A Disease Labeler for Chinese Chest X-Ray Report Generation
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Abstract (arXiv)
In the field of medical image analysis, the scarcity of Chinese chest X-ray report datasets has hindered the development of technology for generating Chinese chest X-ray reports. On one hand, the construction of a Chinese chest X-ray report dataset is limited by the time-consuming and costly process of accurate expert disease annotation. On the other hand, a single natural language generation metric is commonly used to evaluate the similarity between generated and ground-truth reports, while the clinical accuracy and effectiveness of the generated reports rely on an accurate disease labeler (classifier). To address the issues, this study proposes a disease labeler tailored for the generation of Chinese chest X-ray reports. This labeler leverages a dual BERT architecture to handle diagnostic reports and clinical information separately and constructs a hierarchical label learning algorithm based on the affiliation between diseases and body parts to enhance text classification performance. Utilizing this disease labeler, a Chinese chest X-ray report dataset comprising 51,262 report samples was established. Finally, experiments and analyses were conducted on a subset of expert-annotated Chinese chest X-ray reports, validating the effectiveness of the proposed disease labeler.
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References · 13
- 2019CheXpert: A Large Chest Radiograph Dataset with Uncertainty Labels and Expert Comparisoncited by 1,410
- 2017ChestX-ray8: Hospital-scale Chest X-ray Database and Benchmarks on Weakly-Supervised Classification and Localization of Common Thorax Diseasescited by 969
- 2019MIMIC-CXR-JPG, a large publicly available database of labeled chest radiographscited by 590
- 2020CheXbert: Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERTcited by 329
- 2019PadChest: A large chest x-ray image dataset with multi-label annotated reportscited by 308
- 2020Revisiting Pre-Trained Models for Chinese Natural Language Processingcited by 262
- 2018Hybrid Retrieval-Generation Reinforced Agent for Medical Image Report Generationcited by 141
- 2019Clinically Accurate Chest X-Ray Report Generationcited by 138
- 2017NegBio: a high-performance tool for negation and uncertainty detection in radiology reportscited by 79
- 2020CheXpert++: Approximating the CheXpert labeler for Speed,Differentiability, and Probabilistic Outputcited by 23
- 2019Fine-tuning BERT for Joint Entity and Relation Extraction in Chinese Medical Textcited by 19
- 2023LEALLA: Learning Lightweight Language-agnostic Sentence Embeddings with Knowledge Distillationcited by 11
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- 2022LERT: A Linguistically-motivated Pre-trained Language Modelcited by 10
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