mlsanityData to 14 Oct 2026

Zero Shot Health Trajectory Prediction Using Transformer

arXiv 2407.21124 ↗First posted 30 Jul 2024cs.LG cs.AI cs.CYcited by 77

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Abstract (arXiv)

Integrating modern machine learning and clinical decision-making has great promise for mitigating healthcare's increasing cost and complexity. We introduce the Enhanced Transformer for Health Outcome Simulation (ETHOS), a novel application of the transformer deep-learning architecture for analyzing high-dimensional, heterogeneous, and episodic health data. ETHOS is trained using Patient Health Timelines (PHTs)-detailed, tokenized records of health events-to predict future health trajectories, leveraging a zero-shot learning approach. ETHOS represents a significant advancement in foundation model development for healthcare analytics, eliminating the need for labeled data and model fine-tuning. Its ability to simulate various treatment pathways and consider patient-specific factors positions ETHOS as a tool for care optimization and addressing biases in healthcare delivery. Future developments will expand ETHOS' capabilities to incorporate a wider range of data types and data sources. Our work demonstrates a pathway toward accelerated AI development and deployment in healthcare.

Key facts. Cited by 77 papers in the map (data through 14 Oct 2026). Builds on 9 of its 38 references that are in the map. First posted on arXiv 30 Jul 2024.

Builds on

9 of 38 references.

References · 9

  1. 2017Attention Is All You Needcited by 60,361
  2. 2020Language Models are Few-Shot Learnerscited by 32,419
  3. 2016XGBoost: A Scalable Tree Boosting Systemcited by 5,166
  4. 2019A Multiscale Visualization of Attention in the Transformer Modelcited by 292
  5. 2020Language Models Are An Effective Patient Representation Learning Technique For Electronic Health Record Datacited by 87
  6. 2023Event Stream GPT: A Data Pre-processing and Modeling Library for Generative, Pre-trained Transformers over Continuous-time Sequences of Complex Eventscited by 46
  7. 2023DRG-LLaMA : Tuning LLaMA Model to Predict Diagnosis-related Group for Hospitalized Patientscited by 30
  8. 2023Using Sequences of Life-events to Predict Human Livescited by 27
  9. 2022Multimodal spatiotemporal graph neural networks for improved prediction of 30-day all-cause hospital readmissioncited by 14

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Cited by year (2026 to 14 Oct)

Citing papers per year: 2024: 3; 2025: 31; 2026: 43.

77 papers.

