Positional Encoder Graph Neural Networks for Geographic Data
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Abstract (arXiv)
Graph neural networks (GNNs) provide a powerful and scalable solution for modeling continuous spatial data. However, they often rely on Euclidean distances to construct the input graphs. This assumption can be improbable in many real-world settings, where the spatial structure is more complex and explicitly non-Euclidean (e.g., road networks). Here, we propose PE-GNN, a new framework that incorporates spatial context and correlation explicitly into the models. Building on recent advances in geospatial auxiliary task learning and semantic spatial embeddings, our proposed method (1) learns a context-aware vector encoding of the geographic coordinates and (2) predicts spatial autocorrelation in the data in parallel with the main task. On spatial interpolation and regression tasks, we show the effectiveness of our approach, improving performance over different state-of-the-art GNN approaches. We observe that our approach not only vastly improves over the GNN baselines, but can match Gaussian processes, the most commonly utilized method for spatial interpolation problems.
Key facts. Cited by 20 papers in the map (data through 14 Oct 2026). Builds on 20 of its 41 references that are in the map. First posted on arXiv 19 Nov 2021.
Builds on
20 of 41 references.
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8 more
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Citing papers per year: 2022: 2; 2023: 4; 2024: 7; 2025: 4; 2026: 3.
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- 2023Geographic Location Encoding with Spherical Harmonics and Sinusoidal Representation Networkscited by 61
- 2025Graph ODEs and Beyond: A Comprehensive Survey on Integrating Differential Equations with Graph Neural Networkscited by 14
- 2023Neural Bayes Estimators for Irregular Spatial Data using Graph Neural Networkscited by 13
- 2023GeoMultiTaskNet: remote sensing unsupervised domain adaptation using geographical coordinatescited by 12
- 2024Non-Neighbors Also Matter to Kriging: A New Contrastive-Prototypical Learningcited by 5
- 2022Forecasting West Nile Virus with Graph Neural Networks: Harnessing Spatial Dependence in Irregularly Sampled Geospatial Datacited by 4
- 2024Spatioformer: A Geo-encoded Transformer for Large-Scale Plant Species Richness Predictioncited by 4
- 2022Graph Neural Networks with Precomputed Node Featurescited by 3
- 2023Inductive biases in deep learning models for weather predictioncited by 3
- 2024Beyond Grid Data: Exploring Graph Neural Networks for Earth Observationcited by 3
- 2026Mobility-Embedded POIs: Learning What A Place Is and How It Is Used from Human Movementcited by 3
- 2024Positional Encoder Graph Quantile Neural Networks for Geographic Datacited by 1
8 more
- 2024Disentangled and Self-Explainable Node Representation Learningcited by 1
- 2025Urban Incident Prediction with Graph Neural Networks: Integrating Government Ratings and Crowdsourced Reportscited by 1
- 2024Spatial Transfer Learning with Simple MLPcited by 0
- 2024Introduction to Graph Neural Networks for Machine Learning Engineerscited by 0
- 2025On the use of Graphs for Satellite Image Time Seriescited by 0
- 2025RelMap: Reliable Spatiotemporal Sensor Data Visualization via Imputative Spatial Interpolationcited by 0
- 2026Multi-Modal Spatio-Temporal Graph Neural Network with Mixture of Experts for Soil Organic Carbon Predictioncited by 0
- 2026SalAngaBhava: A Sinhala Market Dataset for Aspect-based Sentiment Analysiscited by 0
- 2026SalAngaBhava: A Sinhala Market Dataset for Aspect-based Sentiment Analysis6 Jul 2026
- 2026Multi-Modal Spatio-Temporal Graph Neural Network with Mixture of Experts for Soil Organic Carbon Prediction15 Jun 2026
- 2026Mobility-Embedded POIs: Learning What A Place Is and How It Is Used from Human Movement29 Jan 2026
- 2025RelMap: Reliable Spatiotemporal Sensor Data Visualization via Imputative Spatial Interpolation2 Aug 2025
