mlsanityData to 14 Oct 2026

Large Language Models for Scientific Synthesis, Inference and Explanation

arXiv 2310.07984 ↗First posted 12 Oct 2023cs.AI cs.CEcited by 39

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Abstract (arXiv)

Large language models are a form of artificial intelligence systems whose primary knowledge consists of the statistical patterns, semantic relationships, and syntactical structures of language1. Despite their limited forms of "knowledge", these systems are adept at numerous complex tasks including creative writing, storytelling, translation, question-answering, summarization, and computer code generation. However, they have yet to demonstrate advanced applications in natural science. Here we show how large language models can perform scientific synthesis, inference, and explanation. We present a method for using general-purpose large language models to make inferences from scientific datasets of the form usually associated with special-purpose machine learning algorithms. We show that the large language model can augment this "knowledge" by synthesizing from the scientific literature. When a conventional machine learning system is augmented with this synthesized and inferred knowledge it can outperform the current state of the art across a range of benchmark tasks for predicting molecular properties. This approach has the further advantage that the large language model can explain the machine learning system's predictions. We anticipate that our framework will open new avenues for AI to accelerate the pace of scientific discovery.

Key facts. Cited by 39 papers in the map (data through 14 Oct 2026). Builds on 16 of its 39 references that are in the map. First posted on arXiv 12 Oct 2023.

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16 of 39 references.

References · 16

  1. 2020Language Models are Few-Shot Learnerscited by 32,419
  2. 2022Chain-of-Thought Prompting Elicits Reasoning in Large Language Modelscited by 12,459
  3. 2022Emergent Abilities of Large Language Modelscited by 2,512
  4. 2023Code Llama: Open Foundation Models for Codecited by 2,139
  5. 2019BioBERT: a pre-trained biomedical language representation model for biomedical text miningcited by 1,947
  6. 2022Large Language Models Encode Clinical Knowledgecited by 1,830
  7. 2019SciBERT: A Pretrained Language Model for Scientific Textcited by 1,414
  8. 2022Least-to-Most Prompting Enables Complex Reasoning in Large Language Modelscited by 1,407
  9. 2020Graph Contrastive Learning with Augmentationscited by 1,208
  10. 2017MoleculeNet: A Benchmark for Molecular Machine Learningcited by 1,051
  11. 2019Strategies for Pre-training Graph Neural Networkscited by 971
  12. 2022Galactica: A Large Language Model for Sciencecited by 744
4 more
  1. 2021Pre-training Molecular Graph Representation with 3D Geometrycited by 248
  2. 20213D Infomax improves GNNs for Molecular Property Predictioncited by 146
  3. 2019SMILES Transformer: Pre-trained Molecular Fingerprint for Low Data Drug Discoverycited by 90
  4. 2023Can ChatGPT be used to generate scientific hypotheses?cited by 21

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Cited by year (2026 to 14 Oct)

Citing papers per year: 2023: 2; 2024: 17; 2025: 16; 2026: 4.

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  1. 2024LLM-SR: Scientific Equation Discovery via Programming with Large Language Modelscited by 133
  2. 2024A Review of Large Language Models and Autonomous Agents in Chemistrycited by 99
  3. 2024A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discoverycited by 96
  4. 2025From Automation to Autonomy: A Survey on Large Language Models in Scientific Discoverycited by 93
  5. 2024Many Heads Are Better Than One: Improved Scientific Idea Generation by A LLM-Based Multi-Agent Systemcited by 68
  6. 2023Towards Self-Interpretable Graph-Level Anomaly Detectioncited by 41
  7. 2024SciAssess: Benchmarking LLM Proficiency in Scientific Literature Analysiscited by 41
  8. 2025TreeReview: A Dynamic Tree of Questions Framework for Deep and Efficient LLM-based Scientific Peer Reviewcited by 31
  9. 2024SciLitLLM: How to Adapt LLMs for Scientific Literature Understandingcited by 29
  10. 2024Large Language Models in Drug Discovery and Development: From Disease Mechanisms to Clinical Trialscited by 24
  11. 2024ChatGPT as Research Scientist: Probing GPT's Capabilities as a Research Librarian, Research Ethicist, Data Generator and Data Predictorcited by 21
  12. 2024Exploring the Frontiers of LLMs in Psychological Applications: A Comprehensive Reviewcited by 17
27 more
  1. 2024GOODAT: Towards Test-time Graph Out-of-Distribution Detectioncited by 17
  2. 2024Large Language Models Reflect Human Citation Patterns with a Heightened Citation Biascited by 17
  3. 2025Generating Computational Cognitive Models using Large Language Modelscited by 14
  4. 2024Causal Representation Learning from Multimodal Biomedical Observationscited by 13
  5. 2024Generative Adversarial Reviews: When LLMs Become the Criticcited by 12
  6. 2025Generative AI in Knowledge Work: Design Implications for Data Navigation and Decision-Makingcited by 9
  7. 2025From Hypothesis to Publication: A Comprehensive Survey of AI-Driven Research Support Systemscited by 8
  8. 2025Exploring Design of Multi-Agent LLM Dialogues for Research Ideationcited by 8
  9. 2025Mimicking the Physicist's Eye:A VLM-centric Approach for Physics Formula Discoverycited by 7
  10. 2025Normative Conflicts and Shallow AI Alignmentcited by 5
  11. 2025Synthetic Artifact Auditing: Tracing LLM-Generated Synthetic Data Usage in Downstream Applicationscited by 4
  12. 2025oMeBench: Towards Robust Benchmarking of LLMs in Organic Mechanism Elucidation and Reasoningcited by 4
  13. 2025Discovering Heuristics with Large Language Models (LLMs) for Mixed-Integer Programs: Single-Machine Schedulingcited by 4
  14. 2024ChatCell: Facilitating Single-Cell Analysis with Natural Languagecited by 3
  15. 2026EvoSci: A Bio-Inspired Multi-Agent Framework for the Evolution of Scientific Discoverycited by 3
  16. 2023Speculative Exploration on the Concept of Artificial Agents Conducting Autonomous Researchcited by 1
  17. 2024Fault Diagnosis in Power Grids with Large Language Modelcited by 1
  18. 2024Leveraging large language models for nano synthesis mechanism explanation: solid foundations or mere conjectures?cited by 1
  19. 2025Self-reflecting Large Language Models: A Hegelian Dialectical Approachcited by 1
  20. 2024Building Understandable Messaging for Policy and Evidence Review (BUMPER) with AIcited by 0
  21. 2025Synthesized Annotation Guidelines are Knowledge-Lite Boosters for Clinical Information Extractioncited by 0
  22. 2025Accelerating Reinforcement Learning Algorithms Convergence using Pre-trained Large Language Models as Tutors With Advice Reusingcited by 0
  23. 2025LOCA: Logical Chain Augmentation for Scientific Corpus Cleaningcited by 0
  24. 2025Socrates-Mol: Self-Oriented Cognitive Reasoning through Autonomous Trial-and-Error with Empirical-Bayesian Screening for Moleculescited by 0
  25. 2026SCALPEL: Selective Capability Ablation via Low-rank Parameter Editing for Large Language Model Interpretability Analysiscited by 0
  26. 2026HyGRAIL: Cost-Aware and Evidence-Grounded Scientific Hypothesis Discovery over Knowledge Graphscited by 0
  27. 2026ProCARE: Real-World Study Automation via Profile-Grounded Evidence Contractscited by 0