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Multi-Modal Transformer for Accelerated MR Imaging

arXiv 2106.14248 ↗First posted 27 Jun 2021eess.IV cs.CVcited by 42

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Abstract (arXiv)

Accelerated multi-modal magnetic resonance (MR) imaging is a new and effective solution for fast MR imaging, providing superior performance in restoring the target modality from its undersampled counterpart with guidance from an auxiliary modality. However, existing works simply combine the auxiliary modality as prior information, lacking in-depth investigations on the potential mechanisms for fusing different modalities. Further, they usually rely on the convolutional neural networks (CNNs), which is limited by the intrinsic locality in capturing the long-distance dependency. To this end, we propose a multi-modal transformer (MTrans), which is capable of transferring multi-scale features from the target modality to the auxiliary modality, for accelerated MR imaging. To capture deep multi-modal information, our MTrans utilizes an improved multi-head attention mechanism, named cross attention module, which absorbs features from the auxiliary modality that contribute to the target modality. Our framework provides three appealing benefits: (i) Our MTrans use an improved transformers for multi-modal MR imaging, affording more global information compared with existing CNN-based methods. (ii) A new cross attention module is proposed to exploit the useful information in each modality at different scales. The small patch in the target modality aims to keep more fine details, the large patch in the auxiliary modality aims to obtain high-level context features from the larger region and supplement the target modality effectively. (iii) We evaluate MTrans with various accelerated multi-modal MR imaging tasks, e.g., MR image reconstruction and super-resolution, where MTrans outperforms state-of-the-art methods on fastMRI and real-world clinical datasets.

Key facts. Cited by 42 papers in the map (data through 7 Oct 2026). Builds on 37 of its 80 references that are in the map. First posted on arXiv 27 Jun 2021.

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37 of 80 references.

References · 37

  1. 2017Attention Is All You Needcited by 59,932
  2. 2020An Image is Worth 16x16 Words: Transformers for Image Recognition at Scalecited by 29,915
  3. 2020End-to-End Object Detection with Transformerscited by 7,384
  4. 2017Squeeze-and-Excitation Networkscited by 4,763
  5. 2021TransUNet: Transformers Make Strong Encoders for Medical Image Segmentationcited by 1,552
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  8. 2018Residual Dense Network for Image Super-Resolutioncited by 796
  9. 2017The Perception-Distortion Tradeoffcited by 582
  10. 2018fastMRI: An Open Dataset and Benchmarks for Accelerated MRIcited by 464
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25 more
  1. 2017Learning a Variational Network for Reconstruction of Accelerated MRI Datacited by 340
  2. 2021TransBTS: Multimodal Brain Tumor Segmentation Using Transformercited by 265
  3. 2017A Deep Cascade of Convolutional Neural Networks for Dynamic MR Image Reconstructioncited by 231
  4. 2017Image reconstruction by domain transform manifold learningcited by 231
  5. 2020Hi-Net: Hybrid-fusion Network for Multi-modal MR Image Synthesiscited by 86
  6. 2021TransMed: Transformers Advance Multi-modal Medical Image Classificationcited by 85
  7. 2017Compressed Sensing MRI Reconstruction using a Generative Adversarial Network with a Cyclic Losscited by 82
  8. 2021Unsupervised MRI Reconstruction via Zero-Shot Learned Adversarial Transformerscited by 76
  9. 2018HyperDense-Net: A hyper-densely connected CNN for multi-modal image segmentationcited by 66
  10. 2021Task Transformer Network for Joint MRI Reconstruction and Super-Resolutioncited by 58
  11. 2018Deep Residual Learning for Accelerated MRI using Magnitude and Phase Networkscited by 53
  12. 2018Brain MRI Super Resolution Using 3D Deep Densely Connected Neural Networkscited by 46
  13. 2019Multi-Contrast Super-Resolution MRI Through a Progressive Networkcited by 45
  14. 2019GrappaNet: Combining Parallel Imaging with Deep Learning for Multi-Coil MRI Reconstructioncited by 45
  15. 2021Multi-Contrast MRI Super-Resolution via a Multi-Stage Integration Networkcited by 42
  16. 2019Deep Generalization of Structured Low-Rank Algorithms (Deep-SLR)cited by 29
  17. 2019LORAKI: Autocalibrated Recurrent Neural Networks for Autoregressive MRI Reconstruction in k-Spacecited by 27
  18. 2018A Deep Information Sharing Network for Multi-contrast Compressed Sensing MRI Reconstructioncited by 22
  19. 2018Coupled Dictionary Learning for Multi-contrast MRI Reconstructioncited by 16
  20. 2021Dual-Octave Convolution for Accelerated Parallel MR Image Reconstructioncited by 12
  21. 2017Context-Sensitive Super-Resolution for Fast Fetal Magnetic Resonance Imagingcited by 10
  22. 2021DONet: Dual-Octave Network for Fast MR Image Reconstructioncited by 9
  23. 2019Hyper-Pairing Network for Multi-Phase Pancreatic Ductal Adenocarcinoma Segmentationcited by 8
  24. 2019Model-based Convolutional De-Aliasing Network Learning for Parallel MR Imagingcited by 4
  25. 2021Temporal Feature Fusion with Sampling Pattern Optimization for Multi-echo Gradient Echo Acquisition and Image Reconstructioncited by 4

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Cited by year (2026 to 7 Oct)

Citing papers per year: 2021: 2; 2022: 4; 2023: 10; 2024: 9; 2025: 11; 2026: 6.

