Generalization in Graph Neural Networks: Improved PAC-Bayesian Bounds on Graph Diffusion
Not on the map. Why?
Abstract (arXiv)
Graph neural networks are widely used tools for graph prediction tasks. Motivated by their empirical performance, prior works have developed generalization bounds for graph neural networks, which scale with graph structures in terms of the maximum degree. In this paper, we present generalization bounds that instead scale with the largest singular value of the graph neural network's feature diffusion matrix. These bounds are numerically much smaller than prior bounds for real-world graphs. We also construct a lower bound of the generalization gap that matches our upper bound asymptotically. To achieve these results, we analyze a unified model that includes prior works' settings (i.e., convolutional and message-passing networks) and new settings (i.e., graph isomorphism networks). Our key idea is to measure the stability of graph neural networks against noise perturbations using Hessians. Empirically, we find that Hessian-based measurements correlate with the observed generalization gaps of graph neural networks accurately. Optimizing noise stability properties for fine-tuning pretrained graph neural networks also improves test performance on several graph-level classification tasks.
Key facts. Cited by 39 papers in the map (data through 7 Oct 2026). Builds on 52 of its 67 references that are in the map. First posted on arXiv 9 Feb 2023.
Builds on
52 of 67 references.
References · 52
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2017Inductive Representation Learning on Large Graphscited by 6,284
- 2018How Powerful are Graph Neural Networks?cited by 4,355
- 2017Neural Message Passing for Quantum Chemistrycited by 3,460
- 2019A Comprehensive Survey on Graph Neural Networkscited by 2,906
- 2016Understanding deep learning requires rethinking generalizationcited by 1,657
- 2020Sharpness-Aware Minimization for Efficiently Improving Generalizationcited by 1,404
- 2018Averaging Weights Leads to Wider Optima and Better Generalizationcited by 1,194
- 2013Spectral Networks and Locally Connected Networks on Graphscited by 1,097
- 2017MoleculeNet: A Benchmark for Molecular Machine Learningcited by 1,037
- 2019Strategies for Pre-training Graph Neural Networkscited by 964
38 more
- 2018Weisfeiler and Leman Go Neural: Higher-order Graph Neural Networkscited by 878
- 2018Hierarchical Graph Representation Learning with Differentiable Poolingcited by 786
- 2017Spectrally-normalized margin bounds for neural networkscited by 681
- 2018Junction Tree Variational Autoencoder for Molecular Graph Generationcited by 647
- 2015Train faster, generalize better: Stability of stochastic gradient descentcited by 547
- 2017Computing Nonvacuous Generalization Bounds for Deep (Stochastic) Neural Networks with Many More Parameters than Training Datacited by 527
- 2019Fantastic Generalization Measures and Where to Find Themcited by 507
- 2017Representation Learning on Graphs: Methods and Applicationscited by 456
- 2017A PAC-Bayesian Approach to Spectrally-Normalized Margin Bounds for Neural Networkscited by 309
- 2018Stronger generalization bounds for deep nets via a compression approachcited by 306
- 2017Nearly-tight VC-dimension and pseudodimension bounds for piecewise linear neural networkscited by 304
- 2017Size-Independent Sample Complexity of Neural Networkscited by 289
- 2019A Fair Comparison of Graph Neural Networks for Graph Classificationcited by 244
- 2020Can Graph Neural Networks Count Substructures?cited by 235
- 2020How Neural Networks Extrapolate: From Feedforward to Graph Neural Networkscited by 218
- 2020Generalization and Representational Limits of Graph Neural Networkscited by 217
- 2018Learning a SAT Solver from Single-Bit Supervisioncited by 198