- 2025Urban Incident Prediction with Graph Neural Networks: Integrating Government Ratings and Crowdsourced Reports10 Jun 2025
- 2025On the use of Graphs for Satellite Image Time Series22 May 2025
- 2025Graph ODEs and Beyond: A Comprehensive Survey on Integrating Differential Equations with Graph Neural Networks29 Mar 2025
- 2024Introduction to Graph Neural Networks for Machine Learning Engineers27 Dec 2024
- 2024Beyond Grid Data: Exploring Graph Neural Networks for Earth Observation5 Nov 2024
- 2024Disentangled and Self-Explainable Node Representation Learning28 Oct 2024
- 2024Spatioformer: A Geo-encoded Transformer for Large-Scale Plant Species Richness Prediction25 Oct 2024
- 2024Positional Encoder Graph Quantile Neural Networks for Geographic Data27 Sep 2024
8 more
- 2024Spatial Transfer Learning with Simple MLP5 May 2024
- 2024Non-Neighbors Also Matter to Kriging: A New Contrastive-Prototypical Learning23 Jan 2024
- 2023Geographic Location Encoding with Spherical Harmonics and Sinusoidal Representation Networks10 Oct 2023
- 2023Neural Bayes Estimators for Irregular Spatial Data using Graph Neural Networks4 Oct 2023
- 2023GeoMultiTaskNet: remote sensing unsupervised domain adaptation using geographical coordinates16 Apr 2023
- 2023Inductive biases in deep learning models for weather prediction6 Apr 2023
- 2022Forecasting West Nile Virus with Graph Neural Networks: Harnessing Spatial Dependence in Irregularly Sampled Geospatial Data21 Dec 2022
- 2022Graph Neural Networks with Precomputed Node Features1 Jun 2022
- 2023Geographic Location Encoding with Spherical Harmonics and Sinusoidal Representation Networkscited by 61
- 2025Graph ODEs and Beyond: A Comprehensive Survey on Integrating Differential Equations with Graph Neural Networkscited by 14
- 2023Neural Bayes Estimators for Irregular Spatial Data using Graph Neural Networkscited by 13
- 2023GeoMultiTaskNet: remote sensing unsupervised domain adaptation using geographical coordinatescited by 12
- 2024Non-Neighbors Also Matter to Kriging: A New Contrastive-Prototypical Learningcited by 5
- 2022Forecasting West Nile Virus with Graph Neural Networks: Harnessing Spatial Dependence in Irregularly Sampled Geospatial Datacited by 4
- 2024Spatioformer: A Geo-encoded Transformer for Large-Scale Plant Species Richness Predictioncited by 4
- 2022Graph Neural Networks with Precomputed Node Featurescited by 3
- 2023Inductive biases in deep learning models for weather predictioncited by 3
- 2024Beyond Grid Data: Exploring Graph Neural Networks for Earth Observationcited by 3
- 2026Mobility-Embedded POIs: Learning What A Place Is and How It Is Used from Human Movementcited by 3
- 2024Positional Encoder Graph Quantile Neural Networks for Geographic Datacited by 1
12 most cited of 20 All 20 (JSON)
- 2026SalAngaBhava: A Sinhala Market Dataset for Aspect-based Sentiment Analysis6 Jul 2026
- 2026Multi-Modal Spatio-Temporal Graph Neural Network with Mixture of Experts for Soil Organic Carbon Prediction15 Jun 2026
- 2026Mobility-Embedded POIs: Learning What A Place Is and How It Is Used from Human Movement29 Jan 2026
- 2025RelMap: Reliable Spatiotemporal Sensor Data Visualization via Imputative Spatial Interpolation2 Aug 2025
- 2025Urban Incident Prediction with Graph Neural Networks: Integrating Government Ratings and Crowdsourced Reports10 Jun 2025
- 2025On the use of Graphs for Satellite Image Time Series22 May 2025
- 2025Graph ODEs and Beyond: A Comprehensive Survey on Integrating Differential Equations with Graph Neural Networks29 Mar 2025
- 2024Introduction to Graph Neural Networks for Machine Learning Engineers27 Dec 2024
- 2024Beyond Grid Data: Exploring Graph Neural Networks for Earth Observation5 Nov 2024
- 2024Disentangled and Self-Explainable Node Representation Learning28 Oct 2024
- 2024Spatioformer: A Geo-encoded Transformer for Large-Scale Plant Species Richness Prediction25 Oct 2024
- 2024Positional Encoder Graph Quantile Neural Networks for Geographic Data27 Sep 2024
12 newest of 20 All 20 (JSON)