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  1. 2024Context Clues: Evaluating Long Context Models for Clinical Prediction Tasks on EHRscited by 39
  2. 2025Foundation Model of Electronic Medical Records for Adaptive Risk Estimationcited by 19
  3. 2025EHR-R1: A Reasoning-Enhanced Foundational Language Model for Electronic Health Record Analysiscited by 18
  4. 2025Multimodal Medical Code Tokenizercited by 14
  5. 2025Exploring Scaling Laws for EHR Foundation Modelscited by 12
  6. 2025Foundation models for electronic health records: representation dynamics and transferabilitycited by 11
  7. 2025FoMoH: A clinically meaningful foundation model evaluation for structured electronic health recordscited by 6
  8. 2026Tokenization Tradeoffs in Structured EHR Foundation Modelscited by 6
  9. 2025LabTOP: A Unified Model for Lab Test Outcome Prediction on Electronic Health Recordscited by 5
  10. 2025An Investigation of Memorization Risk in Healthcare Foundation Modelscited by 5
  11. 2026One Loss to Rule Them All: Marked Time-to-Event for Structured EHR Foundation Modelscited by 5
  12. 2025Generating Clinically Realistic EHR Data via a Hierarchy- and Semantics-Guided Transformercited by 4
38 more
  1. 2025MedRep: Medical Concept Representation for General Electronic Health Record Foundation Modelscited by 4
  2. 2025CEHR-XGPT: A Scalable Multi-Task Foundation Model for Electronic Health Recordscited by 4
  3. 2025Cross-Representation Benchmarking in Time-Series Electronic Health Records for Clinical Outcome Predictioncited by 4
  4. 2026Semantic Self-Distillation for Language Model Uncertaintycited by 4
  5. 2026Retrieval-aligned Tabular Foundation Models Enable Robust Clinical Risk Prediction in Electronic Health Records Under Real-world Constraintscited by 4
  6. 2024Interpretable Next-token Prediction via the Generalized Induction Headcited by 3
  7. 2025EHR2Path: Comprehensive Pathway-Level Modeling of Longitudinal Patient Trajectories from Multimodal Electronic Health Recordscited by 3
  8. 2025Foundation Models for Clinical Records at Health System Scalecited by 3
  9. 2025Quantifying surprise in clinical care: Detecting highly informative events in electronic health records with foundation modelscited by 3
  10. 2026The Taxonomies, Training, and Applications of Event Stream Modelling for Electronic Health Recordscited by 3
  11. 2026Scaling Recurrence-aware Foundation Models for Clinical Records via Next-Visit Predictioncited by 3
  12. 2025Representation Learning of Lab Values via Masked AutoEncoderscited by 2
  13. 2025One Patient, Many Contexts: Scaling Medical AI with Contextual Intelligencecited by 2
  14. 2026Efficient Generative Prediction for EHR Foundation Models: The SCOPE and REACH Estimatorscited by 2
  15. 2026LLMs can construct powerful representations and streamline sample-efficient supervised learningcited by 2
  16. 2026From Token to Token Pair: Efficient Prompt Compression for Large Language Models in Clinical Predictioncited by 2
  17. 2026PORTER: Language-Grounded Event Representations for Portable Structured EHR Foundation Modelscited by 2
  18. 2026EHR-MPC: Inference-Time Control for Sepsis Treatment with Generative Patient Digital Twinscited by 2
  19. 2024TrajGPT: Irregular Time-Series Representation Learning for Health Trajectory Analysiscited by 1
  20. 2025Interpretable Hybrid-Rule Temporal Point Processescited by 1
  21. 2025multivariateGPT: a decoder-only transformer for multivariate categorical and numeric datacited by 1
  22. 2025Federated Timeline Synthesis: Scalable and Private Methodology For Model Training and Deploymentcited by 1
  23. 2025Limits of Generative Pre-Training in Structured EMR Trajectories with Irregular Samplingcited by 1
  24. 2025Integrating Genomics into Multimodal EHR Foundation Modelscited by 1
  25. 2026From Statistical Fidelity to Clinical Consistency: Scalable Generation and Auditing of Synthetic Patient Trajectoriescited by 1
  26. 2026Handling and Interpreting Missing Modalities in Patient Clinical Trajectories via Autoregressive Sequence Modelingcited by 1
  27. 2026Foundation Models to Unlock Real-World Evidence from Nationwide Medical Claimscited by 1
  28. 2026Protecting patient privacy in clinical foundation models: Technical and legal perspectivescited by 1
  29. 2025Deep Causal Behavioral Policy Learning: Applications to Healthcarecited by 0
  30. 2025Scaling Electronic Health Record Foundation Models for Population Health Managementcited by 0
  31. 2025The NordDRG AI Benchmark for Large Language Modelscited by 0
  32. 2025PRISM-Consult: A Panel-of-Experts Architecture for Clinician-Aligned Diagnosiscited by 0
  33. 2025Stable Prediction of Adverse Events in Medical Time-Series Datacited by 0
  34. 2025Chronic Kidney Disease Prognosis Prediction Using Transformercited by 0
  35. 2025Toward Scalable Early Cancer Detection: Evaluating EHR-Based Predictive Models Against Traditional Screening Criteriacited by 0
  36. 2025PULSE-ICU: A Pretrained Unified Long-Sequence Encoder for Multi-task Prediction in Intensive Care Unitscited by 0
  37. 2025Coefficient of Variation Masking: A Volatility-Aware Strategy for EHR Foundation Modelscited by 0
  38. 2026NEST: Nested Event Stream Transformer for Sequences of Multisetscited by 0

50 most cited of 77 All 77 (JSON)