Unbalancedness in Neural Monge Maps Improves Unpaired Domain Translation
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Abstract (arXiv)
In optimal transport (OT), a Monge map is known as a mapping that transports a source distribution to a target distribution in the most cost-efficient way. Recently, multiple neural estimators for Monge maps have been developed and applied in diverse unpaired domain translation tasks, e.g. in single-cell biology and computer vision. However, the classic OT framework enforces mass conservation, which makes it prone to outliers and limits its applicability in real-world scenarios. The latter can be particularly harmful in OT domain translation tasks, where the relative position of a sample within a distribution is explicitly taken into account. While unbalanced OT tackles this challenge in the discrete setting, its integration into neural Monge map estimators has received limited attention. We propose a theoretically grounded method to incorporate unbalancedness into any Monge map estimator. We improve existing estimators to model cell trajectories over time and to predict cellular responses to perturbations. Moreover, our approach seamlessly integrates with the OT flow matching (OT-FM) framework. While we show that OT-FM performs competitively in image translation, we further improve performance by incorporating unbalancedness (UOT-FM), which better preserves relevant features. We hence establish UOT-FM as a principled method for unpaired image translation.
Key facts. Cited by 33 papers in the map (data through 14 Oct 2026). Builds on 38 of its 63 references that are in the map. First posted on arXiv 25 Nov 2023.
Builds on
38 of 63 references.
References · 38
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Citing papers per year: 2024: 8; 2025: 11; 2026: 14.
33 papers.
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- 2025Noise Hypernetworks: Amortizing Test-Time Compute in Diffusion Modelscited by 35
- 2024Wasserstein Flow Matching: Generative modeling over families of distributionscited by 28
- 2025Joint Velocity-Growth Flow Matching for Single-Cell Dynamics Modelingcited by 20
- 2024Multi-Modal and Multi-Attribute Generation of Single Cells with CFGencited by 12
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- 2024Robust Barycenter Estimation using Semi-Unbalanced Neural Optimal Transportcited by 9
- 2025Integrating Dynamical Systems Modeling with Spatiotemporal scRNA-seq Data Analysiscited by 9
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- 2025Towards generalizable single-cell perturbation modeling via the Conditional Monge Gapcited by 3
- 2025Diversified Flow Matching with Translation Identifiabilitycited by 2
- 2026Fast and Large-Scale Unbalanced Optimal Transport via its Semi-Dual and Adaptive Gradient Methodscited by 2
- 2026Beyond Continuity: Simulation-free Reconstruction of Discrete Branching Dynamics from Single-cell Snapshotscited by 2
- 2024Unsupervised Point Cloud Completion through Unbalanced Optimal Transportcited by 1
- 2024GeOT: A spatially explicit framework for evaluating spatio-temporal predictionscited by 1
- 2025Reweighted Flow Matching via Unbalanced OT for Label-free Long-tailed Generationcited by 1
- 2026WFR-MFM: One-Step Inference for Dynamic Unbalanced Optimal Transportcited by 1
- 2026CellBRIDGE: Learning Cellular Trajectories via Interaction-Aware Alignmentcited by 1
- 2026TracingFlow: A Simulation-Free Trajectory Inference Framework Based on Second-Order Dynamicscited by 1
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- 2026UOTIP: Unbalanced Optimal Transport Map for Unpaired Inverse Problemscited by 0
- 2026Conditional Neural Optimal Transport for Predicting Cellular Phenotypes from Molecular Structurecited by 0
- 2026Simulation-free Unbalanced Dynamic Optimal Transport with General Growth Penaltycited by 0
- 2026Dynamic Generalized Gromov-Wasserstein Optimal Transportcited by 0
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- 2026Unbalanced W-Flow: Unbalanced Wasserstein Drifting under Finite-Batch Marginal Fluctuationscited by 0
- 2026Unbalanced W-Flow: Unbalanced Wasserstein Drifting under Finite-Batch Marginal Fluctuations13 Oct 2026
- 2026Simultaneous Neural Optimal Transport29 Sep 2026
- 2026Dynamic Generalized Gromov-Wasserstein Optimal Transport17 Sep 2026
- 2026Simulation-free Unbalanced Dynamic Optimal Transport with General Growth Penalty4 Sep 2026
- 2026TracingFlow: A Simulation-Free Trajectory Inference Framework Based on Second-Order Dynamics21 Aug 2026
- 2026Conditional Neural Optimal Transport for Predicting Cellular Phenotypes from Molecular Structure14 Aug 2026
- 2026CellBRIDGE: Learning Cellular Trajectories via Interaction-Aware Alignment28 May 2026
- 2026UOTIP: Unbalanced Optimal Transport Map for Unpaired Inverse Problems20 May 2026
- 2026Domain Transfer Becomes Identifiable via a Single Alignment18 May 2026
- 2026Multiscale Supervised Unbalanced Optimal Transport Flow Matching15 May 2026
- 2026Beyond Continuity: Simulation-free Reconstruction of Discrete Branching Dynamics from Single-cell Snapshots1 May 2026
- 2026Fast and Large-Scale Unbalanced Optimal Transport via its Semi-Dual and Adaptive Gradient Methods11 Feb 2026
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- 2026WFR-MFM: One-Step Inference for Dynamic Unbalanced Optimal Transport28 Jan 2026
