Nudged elastic band calculations accelerated with Gaussian process regression
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Abstract (arXiv)
Minimum energy paths for transitions such as atomic and/or spin rearrangements in thermalized systems are the transition paths of largest statistical weight. Such paths are frequently calculated using the nudged elastic band method, where an initial path is iteratively shifted to the nearest minimum energy path. The computational effort can be large, especially when ab initio or electron density functional calculations are used to evaluate the energy and atomic forces. Here, we show how the number of such evaluations can be reduced by an order of magnitude using a Gaussian process regression approach where an approximate energy surface is generated and refined in each iteration. When the goal is to evaluate the transition rate within harmonic transition state theory, the evaluation of the Hessian matrix at the initial and final state minima can be carried out beforehand and used as input in the minimum energy path calculation, thereby improving stability and reducing the number of iterations needed for convergence. A Gaussian process model also provides an uncertainty estimate for the approximate energy surface, and this can be used to focus the calculations on the lesser-known part of the path, thereby reducing the number of needed energy and force evaluations to a half in the present calculations. The methodology is illustrated using the two-dimensional M"uller-Brown potential surface and performance assessed on an established benchmark involving 13 rearrangement transitions of a heptamer island on a solid surface.
Key facts. Cited by 7 papers in the map (data through 7 Oct 2026). First posted on arXiv 14 Jun 2017.
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Citing papers per year: 2021: 1; 2022: 1; 2023: 1; 2024: 1; 2025: 2; 2026: 1.
7 papers.
- 2022NeuralNEB -- Neural Networks can find Reaction Paths Fastcited by 7
- 2025Efficient Implementation of Gaussian Process Regression Accelerated Saddle Point Searches with Application to Molecular Reactionscited by 4
- 2021Active Learning for Saddle Point Calculationcited by 2
- 2023High Accuracy Uncertainty-Aware Interatomic Force Modeling with Equivariant Bayesian Neural Networkscited by 2
- 2024Estimating Reaction Barriers with Deep Reinforcement Learningcited by 1
- 2025Efficient Nudged Elastic Band Method using Neural Network Bayesian Algorithm Executioncited by 1
- 2026A Tutorial Review of Bayesian Optimization with Gaussian Processes to Accelerate Stationary Point Searchescited by 0
- 2026A Tutorial Review of Bayesian Optimization with Gaussian Processes to Accelerate Stationary Point Searches11 Mar 2026
- 2025Efficient Nudged Elastic Band Method using Neural Network Bayesian Algorithm Execution17 Dec 2025
- 2025Efficient Implementation of Gaussian Process Regression Accelerated Saddle Point Searches with Application to Molecular Reactions18 May 2025
- 2024Estimating Reaction Barriers with Deep Reinforcement Learning17 Jul 2024
- 2023High Accuracy Uncertainty-Aware Interatomic Force Modeling with Equivariant Bayesian Neural Networks5 Apr 2023
- 2022NeuralNEB -- Neural Networks can find Reaction Paths Fast20 Jul 2022
- 2021Active Learning for Saddle Point Calculation10 Aug 2021