MMR-Mamba: Multi-Modal MRI Reconstruction with Mamba and Spatial-Frequency Information Fusion
On the map: State-space sequence models (S4, Mamba) → Mamba for medical image analysis
Abstract (arXiv)
Multi-modal MRI offers valuable complementary information for diagnosis and treatment; however, its utility is limited by prolonged scanning times. To accelerate the acquisition process, a practical approach is to reconstruct images of the target modality, which requires longer scanning times, from under-sampled k-space data using the fully-sampled reference modality with shorter scanning times as guidance. The primary challenge of this task is comprehensively and efficiently integrating complementary information from different modalities to achieve high-quality reconstruction. Existing methods struggle with this: 1) convolution-based models fail to capture long-range dependencies; 2) transformer-based models, while excelling in global feature modeling, struggle with quadratic computational complexity. To address this, we propose MMR-Mamba, a novel framework that thoroughly and efficiently integrates multi-modal features for MRI reconstruction, leveraging Mamba's capability to capture long-range dependencies with linear computational complexity while exploiting global properties of the Fourier domain. Specifically, we first design a Target modality-guided Cross Mamba (TCM) module in the spatial domain, which maximally restores the target modality information by selectively incorporating relevant information from the reference modality. Then, we introduce a Selective Frequency Fusion (SFF) module to efficiently integrate global information in the Fourier domain and recover high-frequency signals for the reconstruction of structural details. Furthermore, we devise an Adaptive Spatial-Frequency Fusion (ASFF) module, which mutually enhances the spatial and frequency domains by supplementing less informative channels from one domain with corresponding channels from the other.
Key facts. Cited by 15 papers in the map (data through 7 Oct 2026). Placed in Mamba for medical image analysis, one of 10 directions in State-space sequence models (S4, Mamba). Builds on 37 of its 63 references that are in the map. First posted on arXiv 27 Jun 2024.
Builds on
37 of 63 references.
Closest ancestors · 4
Same direction, newest first
- 2024MedMamba: Vision Mamba for Medical Image Classification6 Mar
- 2024MambaMIR: An Arbitrary-Masked Mamba for Joint Medical Image Reconstruction and Uncertainty Estimation28 Feb
- 2024SegMamba: Long-range Sequential Modeling Mamba For 3D Medical Image Segmentation24 Jan
- 2024U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation9 Jan
Other references · 33
- 2020An Image is Worth 16x16 Words: Transformers for Image Recognition at Scalecited by 29,915
- 2023Mamba: Linear-Time Sequence Modeling with Selective State Spacescited by 4,616
- 2021Efficiently Modeling Long Sequences with Structured State Spacescited by 2,424
- 2020Fourier Features Let Networks Learn High Frequency Functions in Low Dimensional Domainscited by 2,170
- 2021SwinIR: Image Restoration Using Swin Transformercited by 1,869
- 2024Vision Mamba: Efficient Visual Representation Learning with Bidirectional State Space Modelcited by 1,051
- 2024VMamba: Visual State Space Modelcited by 955
- 2017Learning Efficient Convolutional Networks through Network Slimmingcited by 673
- 2020HiPPO: Recurrent Memory with Optimal Polynomial Projectionscited by 600
- 2017Understanding the Effective Receptive Field in Deep Convolutional Neural Networkscited by 549
- 2020FDA: Fourier Domain Adaptation for Semantic Segmentationcited by 540
- 2022Diagonal State Spaces are as Effective as Structured State Spacescited by 350
21 more
- 2024MambaIR: A Simple Baseline for Image Restoration with State-Space Modelcited by 349
- 2021A Fourier-based Framework for Domain Generalizationcited by 287
- 2021FedDG: Federated Domain Generalization on Medical Image Segmentation via Episodic Learning in Continuous Frequency Spacecited by 284
