BatGPT-Chem: A Foundation Large Model For Retrosynthesis Prediction
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Abstract (arXiv)
Retrosynthesis analysis is pivotal yet challenging in drug discovery and organic chemistry. Despite the proliferation of computational tools over the past decade, AI-based systems often fall short in generalizing across diverse reaction types and exploring alternative synthetic pathways. This paper presents BatGPT-Chem, a large language model with 15 billion parameters, tailored for enhanced retrosynthesis prediction. Integrating chemical tasks via a unified framework of natural language and SMILES notation, this approach synthesizes extensive instructional data from an expansive chemical database. Employing both autoregressive and bidirectional training techniques across over one hundred million instances, BatGPT-Chem captures a broad spectrum of chemical knowledge, enabling precise prediction of reaction conditions and exhibiting strong zero-shot capabilities. Superior to existing AI methods, our model demonstrates significant advancements in generating effective strategies for complex molecules, as validated by stringent benchmark tests. BatGPT-Chem not only boosts the efficiency and creativity of retrosynthetic analysis but also establishes a new standard for computational tools in synthetic design. This development empowers chemists to adeptly address the synthesis of novel compounds, potentially expediting the innovation cycle in drug manufacturing and materials science. We release our trial platform at urlhttps://www.batgpt.net/dapp/chem.
Key facts. Cited by 9 papers in the map (data through 7 Oct 2026). Builds on 14 of its 57 references that are in the map. First posted on arXiv 19 Aug 2024.
Builds on
14 of 57 references.
References · 14
- 2017Attention Is All You Needcited by 59,932
- 2023CMMLU: Measuring massive multitask language understanding in Chinesecited by 436
- 2023What can Large Language Models do in chemistry? A comprehensive benchmark on eight taskscited by 179
- 2020Retrosynthesis Prediction with Conditional Graph Logic Networkcited by 103
- 2023Empowering Molecule Discovery for Molecule-Caption Translation with Large Language Models: A ChatGPT Perspectivecited by 91
- 2020A Graph to Graphs Framework for Retrosynthesis Predictioncited by 85
- 2017Retrosynthetic reaction prediction using neural sequence-to-sequence modelscited by 82
- 2020RetroXpert: Decompose Retrosynthesis Prediction like a Chemistcited by 66
- 2021Permutation invariant graph-to-sequence model for template-free retrosynthesis and reaction predictioncited by 66
- 2020Learning Graph Models for Retrosynthesis Predictioncited by 64
- 2024Developing ChemDFM as a large language foundation model for chemistrycited by 51
- 2023Can Large Language Models Empower Molecular Property Prediction?cited by 43
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Citing papers per year: 2025: 8; 2026: 1.
9 papers.
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- 2025AOT*: Efficient Synthesis Planning via LLM-Empowered AND-OR Tree Searchcited by 13
- 2025SpindleKV: A Novel KV Cache Reduction Method Balancing Both Shallow and Deep Layerscited by 9
- 2025ChemPile: A 250GB Diverse and Curated Dataset for Chemical Foundation Modelscited by 7
- 2026Large Language Model Agent for User-friendly Chemical Process Simulationscited by 5
- 2025CoViPAL: Layer-wise Contextualized Visual Token Pruning for Large Vision-Language Modelscited by 4
- 2025Atom-anchored LLMs speak Chemistry: A Retrosynthesis Demonstrationcited by 4
- 2025RTMol: Rethinking Molecule-text Alignment in a Round-trip Viewcited by 1
- 2026Large Language Model Agent for User-friendly Chemical Process Simulations15 Jan 2026
- 2025RTMol: Rethinking Molecule-text Alignment in a Round-trip View15 Nov 2025
- 2025Atom-anchored LLMs speak Chemistry: A Retrosynthesis Demonstration18 Oct 2025
- 2025AOT*: Efficient Synthesis Planning via LLM-Empowered AND-OR Tree Search25 Sep 2025
- 2025CoViPAL: Layer-wise Contextualized Visual Token Pruning for Large Vision-Language Models24 Aug 2025
- 2025SpindleKV: A Novel KV Cache Reduction Method Balancing Both Shallow and Deep Layers9 Jul 2025
- 2025ChemPile: A 250GB Diverse and Curated Dataset for Chemical Foundation Models18 May 2025
- 2025LLM-Augmented Chemical Synthesis and Design Decision Programs11 May 2025
- 2025Position: Multimodal Large Language Models Can Significantly Advance Scientific Reasoning5 Feb 2025