- 2019Graph Neural Tangent Kernel: Fusing Graph Neural Networks with Graph Kernelscited by 160
- 2020Machine Learning on Graphs: A Model and Comprehensive Taxonomycited by 156
- 2019What Can Neural Networks Reason About?cited by 155
- 2018Towards Understanding the Role of Over-Parametrization in Generalization of Neural Networkscited by 140
- 2016Discriminative Embeddings of Latent Variable Models for Structured Datacited by 130
- 2019A Primer on PAC-Bayesian Learningcited by 130
- 2020From Local Structures to Size Generalization in Graph Neural Networkscited by 119
- 2019A Short Note on Concentration Inequalities for Random Vectors with SubGaussian Normcited by 105
- 2020Expressive Power of Invariant and Equivariant Graph Neural Networkscited by 100
- 2020A PAC-Bayesian Approach to Generalization Bounds for Graph Neural Networkscited by 84
- 2019Stability and Generalization of Graph Convolutional Neural Networkscited by 81
- 2020The Complexity of Constrained Min-Max Optimizationcited by 81
- 2019Data-dependent Sample Complexity of Deep Neural Networks via Lipschitz Augmentationcited by 71
- 2019Approximation Ratios of Graph Neural Networks for Combinatorial Problemscited by 68
- 2022Theory of Graph Neural Networks: Representation and Learningcited by 60
- 2019Generalization bounds for deep convolutional neural networkscited by 58
- 2021Learning Theory Can (Sometimes) Explain Generalisation in Graph Neural Networkscited by 51
- 2020Distance-Based Regularisation of Deep Networks for Fine-Tuningcited by 47
- 2021Improved Regularization and Robustness for Fine-tuning in Neural Networkscited by 45
- 2013A PAC-Bayesian Tutorial with A Dropout Boundcited by 43
- 2022Robust Fine-Tuning of Deep Neural Networks with Hessian-based Generalization Guaranteescited by 34
50 most cited of 52 All 52 (JSON)
Built on by
Citing papers per year: 2023: 6; 2024: 20; 2025: 6; 2026: 7.
39 papers.
Sort:
- 2024GFT: Graph Foundation Model with Transferable Tree Vocabularycited by 82
- 2023Towards Understanding the Generalization of Graph Neural Networkscited by 41
- 2024Towards Graph Foundation Models: Learning Generalities Across Graphs via Task-Treescited by 30
- 2023Identification of Negative Transfers in Multitask Learning Using Surrogate Modelscited by 20
- 2024Scalable Multitask Learning Using Gradient-based Estimation of Task Affinitycited by 20
- 2024A Manifold Perspective on the Statistical Generalization of Graph Neural Networkscited by 16
- 2023Boosting Multitask Learning on Graphs through Higher-Order Task Affinitiescited by 15
- 2023Noise Stability Optimization for Finding Flat Minima: A Hessian-based Regularization Approachcited by 14
- 2023Graph Neural Networks for Road Safety Modeling: Datasets and Evaluations for Accident Analysiscited by 13
- 2024Weisfeiler-Leman at the margin: When more expressivity matterscited by 13
- 2024Towards Bridging Generalization and Expressivity of Graph Neural Networkscited by 12
- 2024Graph Classification via Reference Distribution Learning: Theory and Practicecited by 11
27 more
- 2024Graph Rewiring in GNNs to Mitigate Over-Squashing and Over-Smoothing: A Surveycited by 8
- 2024VC dimension of Graph Neural Networks with Pfaffian activation functionscited by 6
- 2024Deeper Insights into Deep Graph Convolutional Networks: Stability and Generalizationcited by 6
- 2025Scalable Multi-Objective and Meta Reinforcement Learning via Gradient Estimationcited by 6
- 2024PAC-Bayesian Adversarially Robust Generalization Bounds for Graph Neural Networkcited by 4
- 2024Generalization Error of Graph Neural Networks in the Mean-field Regimecited by 4
- 2024Generalization of Graph Neural Networks is Robust to Model Mismatchcited by 4
- 2024Towards Graph Foundation Models: A Study on the Generalization of Positional and Structural Encodingscited by 4
- 2026Towards A Unified PAC-Bayesian Framework for Norm-based Generalization Boundscited by 4