- 2022Liquid Structural State-Space Modelscited by 134
- 2022How to Train Your HiPPO: State Space Models with Generalized Orthogonal Basis Projectionscited by 121
- 2018Rethinking the Smaller-Norm-Less-Informative Assumption in Channel Pruning of Convolution Layerscited by 112
- 2024Pan-Mamba: Effective pan-sharpening with State Space Modelcited by 73
- 2020DuDoRNet: Learning a Dual-Domain Recurrent Network for Fast MRI Reconstruction with Deep T1 Priorcited by 72
- 2022ReconFormer: Accelerated MRI Reconstruction Using Recurrent Transformercited by 52
- 2019Multi-Contrast Super-Resolution MRI Through a Progressive Networkcited by 45
- 2023Toeplitz Neural Network for Sequence Modelingcited by 43
- 2021Multi-Contrast MRI Super-Resolution via a Multi-Stage Integration Networkcited by 42
- 2021Multi-Modal Transformer for Accelerated MR Imagingcited by 42
- 2022DSFormer: A Dual-domain Self-supervised Transformer for Accelerated Multi-contrast MRI Reconstructioncited by 30
- 2022Transformer-empowered Multi-scale Contextual Matching and Aggregation for Multi-contrast MRI Super-resolutioncited by 30
- 2018A Deep Information Sharing Network for Multi-contrast Compressed Sensing MRI Reconstructioncited by 22
- 2021Multi-Modal MRI Reconstruction Assisted with Spatial Alignment Networkcited by 16
- 2024CMViM: Contrastive Masked Vim Autoencoder for 3D Multi-modal Representation Learning for AD classificationcited by 15
- 2021Exploring Separable Attention for Multi-Contrast MR Image Super-Resolutioncited by 13
- 2023Learning Fourier-Constrained Diffusion Bridges for MRI Reconstructioncited by 13
- 2023Image Reconstruction for Accelerated MR Scan with Faster Fourier Convolutional Neural Networkscited by 2
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Citing papers per year: 2024: 2; 2025: 9; 2026: 4.
15 papers.
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- 2024Mamba in Vision: A Comprehensive Survey of Techniques and Applicationscited by 18
- 2025BRISC: Annotated Dataset for Brain Tumor Segmentation and Classificationcited by 14
- 2024Physics-Driven Autoregressive State Space Models for Medical Image Reconstructioncited by 7
- 2025DH-Mamba: Exploring Dual-domain Hierarchical State Space Models for MRI Reconstructioncited by 3
- 2025A Comprehensive Survey on Magnetic Resonance Image Reconstructioncited by 1
- 2025From Coarse to Continuous: Progressive Refinement Implicit Neural Representation for Motion-Robust Anisotropic MRI Reconstructioncited by 1
- 2025Efficient Vision Mamba for MRI Super-Resolution via Hybrid Selective Scanningcited by 1
- 2026M3SR: Multi-Scale Multi-Perceptual Mamba for Efficient Spectral Reconstructioncited by 1
- 2025Johnson-Lindenstrauss Lemma Guided Network for Efficient 3D Medical Segmentationcited by 0
- 2025FDP: A Frequency-Decomposition Preprocessing Pipeline for Unsupervised Anomaly Detection in Brain MRIcited by 0
- 2025FLAT: FLow-Aligned Training of Unrolled Networks for MRI Reconstructioncited by 0
- 2025Mamba-Based Modality Disentanglement Network for Multi-Contrast MRI Reconstructioncited by 0
3 more
- 2026Frequency Error-Guided Under-sampling Optimization for Multi-Contrast MRI Reconstructioncited by 0
- 2026PAS-Mamba: Phase-Amplitude-Spatial State Space Model for MRI Reconstructioncited by 0
- 2026Revisiting Global Token Mixing in Task-Dependent MRI Restoration: Insights from Minimal Gated CNN Baselinescited by 0
- 2026Revisiting Global Token Mixing in Task-Dependent MRI Restoration: Insights from Minimal Gated CNN Baselines2 Mar 2026
- 2026PAS-Mamba: Phase-Amplitude-Spatial State Space Model for MRI Reconstruction20 Jan 2026
- 2026Frequency Error-Guided Under-sampling Optimization for Multi-Contrast MRI Reconstruction14 Jan 2026
- 2026M3SR: Multi-Scale Multi-Perceptual Mamba for Efficient Spectral Reconstruction13 Jan 2026
- 2025Efficient Vision Mamba for MRI Super-Resolution via Hybrid Selective Scanning22 Dec 2025
