Transferable Learning of Reaction Pathways from Geometric Priors
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Abstract (arXiv)
Identifying minimum-energy paths (MEPs) is crucial for understanding chemical reaction mechanisms but remains computationally demanding. We introduce MEPIN, a scalable machine-learning method for efficiently predicting MEPs from reactant and product configurations, without relying on transition-state geometries or pre-optimized reaction paths during training. The task is defined as predicting deviations from geometric interpolations along reaction coordinates. We address this task with a continuous reaction path model based on a symmetry-broken equivariant neural network that generates a flexible number of intermediate structures. The model is trained using an energy-based objective, with efficiency enhanced by incorporating geometric priors from geodesic interpolation as initial interpolations or pre-training objectives. Our approach generalizes across diverse chemical reactions and achieves accurate alignment with reference intrinsic reaction coordinates, as demonstrated on various small molecule reactions and [3+2] cycloadditions. Our method enables the exploration of large chemical reaction spaces with efficient, data-driven predictions of reaction pathways.
Key facts. Cited by 2 papers in the map (data through 14 Oct 2026). Builds on 16 of its 74 references that are in the map. First posted on arXiv 21 Apr 2025.
Builds on
16 of 74 references.
References · 16
- 2021Equivariant message passing for the prediction of tensorial properties and molecular spectracited by 441
- 2022Transition1x -- a Dataset for Building Generalizable Reactive Machine Learning Potentialscited by 37
- 2023Accurate transition state generation with an object-aware equivariant elementary reaction diffusion modelcited by 30
- 2024Doob's Lagrangian: A Sample-Efficient Variational Approach to Transition Path Samplingcited by 27
- 2023Diffusion-based Generative AI for Exploring Transition States from 2D Molecular Graphscited by 19
- 2024Transition Path Sampling with Improved Off-Policy Training of Diffusion Path Samplerscited by 10
- 2024Equivariant Symmetry Breaking Setscited by 9
- 2022NeuralNEB -- Neural Networks can find Reaction Paths Fastcited by 7
- 20233DReact: Geometric deep learning for chemical reactionscited by 7
- 2024Learning Collective Variables with Synthetic Data Augmentation through Physics-Inspired Geodesic Interpolationcited by 6
- 2024Generalized Flow Matching for Transition Dynamics Modelingcited by 4
- 2024React-OT: Optimal Transport for Generating Transition State in Chemical Reactionscited by 3
4 more
- 2025Implicit Neural Representations for Chemical Reaction Pathscited by 3
- 2024Generative Model for Constructing Reaction Path from Initial to Final Statescited by 1
- 2024StringNET: Neural Network based Variational Method for Transition Pathwayscited by 1
- 2025Efficient Transition State Searches by Freezing String Method with Graph Neural Network Potentialscited by 1
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Citing papers per year: 2026: 2.
2 papers.
- 2026A Priori Sampling of Transition States with Guided Diffusion26 Mar 2026
- 2026Scaling Autoregressive Models for Lattice Thermodynamics16 Mar 2026