- 2023On the curvature of the loss landscapecited by 3
- 2024Asymptotic generalization error of a single-layer graph convolutional networkcited by 3
- 2024Foundations and Frontiers of Graph Learning Theorycited by 3
- 2026WinQ: Accelerating Quantization-Aware Training of Language Models Around Saddle Pointscited by 3
- 2024PAC-Bayesian Generalization Bounds for Knowledge Graph Representation Learningcited by 2
- 2025Generalization Performance of Hypergraph Neural Networkscited by 2
- 2025Statistical physics analysis of graph neural networks: Approaching optimality in the contextual stochastic block modelcited by 2
- 2025Understanding Generalization in Node and Link Predictioncited by 2
- 2024When narrower is better: the narrow width limit of Bayesian parallel branching neural networkscited by 1
- 2024Learning Tree-Structured Composition of Data Augmentationcited by 1
- 2026Topology-Aware PAC-Bayesian Generalization Analysis for Graph Neural Networkscited by 1
- 2024Generalization of Graph Neural Networks through the Lens of Homomorphismcited by 0
- 2025Efficient Data Selection for Training Genomic Perturbation Modelscited by 0
- 2025Learning Multimodal Embeddings for Traffic Accident Prediction and Causal Estimationcited by 0
- 2026One-Sided Matrix Completion from Ultra-Sparse Samplescited by 0
- 2026Graph Rewiring in GNNs to Mitigate Over-Squashing and Over-Smoothing: A Surveycited by 0
- 2026Rethinking Generalization in Graph Neural Networks: A Structural Complexity Perspectivecited by 0
- 2026PAC-Bayesian Adversarially Robust Generalization for Message Passing Graph Neural Networks: A Sensitivity Analysiscited by 0
- 2026PAC-Bayesian Adversarially Robust Generalization for Message Passing Graph Neural Networks: A Sensitivity Analysis4 Jun 2026
- 2026WinQ: Accelerating Quantization-Aware Training of Language Models Around Saddle Points17 May 2026
- 2026Rethinking Generalization in Graph Neural Networks: A Structural Complexity Perspective13 May 2026
- 2026Graph Rewiring in GNNs to Mitigate Over-Squashing and Over-Smoothing: A Survey1 May 2026
- 2026Topology-Aware PAC-Bayesian Generalization Analysis for Graph Neural Networks12 Apr 2026
- 2026One-Sided Matrix Completion from Ultra-Sparse Samples18 Jan 2026
- 2026Towards A Unified PAC-Bayesian Framework for Norm-based Generalization Bounds13 Jan 2026
- 2025Learning Multimodal Embeddings for Traffic Accident Prediction and Causal Estimation2 Dec 2025
- 2025Scalable Multi-Objective and Meta Reinforcement Learning via Gradient Estimation16 Nov 2025
- 2025Understanding Generalization in Node and Link Prediction1 Jul 2025
- 2025Efficient Data Selection for Training Genomic Perturbation Models18 Mar 2025
- 2025Statistical physics analysis of graph neural networks: Approaching optimality in the contextual stochastic block model3 Mar 2025
27 more
- 2025Generalization Performance of Hypergraph Neural Networks22 Jan 2025
- 2024Towards Graph Foundation Models: Learning Generalities Across Graphs via Task-Trees21 Dec 2024
- 2024Towards Graph Foundation Models: A Study on the Generalization of Positional and Structural Encodings10 Dec 2024
- 2024Graph Rewiring in GNNs to Mitigate Over-Squashing and Over-Smoothing: A Survey26 Nov 2024
- 2024GFT: Graph Foundation Model with Transferable Tree Vocabulary9 Nov 2024
- 2024Towards Bridging Generalization and Expressivity of Graph Neural Networks14 Oct 2024
- 2024Deeper Insights into Deep Graph Convolutional Networks: Stability and Generalization11 Oct 2024
- 2024Scalable Multitask Learning Using Gradient-based Estimation of Task Affinity9 Sep 2024
- 2024Learning Tree-Structured Composition of Data Augmentation26 Aug 2024
- 2024Generalization of Graph Neural Networks is Robust to Model Mismatch25 Aug 2024
- 2024Graph Classification via Reference Distribution Learning: Theory and Practice21 Aug 2024