- 2025Mamba-Based Modality Disentanglement Network for Multi-Contrast MRI Reconstruction22 Dec 2025
- 2025FLAT: FLow-Aligned Training of Unrolled Networks for MRI Reconstruction2 Dec 2025
- 2025FDP: A Frequency-Decomposition Preprocessing Pipeline for Unsupervised Anomaly Detection in Brain MRI17 Nov 2025
- 2025Johnson-Lindenstrauss Lemma Guided Network for Efficient 3D Medical Segmentation26 Sep 2025
- 2025From Coarse to Continuous: Progressive Refinement Implicit Neural Representation for Motion-Robust Anisotropic MRI Reconstruction19 Jun 2025
- 2025BRISC: Annotated Dataset for Brain Tumor Segmentation and Classification17 Jun 2025
- 2025A Comprehensive Survey on Magnetic Resonance Image Reconstruction10 Mar 2025
- 2024Mamba in Vision: A Comprehensive Survey of Techniques and Applicationscited by 18
- 2025DH-Mamba: Exploring Dual-domain Hierarchical State Space Models for MRI Reconstructioncited by 3
- 2025Efficient Vision Mamba for MRI Super-Resolution via Hybrid Selective Scanningcited by 1
- 2026M3SR: Multi-Scale Multi-Perceptual Mamba for Efficient Spectral Reconstructioncited by 1
- 2025Mamba-Based Modality Disentanglement Network for Multi-Contrast MRI Reconstructioncited by 0
- 2026PAS-Mamba: Phase-Amplitude-Spatial State Space Model for MRI Reconstructioncited by 0
- 2026PAS-Mamba: Phase-Amplitude-Spatial State Space Model for MRI Reconstruction20 Jan 2026
- 2026M3SR: Multi-Scale Multi-Perceptual Mamba for Efficient Spectral Reconstruction13 Jan 2026
- 2025Efficient Vision Mamba for MRI Super-Resolution via Hybrid Selective Scanning22 Dec 2025
- 2025Mamba-Based Modality Disentanglement Network for Multi-Contrast MRI Reconstruction22 Dec 2025
- 2025DH-Mamba: Exploring Dual-domain Hierarchical State Space Models for MRI Reconstruction14 Jan 2025
- 2024Mamba in Vision: A Comprehensive Survey of Techniques and Applications4 Oct 2024
- 2025BRISC: Annotated Dataset for Brain Tumor Segmentation and Classificationcited by 14
- 2024Physics-Driven Autoregressive State Space Models for Medical Image Reconstructioncited by 7
- 2025A Comprehensive Survey on Magnetic Resonance Image Reconstructioncited by 1
- 2025From Coarse to Continuous: Progressive Refinement Implicit Neural Representation for Motion-Robust Anisotropic MRI Reconstructioncited by 1
- 2025Johnson-Lindenstrauss Lemma Guided Network for Efficient 3D Medical Segmentationcited by 0
- 2025FDP: A Frequency-Decomposition Preprocessing Pipeline for Unsupervised Anomaly Detection in Brain MRIcited by 0
- 2026Frequency Error-Guided Under-sampling Optimization for Multi-Contrast MRI Reconstructioncited by 0
- 2026Revisiting Global Token Mixing in Task-Dependent MRI Restoration: Insights from Minimal Gated CNN Baselinescited by 0
- 2026Revisiting Global Token Mixing in Task-Dependent MRI Restoration: Insights from Minimal Gated CNN Baselines2 Mar 2026
- 2026Frequency Error-Guided Under-sampling Optimization for Multi-Contrast MRI Reconstruction14 Jan 2026
- 2025FDP: A Frequency-Decomposition Preprocessing Pipeline for Unsupervised Anomaly Detection in Brain MRI17 Nov 2025
- 2025Johnson-Lindenstrauss Lemma Guided Network for Efficient 3D Medical Segmentation26 Sep 2025
- 2025From Coarse to Continuous: Progressive Refinement Implicit Neural Representation for Motion-Robust Anisotropic MRI Reconstruction19 Jun 2025
- 2025BRISC: Annotated Dataset for Brain Tumor Segmentation and Classification17 Jun 2025
- 2025A Comprehensive Survey on Magnetic Resonance Image Reconstruction10 Mar 2025
- 2024Physics-Driven Autoregressive State Space Models for Medical Image Reconstruction12 Dec 2024
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- 2024MambaDFuse: A Mamba-based Dual-phase Model for Multi-modality Image Fusion
- 2025FaRMamba: Frequency-based learning and Reconstruction aided Mamba for Medical Segmentation
- 2026Interactive Spatial-Frequency Fusion Mamba for Multi-Modal Image Fusion
- 2024A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration and Beyond