Task-Agnostic Graph Explanations
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Abstract (arXiv)
Graph Neural Networks (GNNs) have emerged as powerful tools to encode graph-structured data. Due to their broad applications, there is an increasing need to develop tools to explain how GNNs make decisions given graph-structured data. Existing learning-based GNN explanation approaches are task-specific in training and hence suffer from crucial drawbacks. Specifically, they are incapable of producing explanations for a multitask prediction model with a single explainer. They are also unable to provide explanations in cases where the GNN is trained in a self-supervised manner, and the resulting representations are used in future downstream tasks. To address these limitations, we propose a Task-Agnostic GNN Explainer (TAGE) that is independent of downstream models and trained under self-supervision with no knowledge of downstream tasks. TAGE enables the explanation of GNN embedding models with unseen downstream tasks and allows efficient explanation of multitask models. Our extensive experiments show that TAGE can significantly speed up the explanation efficiency by using the same model to explain predictions for multiple downstream tasks while achieving explanation quality as good as or even better than current state-of-the-art GNN explanation approaches. Our code is pubicly available as part of the DIG library at https://github.com/divelab/DIG/tree/main/dig/xgraph/TAGE/.
Key facts. Cited by 20 papers in the map (data through 7 Oct 2026). Builds on 29 of its 44 references that are in the map. First posted on arXiv 16 Feb 2022.
Builds on
29 of 44 references.
References · 29
- 2019PyTorch: An Imperative Style, High-Performance Deep Learning Librarycited by 20,160
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2018How Powerful are Graph Neural Networks?cited by 4,355
- 2017Neural Message Passing for Quantum Chemistrycited by 3,460
- 2019Fast Graph Representation Learning with PyTorch Geometriccited by 2,414
- 2014Conditional Generative Adversarial Netscited by 2,152
- 2017Learning Important Features Through Propagating Activation Differencescited by 1,454
- 2016Variational Graph Auto-Encoderscited by 1,373
- 2018Learning deep representations by mutual information estimation and maximizationcited by 1,265
- 2018Graph Convolutional Neural Networks for Web-Scale Recommender Systemscited by 1,133
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17 more
- 2017MoleculeNet: A Benchmark for Molecular Machine Learningcited by 1,037
- 2019Strategies for Pre-training Graph Neural Networkscited by 964
- 2019GNNExplainer: Generating Explanations for Graph Neural Networkscited by 735
- 2019Graph Neural Networks for Social Recommendationcited by 711
- 2020Deep Graph Contrastive Representation Learningcited by 535
- 2016f-GAN: Training Generative Neural Samplers using Variational Divergence Minimizationcited by 504
- 2019InfoGraph: Unsupervised and Semi-supervised Graph-Level Representation Learning via Mutual Information Maximizationcited by 441
- 2020Parameterized Explainer for Graph Neural Networkcited by 423
- 2020Explainability in Graph Neural Networks: A Taxonomic Surveycited by 383
- 2021On Explainability of Graph Neural Networks via Subgraph Explorationscited by 280
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Citing papers per year: 2022: 2; 2023: 6; 2024: 3; 2025: 4; 2026: 5.
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- 2022Learning Hierarchical Protein Representations via Complete 3D Graph Networkscited by 54
- 2022FlowX: Towards Explainable Graph Neural Networks via Message Flowscited by 20
- 2023Towards Robust Fidelity for Evaluating Explainability of Graph Neural Networkscited by 16
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasetscited by 16
- 2023GNNX-BENCH: Unravelling the Utility of Perturbation-based GNN Explainers through In-depth Benchmarkingcited by 11
- 2024GOAt: Explaining Graph Neural Networks via Graph Output Attributioncited by 10
- 2023RegExplainer: Generating Explanations for Graph Neural Networks in Regression Taskscited by 9
- 2023Robust Ante-hoc Graph Explainer using Bilevel Optimizationcited by 4
- 2025RISE: Radius of Influence based Subgraph Extraction for 3D Molecular Graph Explanationcited by 3
- 2023Evaluating Link Prediction Explanations for Graph Neural Networkscited by 2
- 2025GnnXemplar: Exemplars to Explanations -- Natural Language Rules for Global GNN Interpretabilitycited by 2
- 2023Interpreting GNN-based IDS Detections Using Provenance Graph Structural Featurescited by 1
8 more
- 2026Revealing Combinatorial Reasoning of GNNs via Graph Concept Bottleneck Layercited by 1
- 2026UNR-Explainer: Counterfactual Explanations for Unsupervised Node Representation Learning Modelscited by 1