- 2024When narrower is better: the narrow width limit of Bayesian parallel branching neural networks26 Jul 2024
- 2024Foundations and Frontiers of Graph Learning Theory3 Jul 2024
- 2024A Manifold Perspective on the Statistical Generalization of Graph Neural Networks7 Jun 2024
- 2024PAC-Bayesian Generalization Bounds for Knowledge Graph Representation Learning10 May 2024
- 2024Generalization of Graph Neural Networks through the Lens of Homomorphism10 Mar 2024
- 2024Weisfeiler-Leman at the margin: When more expressivity matters12 Feb 2024
- 2024Generalization Error of Graph Neural Networks in the Mean-field Regime10 Feb 2024
- 2024PAC-Bayesian Adversarially Robust Generalization Bounds for Graph Neural Network6 Feb 2024
- 2024Asymptotic generalization error of a single-layer graph convolutional network6 Feb 2024
- 2024VC dimension of Graph Neural Networks with Pfaffian activation functions22 Jan 2024
- 2023Graph Neural Networks for Road Safety Modeling: Datasets and Evaluations for Accident Analysis31 Oct 2023
- 2023On the curvature of the loss landscape10 Jul 2023
- 2023Boosting Multitask Learning on Graphs through Higher-Order Task Affinities24 Jun 2023
- 2023Noise Stability Optimization for Finding Flat Minima: A Hessian-based Regularization Approach14 Jun 2023
- 2023Towards Understanding the Generalization of Graph Neural Networks14 May 2023
- 2023Identification of Negative Transfers in Multitask Learning Using Surrogate Models25 Mar 2023
- 2024GFT: Graph Foundation Model with Transferable Tree Vocabularycited by 82
- 2023Towards Understanding the Generalization of Graph Neural Networkscited by 41
- 2024Towards Graph Foundation Models: Learning Generalities Across Graphs via Task-Treescited by 30
- 2023Identification of Negative Transfers in Multitask Learning Using Surrogate Modelscited by 20
- 2024Scalable Multitask Learning Using Gradient-based Estimation of Task Affinitycited by 20
- 2024A Manifold Perspective on the Statistical Generalization of Graph Neural Networkscited by 16
- 2023Boosting Multitask Learning on Graphs through Higher-Order Task Affinitiescited by 15
- 2023Noise Stability Optimization for Finding Flat Minima: A Hessian-based Regularization Approachcited by 14
- 2023Graph Neural Networks for Road Safety Modeling: Datasets and Evaluations for Accident Analysiscited by 13
- 2024Weisfeiler-Leman at the margin: When more expressivity matterscited by 13
- 2024Towards Bridging Generalization and Expressivity of Graph Neural Networkscited by 12
- 2024Graph Classification via Reference Distribution Learning: Theory and Practicecited by 11
12 most cited of 39 All 39 (JSON)
- 2026PAC-Bayesian Adversarially Robust Generalization for Message Passing Graph Neural Networks: A Sensitivity Analysis4 Jun 2026
- 2026WinQ: Accelerating Quantization-Aware Training of Language Models Around Saddle Points17 May 2026
- 2026Rethinking Generalization in Graph Neural Networks: A Structural Complexity Perspective13 May 2026
- 2026Graph Rewiring in GNNs to Mitigate Over-Squashing and Over-Smoothing: A Survey1 May 2026
- 2026Topology-Aware PAC-Bayesian Generalization Analysis for Graph Neural Networks12 Apr 2026
- 2026One-Sided Matrix Completion from Ultra-Sparse Samples18 Jan 2026
- 2026Towards A Unified PAC-Bayesian Framework for Norm-based Generalization Bounds13 Jan 2026
- 2025Learning Multimodal Embeddings for Traffic Accident Prediction and Causal Estimation2 Dec 2025
- 2025Scalable Multi-Objective and Meta Reinforcement Learning via Gradient Estimation16 Nov 2025
- 2025Understanding Generalization in Node and Link Prediction1 Jul 2025
- 2025Efficient Data Selection for Training Genomic Perturbation Models18 Mar 2025
- 2025Statistical physics analysis of graph neural networks: Approaching optimality in the contextual stochastic block model3 Mar 2025
12 newest of 39 All 39 (JSON)