42 papers.

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  1. 2023Advances in Medical Image Analysis with Vision Transformers: A Comprehensive Reviewcited by 62
  2. 2022ReconFormer: Accelerated MRI Reconstruction Using Recurrent Transformercited by 52
  3. 2023Learning Federated Visual Prompt in Null Space for MRI Reconstructioncited by 40
  4. 2021Specificity-Preserving Federated Learning for MR Image Reconstructioncited by 35
  5. 2023Transformers in Healthcare: A Surveycited by 17
  6. 2024MMR-Mamba: Multi-Modal MRI Reconstruction with Mamba and Spatial-Frequency Information Fusioncited by 15
  7. 2021Exploring Separable Attention for Multi-Contrast MR Image Super-Resolutioncited by 13
  8. 2023Learning Fourier-Constrained Diffusion Bridges for MRI Reconstructioncited by 13
  9. 2022PARCEL: Physics-based Unsupervised Contrastive Representation Learning for Multi-coil MR Imagingcited by 8
  10. 2022Vision Transformers in Medical Imaging: A Reviewcited by 8
  11. 2024Physics-Driven Autoregressive State Space Models for Medical Image Reconstructioncited by 7
  12. 2023Deep Unfolding Convolutional Dictionary Model for Multi-Contrast MRI Super-resolution and Reconstructioncited by 6
30 more
  1. 2025A Trust-Guided Approach to MR Image Reconstruction with Side Informationcited by 6
  2. 2023Spatial and Modal Optimal Transport for Fast Cross-Modal MRI Reconstructioncited by 5
  3. 2023Federated Pseudo Modality Generation for Incomplete Multi-Modal MRI Reconstructioncited by 5
  4. 2022Multi-branch Cascaded Swin Transformers with Attention to k-space Sampling Pattern for Accelerated MRI Reconstructioncited by 4
  5. 2025Generative Autoregressive Transformers for Model-Agnostic Federated MRI Reconstructioncited by 4
  6. 2023Fast MRI Reconstruction via Edge Attentioncited by 3
  7. 2024A Plug-and-Play Method for Guided Multi-contrast MRI Reconstruction based on Content/Style Modelingcited by 2
  8. 2024Accelerated Multi-Contrast MRI Reconstruction via Frequency and Spatial Mutual Learningcited by 2
  9. 2025Hierarchical Deep Feature Fusion and Ensemble Learning for Enhanced Brain Tumor MRI Classificationcited by 2
  10. 2025SSCM: A Spatial-Semantic Consistent Model for Multi-Contrast MRI Super-Resolutioncited by 2
  11. 2023Rethinking Dual-Domain Undersampled MRI reconstruction: domain-specific design from the perspective of the receptive fieldcited by 1
  12. 2024DuDoUniNeXt: Dual-domain unified hybrid model for single and multi-contrast undersampled MRI reconstructioncited by 1
  13. 2024Enhance the Image: Super Resolution using Artificial Intelligence in MRIcited by 1
  14. 2024Continuous K-space Recovery Network with Image Guidance for Fast MRI Reconstructioncited by 1
  15. 2025Re-Visible Dual-Domain Self-Supervised Deep Unfolding Network for MRI Reconstructioncited by 1
  16. 2025A Comprehensive Survey on Magnetic Resonance Image Reconstructioncited by 1
  17. 2023Compound Attention and Neighbor Matching Network for Multi-contrast MRI Super-resolutioncited by 0
  18. 2024The object detection method aids in image reconstruction evaluation and clinical interpretation of meniscal abnormalitiescited by 0
  19. 2024Untrained Perceptual Loss for image denoising of line-like structures in MR imagescited by 0
  20. 2025Decoupling Multi-Contrast Super-Resolution: Self-Supervised Implicit Re-Representation for Unpaired Cross-Modal Synthesiscited by 0
  21. 2025Multi-Plane Vision Transformer for Hemorrhage Classification Using Axial and Sagittal MRI Datacited by 0
  22. 2025Adaptive Gate-Aware Mamba Networks for Magnetic Resonance Fingerprintingcited by 0
  23. 2025CD-DPE: Dual-Prompt Expert Network Based on Convolutional Dictionary Feature Decoupling for Multi-Contrast MRI Super-Resolutioncited by 0
  24. 2025UniFS: Unified Multi-Contrast MRI Reconstruction via Frequency-Spatial Fusioncited by 0
  25. 2026Frequency Error-Guided Under-sampling Optimization for Multi-Contrast MRI Reconstructioncited by 0
  26. 2026Learning Emergent Modular Representations in Multi-modality Medical Vision Foundation Modelscited by 0
  27. 2026L-TGVN: Leveraging Longitudinal Priors for Personalized Rapid MRIcited by 0
  28. 2026Variational Network with Wavelet-based UNET in Accelerated MRI Reconstruction from Under Sampled K-space Datacited by 0
  29. 2026SHFormer: Dynamic Spectral Filtering Convolutional Neural Network and High-pass Kernel Generation Transformer for Adaptive MRI Reconstructioncited by 0
  30. 2026MIAR: Medical Image Super-Resolution With Autoregressive Modelingcited by 0