation of Gene-editing Experimentscited by 58
  2. 2023BioPlanner: Automatic Evaluation of LLMs on Protocol Planning in Biologycited by 43
  3. 2025ChatBench: From Static Benchmarks to Human-AI Evaluationcited by 34
  4. 2025Virology Capabilities Test (VCT): A Multimodal Virology Q&A Benchmarkcited by 31
  5. 2024MedMax: Mixed-Modal Instruction Tuning for Training Biomedical Assistantscited by 6
  6. 2024Enterprise Benchmarks for Large Language Model Evaluationcited by 5

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Cited by year (2026 to 14 Oct)

Citing papers per year: 2025: 2; 2026: 7.

9 papers.

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  1. 2023Evaluating the Potential of Leading Large Language Models in Reasoning Biology Questions
  2. 2024Can Large Language Models Replace Data Scientists in Biomedical Research?
  3. 2025Biothreat Benchmark Generation Framework for Evaluating Frontier AI Models II: Benchmark Generation Process
  4. 2025Benchmarking Large Language Models on Multiple Tasks in Bioinformatics NLP with Prompting
  5. 2025RoBiologyDataChoiceQA: A Romanian Dataset for improving Biology understanding of Large Language Models
  6. 2025Measuring Scientific Capabilities of Language Models with a Systems Biology Dry Lab
  7. 2026BioEVAL: A global, multi-institutional benchmark of large language and multimodal models for bioengineering
  8. 2026ABC-Bench: An Agentic Bio-Capabilities Benchmark for Biosecurity