- 2026WFR-FM: Simulation-Free Dynamic Unbalanced Optimal Transport11 Jan 2026
- 2025Structured Matching via Cost-Regularized Unbalanced Optimal Transport24 Nov 2025
- 2025Diversified Flow Matching with Translation Identifiability4 Nov 2025
- 2025Simulation-free Structure Learning for Stochastic Population Dynamics18 Oct 2025
- 2025Reweighted Flow Matching via Unbalanced OT for Label-free Long-tailed Generation30 Sep 2025
- 2025Noise Hypernetworks: Amortizing Test-Time Compute in Diffusion Models13 Aug 2025
- 2025Joint Velocity-Growth Flow Matching for Single-Cell Dynamics Modeling19 May 2025
- 2025Inferring stochastic dynamics with growth from cross-sectional data19 May 2025
- 2025Variational Regularized Unbalanced Optimal Transport: Single Network, Least Action17 May 2025
- 2025Modeling Cell Dynamics and Interactions with Unbalanced Mean Field Schr"odinger Bridge16 May 2025
- 2025Towards generalizable single-cell perturbation modeling via the Conditional Monge Gap11 Apr 2025
- 2025Integrating Dynamical Systems Modeling with Spatiotemporal scRNA-seq Data Analysis14 Mar 2025
- 2024Wasserstein Flow Matching: Generative modeling over families of distributions1 Nov 2024
- 2024GeOT: A spatially explicit framework for evaluating spatio-temporal predictions15 Oct 2024
- 2024Robust Barycenter Estimation using Semi-Unbalanced Neural Optimal Transport4 Oct 2024
- 2024Unsupervised Point Cloud Completion through Unbalanced Optimal Transport3 Oct 2024
- 2024Scalable Simulation-free Entropic Unbalanced Optimal Transport3 Oct 2024
- 2024Identifiable Shared Component Analysis of Unpaired Multimodal Mixtures28 Sep 2024
- 2024Multi-Modal and Multi-Attribute Generation of Single Cells with CFGen16 Jul 2024
- 2024Disentangled Representation Learning with the Gromov-Monge Gap10 Jul 2024
- 2024Wasserstein Flow Matching: Generative modeling over families of distributionscited by 28
- 2025Joint Velocity-Growth Flow Matching for Single-Cell Dynamics Modelingcited by 20
- 2026WFR-FM: Simulation-Free Dynamic Unbalanced Optimal Transportcited by 6
- 2025Diversified Flow Matching with Translation Identifiabilitycited by 2
- 2025Reweighted Flow Matching via Unbalanced OT for Label-free Long-tailed Generationcited by 1
- 2026WFR-MFM: One-Step Inference for Dynamic Unbalanced Optimal Transportcited by 1
- 2026Multiscale Supervised Unbalanced Optimal Transport Flow Matchingcited by 0
- 2026Multiscale Supervised Unbalanced Optimal Transport Flow Matching15 May 2026
- 2026WFR-MFM: One-Step Inference for Dynamic Unbalanced Optimal Transport28 Jan 2026
- 2026WFR-FM: Simulation-Free Dynamic Unbalanced Optimal Transport11 Jan 2026
- 2025Diversified Flow Matching with Translation Identifiability4 Nov 2025
- 2025Reweighted Flow Matching via Unbalanced OT for Label-free Long-tailed Generation30 Sep 2025
- 2025Joint Velocity-Growth Flow Matching for Single-Cell Dynamics Modeling19 May 2025
- 2024Wasserstein Flow Matching: Generative modeling over families of distributions1 Nov 2024
- 2024Multi-Modal and Multi-Attribute Generation of Single Cells with CFGencited by 12
- 2025Modeling Cell Dynamics and Interactions with Unbalanced Mean Field Schr"odinger Bridgecited by 12
- 2025Variational Regularized Unbalanced Optimal Transport: Single Network, Least Actioncited by 11
- 2024Robust Barycenter Estimation using Semi-Unbalanced Neural Optimal Transportcited by 9
- 2025Integrating Dynamical Systems Modeling with Spatiotemporal scRNA-seq Data Analysiscited by 9
- 2024Scalable Simulation-free Entropic Unbalanced Optimal Transportcited by 5
- 2025Inferring stochastic dynamics with growth from cross-sectional datacited by 4
- 2024Disentangled Representation Learning with the Gromov-Monge Gapcited by 3
- 2024Identifiable Shared Component Analysis of Unpaired Multimodal Mixturescited by 3
- 2025Towards generalizable single-cell perturbation modeling via the Conditional Monge Gapcited by 3
- 2026Fast and Large-Scale Unbalanced Optimal Transport via its Semi-Dual and Adaptive Gradient Methodscited by 2
- 2026Beyond Continuity: Simulation-free Reconstruction of Discrete Branching Dynamics from Single-cell Snapshotscited by 2
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- 2026Simultaneous Neural Optimal Transport29 Sep 2026
- 2026Dynamic Generalized Gromov-Wasserstein Optimal Transport17 Sep 2026
- 2026Simulation-free Unbalanced Dynamic Optimal Transport with General Growth Penalty4 Sep 2026
- 2026TracingFlow: A Simulation-Free Trajectory Inference Framework Based on Second-Order Dynamics21 Aug 2026
- 2026Conditional Neural Optimal Transport for Predicting Cellular Phenotypes from Molecular Structure14 Aug 2026
- 2026CellBRIDGE: Learning Cellular Trajectories via Interaction-Aware Alignment28 May 2026
- 2026UOTIP: Unbalanced Optimal Transport Map for Unpaired Inverse Problems20 May 2026
- 2026Domain Transfer Becomes Identifiable via a Single Alignment18 May 2026
- 2026Beyond Continuity: Simulation-free Reconstruction of Discrete Branching Dynamics from Single-cell Snapshots1 May 2026
- 2026Fast and Large-Scale Unbalanced Optimal Transport via its Semi-Dual and Adaptive Gradient Methods11 Feb 2026
- 2025Structured Matching via Cost-Regularized Unbalanced Optimal Transport24 Nov 2025
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