mlsanityData to 7 Oct 2026

NeuralNEB -- Neural Networks can find Reaction Paths Fast

arXiv 2207.09971 ↗First posted 20 Jul 2022physics.comp-ph cs.LG physics.chem-phcited by 7

Not on the map. Why?

Abstract (arXiv)

Quantum mechanical methods like Density Functional Theory (DFT) are used with great success alongside efficient search algorithms for studying kinetics of reactive systems. However, DFT is prohibitively expensive for large scale exploration. Machine Learning (ML) models have turned out to be excellent emulators of small molecule DFT calculations and could possibly replace DFT in such tasks. For kinetics, success relies primarily on the models capability to accurately predict the Potential Energy Surface (PES) around transition-states and Minimal Energy Paths (MEPs). Previously this has not been possible due to scarcity of relevant data in the literature. In this paper we train state of the art equivariant Graph Neural Network (GNN)-based models on around 10.000 elementary reactions from the Transition1x dataset. We apply the models as potentials for the Nudged Elastic Band (NEB) algorithm and achieve a Mean Average Error (MAE) of 0.13+/-0.03 eV on barrier energies on unseen reactions. We compare the results against equivalent models trained on QM9 and ANI1x. We also compare with and outperform Density Functional based Tight Binding (DFTB) on both accuracy and computational resource. The implication is that ML models, given relevant data, are now at a level where they can be applied for downstream tasks in quantum chemistry transcending prediction of simple molecular features.

Key facts. Cited by 7 papers in the map (data through 7 Oct 2026). Builds on 10 of its 43 references that are in the map. First posted on arXiv 20 Jul 2022.

Builds on

10 of 43 references.

References · 10

  1. 2014Adam: A Method for Stochastic Optimizationcited by 36,960
  2. 2017Neural Message Passing for Quantum Chemistrycited by 3,460
  3. 2018Graph Neural Networks: A Review of Methods and Applicationscited by 1,571
  4. 2021Equivariant message passing for the prediction of tensorial properties and molecular spectracited by 438
  5. 2019A Gentle Introduction to Deep Learning for Graphscited by 107
  6. 2021Understanding Failures in Out-of-Distribution Detection with Deep Generative Modelscited by 89
  7. 2018Less is more: sampling chemical space with active learningcited by 80
  8. 2020Machine learning for electronically excited states of moleculescited by 30
  9. 2021Performance Analysis of Out-of-Distribution Detection on Various Trained Neural Networkscited by 9
  10. 2017Nudged elastic band calculations accelerated with Gaussian process regressioncited by 7

Built on by

Cited by year (2026 to 7 Oct)

Citing papers per year: 2022: 1; 2023: 1; 2024: 1; 2025: 3; 2026: 1.

7 papers.