mlsanityData to 14 Oct 2026

ABC-Bench: An Agentic Bio-Capabilities Benchmark for Biosecurity

arXiv 2606.11150 ↗First posted 9 Jun 2026cs.AI cs.CYcited by 6

On the map: LLM agents and tool use → Medical and scientific domain agents

Abstract (arXiv)

Large language models (LLMs) are rapidly acquiring capabilities relevant to biological research, from literature synthesis to interpretation of experimental data. Increasingly, LLM agents can also perform in silico biology tasks that previously required experienced human biologists. These emerging AI capabilities offer new opportunities for scientific discovery and biomedical advances, but they also shift the landscape of biosecurity risks. To address this, we introduce the Agentic Bio-Capabilities Benchmark (ABC-Bench), a suite of tasks to measure agentic biosecurity-relevant capabilities. ABC-Bench evaluates LLM agents on both benign and dual-use biology tasks: writing code to operate liquid handling robots, designing DNA fragments for in vitro assembly, and evading DNA synthesis screening. These tasks require a combination of biology and software expertise. All tested LLM agents outperformed the median expert human baseliner on all three tasks. Agents performed highly on tasks drawing on published knowledge and well-documented protocols, and more weakly on a task requiring novel bioinformatics reasoning. In three wet-lab validation experiments, we found that OpenAI's o4-mini-high produced scripts that, when run on an OpenTrons liquid handling robot, successfully assembled DNA with expected sequences.

Key facts. Cited by 6 papers in the map (data through 14 Oct 2026). Placed in Medical and scientific domain agents, one of 16 directions in LLM agents and tool use. Builds on 16 of its 39 references that are in the map. First posted on arXiv 9 Jun 2026.

Builds on

16 of 39 references.

Closest ancestors · 3

Same direction, newest first

  1. 2025BixBench: a Comprehensive Benchmark for LLM-based Agents in Computational Biology28 Feb
  2. 2024BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments27 May
  3. 2024CRISPR-GPT for Agentic Automation of Gene-editing Experiments27 Apr

Other references · 13

  1. 2020Measuring Massive Multitask Language Understandingcited by 7,963
  2. 2023SWE-bench: Can Language Models Resolve Real-World GitHub Issues?cited by 3,373
  3. 2025gpt-oss-120b & gpt-oss-20b Model Cardcited by 1,386
  4. 2024Rethinking Machine Unlearning for Large Language Modelscited by 257
  5. 2024Cybench: A Framework for Evaluating Cybersecurity Capabilities and Risks of Language Modelscited by 164
  6. 2024LAB-Bench: Measuring Capabilities of Language Models for Biology Researchcited by 156
  7. 2024CORE-Bench: Fostering the Credibility of Published Research Through a Computational Reproducibility Agent Benchmarkcited by 123
  8. 2024DiscoveryBench: Towards Data-Driven Discovery with Large Language Modelscited by 109
  9. 2025Virology Capabilities Test (VCT): A Multimodal Virology Q&A Benchmarkcited by 31
  10. 2023BioCoder: A Benchmark for Bioinformatics Code Generation with Large Language Modelscited by 25
  11. 2025Align-Pro: A Principled Approach to Prompt Optimization for LLM Alignmentcited by 18
  12. 2025GeneBreaker: Jailbreak Attacks against DNA Language Models with Pathogenicity Guidancecited by 8
1 more
  1. 2025UniSite: The First Cross-Structure Dataset and Learning Framework for End-to-End Ligand Binding Site Detectioncited by 4

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Cited by year (2026 to 14 Oct)

Citing papers per year: 2026: 6.

6 papers.

Similar, not cited

Close in wording, no citation either way

  1. 2026BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics
  2. 2026LABBench2: An Improved Benchmark for AI Systems Performing Biology Research
  3. 2026Measuring Biological Capabilities and Risks of AI Agents
  4. 2026Evaluating Agentic Bioinformatics through Function, Evidence, and Validation
  5. 2026BABE: Biology Arena BEnchmark
  6. 2026Agentic BAIM-LLM Evaluation (ABLE): Benchmarking LLM Use of Protein Design Tools
  7. 2025BioProBench: A Corpus and Benchmark for Biological Protocol Reasoning in Autonomous Science
  8. 2026BixBench3: Benchmarking AI agents on research-study-scale computational biology tasks