- 2026Relevant Walk Search for Explaining Graph Neural Networkscited by 1
- 2024PAC Learnability under Explanation-Preserving Graph Perturbationscited by 0
- 2024Explaining Graph Neural Networks for Node Similarity on Graphscited by 0
- 2025Versatile and Risk-Sensitive Cardiac Diagnosis via Graph-Based ECG Signal Representationcited by 0
- 2026TACENR: Task-Agnostic Contrastive Explanations for Node Representationscited by 0
- 2026Protein Representation Learning with Secondary-Structure and Energy-Filtered Hydrogen-Bond Graphscited by 0
- 2026Protein Representation Learning with Secondary-Structure and Energy-Filtered Hydrogen-Bond Graphs12 Jun 2026
- 2026Relevant Walk Search for Explaining Graph Neural Networks22 May 2026
- 2026UNR-Explainer: Counterfactual Explanations for Unsupervised Node Representation Learning Models17 May 2026
- 2026TACENR: Task-Agnostic Contrastive Explanations for Node Representations21 Apr 2026
- 2026Revealing Combinatorial Reasoning of GNNs via Graph Concept Bottleneck Layer2 Mar 2026
- 2025Versatile and Risk-Sensitive Cardiac Diagnosis via Graph-Based ECG Signal Representation11 Nov 2025
- 2025GnnXemplar: Exemplars to Explanations -- Natural Language Rules for Global GNN Interpretability22 Sep 2025
- 2025RISE: Radius of Influence based Subgraph Extraction for 3D Molecular Graph Explanation4 May 2025
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasets4 Feb 2025
- 2024Explaining Graph Neural Networks for Node Similarity on Graphs10 Jul 2024
- 2024PAC Learnability under Explanation-Preserving Graph Perturbations7 Feb 2024
- 2024GOAt: Explaining Graph Neural Networks via Graph Output Attribution26 Jan 2024
8 more
- 2023Towards Robust Fidelity for Evaluating Explainability of Graph Neural Networks3 Oct 2023
- 2023GNNX-BENCH: Unravelling the Utility of Perturbation-based GNN Explainers through In-depth Benchmarking3 Oct 2023
- 2023Evaluating Link Prediction Explanations for Graph Neural Networks3 Aug 2023
- 2023RegExplainer: Generating Explanations for Graph Neural Networks in Regression Tasks15 Jul 2023
- 2023Interpreting GNN-based IDS Detections Using Provenance Graph Structural Features1 Jun 2023
- 2023Robust Ante-hoc Graph Explainer using Bilevel Optimization25 May 2023
- 2022Learning Hierarchical Protein Representations via Complete 3D Graph Networks26 Jul 2022
- 2022FlowX: Towards Explainable Graph Neural Networks via Message Flows26 Jun 2022
- 2022Learning Hierarchical Protein Representations via Complete 3D Graph Networkscited by 54
- 2022FlowX: Towards Explainable Graph Neural Networks via Message Flowscited by 20
- 2023Towards Robust Fidelity for Evaluating Explainability of Graph Neural Networkscited by 16
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasetscited by 16
- 2023GNNX-BENCH: Unravelling the Utility of Perturbation-based GNN Explainers through In-depth Benchmarkingcited by 11
- 2024GOAt: Explaining Graph Neural Networks via Graph Output Attributioncited by 10
- 2023RegExplainer: Generating Explanations for Graph Neural Networks in Regression Taskscited by 9
- 2023Robust Ante-hoc Graph Explainer using Bilevel Optimizationcited by 4
- 2025RISE: Radius of Influence based Subgraph Extraction for 3D Molecular Graph Explanationcited by 3
- 2023Evaluating Link Prediction Explanations for Graph Neural Networkscited by 2
- 2025GnnXemplar: Exemplars to Explanations -- Natural Language Rules for Global GNN Interpretabilitycited by 2
- 2023Interpreting GNN-based IDS Detections Using Provenance Graph Structural Featurescited by 1
12 most cited of 19 All 19 (JSON)
- 2026Protein Representation Learning with Secondary-Structure and Energy-Filtered Hydrogen-Bond Graphs12 Jun 2026
- 2026Relevant Walk Search for Explaining Graph Neural Networks22 May 2026
- 2026UNR-Explainer: Counterfactual Explanations for Unsupervised Node Representation Learning Models17 May 2026
- 2026TACENR: Task-Agnostic Contrastive Explanations for Node Representations21 Apr 2026
- 2025Versatile and Risk-Sensitive Cardiac Diagnosis via Graph-Based ECG Signal Representation11 Nov 2025
- 2025GnnXemplar: Exemplars to Explanations -- Natural Language Rules for Global GNN Interpretability22 Sep 2025
- 2025RISE: Radius of Influence based Subgraph Extraction for 3D Molecular Graph Explanation4 May 2025
- 2025No Metric to Rule Them All: Toward Principled Evaluations of Graph-Learning Datasets4 Feb 2025
- 2024Explaining Graph Neural Networks for Node Similarity on Graphs10 Jul 2024
- 2024PAC Learnability under Explanation-Preserving Graph Perturbations7 Feb 2024
- 2024GOAt: Explaining Graph Neural Networks via Graph Output Attribution26 Jan 2024
- 2023Towards Robust Fidelity for Evaluating Explainability of Graph Neural Networks3 Oct 2023
12 newest of 19 All 19 (JSON)