Advancing biological super-resolution microscopy through deep learning: a brief review
Not on the map. Why?
Abstract (arXiv)
Super-resolution microscopy overcomes the diffraction limit of conventional light microscopy in spatial resolution. By providing novel spatial or spatio-temporal information on biological processes at nanometer resolution with molecular specificity, it plays an increasingly important role in life sciences. However, its technical limitations require trade-offs to balance its spatial resolution, temporal resolution, and light exposure of samples. Recently, deep learning has achieved breakthrough performance in many image processing and computer vision tasks. It has also shown great promise in pushing the performance envelope of super-resolution microscopy. In this brief Review, we survey recent advances in using deep learning to enhance performance of super-resolution microscopy. We focus primarily on how deep learning ad-vances reconstruction of super-resolution images. Related key technical challenges are discussed. Despite the challenges, deep learning is set to play an indispensable and transformative role in the development of super-resolution microscopy. We conclude with an outlook on how deep learning could shape the future of this new generation of light microscopy technology.
Key facts. Cited by 2 papers in the map (data through 7 Oct 2026). Builds on 49 of its 128 references that are in the map. First posted on arXiv 24 Jun 2021.
Builds on
49 of 128 references.
References · 49
- 2015Deep Residual Learning for Image Recognitioncited by 51,809
- 2020Language Models are Few-Shot Learnerscited by 32,199
- 2015U-Net: Convolutional Networks for Biomedical Image Segmentationcited by 19,604
- 2014Very Deep Convolutional Networks for Large-Scale Image Recognitioncited by 15,267
- 2021Swin Transformer: Hierarchical Vision Transformer using Shifted Windowscited by 12,082
- 2015Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networkscited by 9,617
- 2014ImageNet Large Scale Visual Recognition Challengecited by 8,441
- 2017Mask R-CNNcited by 7,259
- 2014Fully Convolutional Networks for Semantic Segmentationcited by 4,845
- 2015You Only Look Once: Unified, Real-Time Object Detectioncited by 4,829
- 2014Going Deeper with Convolutionscited by 4,231
- 2015SSD: Single Shot MultiBox Detectorcited by 3,125
37 more
- 2015Fast R-CNNcited by 2,930
- 2019A Comprehensive Survey on Graph Neural Networkscited by 2,906
- 2016Pyramid Scene Parsing Networkcited by 2,472
- 2019HuggingFace's Transformers: State-of-the-art Natural Language Processingcited by 2,201
- 2013Rich feature hierarchies for accurate object detection and semantic segmentationcited by 2,160
- 2018Graph Neural Networks: A Review of Methods and Applicationscited by 1,571
- 2017Enhanced Deep Residual Networks for Single Image Super-Resolutioncited by 1,543
- 2015SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentationcited by 1,483
- 2019Deep High-Resolution Representation Learning for Visual Recognitioncited by 1,417
- 2014Image Super-Resolution Using Deep Convolutional Networkscited by 1,218
- 2021Transformers in Vision: A Surveycited by 1,009
- 2019Big Transfer (BiT): General Visual Representation Learningcited by 766
- 2018CornerNet: Detecting Objects as Paired Keypointscited by 763
- 2018Object Detection with Deep Learning: A Reviewcited by 524
- 2016R-FCN: Object Detection via Region-based Fully Convolutional Networkscited by 414
- 2018Deep Learning for Generic Object Detection: A Surveycited by 392
- 2019Deep Learning for Image Super-resolution: A Surveycited by 368
- 2017The Expressive Power of Neural Networks: A View from the Widthcited by 318
- 2017A Survey of Model Compression and Acceleration for Deep Neural Networkscited by 298
- 2020A survey of loss functions for semantic segmentationcited by 216
- 2020On Hyperparameter Optimization of Machine Learning Algorithms: Theory and Practicecited by 181
- 2018Deep Learning for Single Image Super-Resolution: A Brief Reviewcited by 158
- 2018Visual Interpretability for Deep Learning: a Surveycited by 155
- 2019Deep Learning on Image Denoising: An overviewcited by 128
- 2019Deep Learning in Medical Image Registration: A Surveycited by 124
- 2017A Review on Deep Learning Techniques Applied to Semantic Segmentationcited by 122
- 2020Hyper-Parameter Optimization: A Review of Algorithms and Applicationscited by 114
- 2019Deep Learning in Video Multi-Object Tracking: A Surveycited by 107
- 2019Deep Learning in Medical Image Registration: A Reviewcited by 98
- 2019A Deep Journey into Super-resolution: A surveycited by 86
- 2017A Review of Convolutional Neural Networks for Inverse Problems in Imagingcited by 81
- 2018A Poisson-Gaussian Denoising Dataset with Real Fluorescence Microscopy Imagescited by 70
- 2019Optimization for deep learning: theory and algorithmscited by 70
- 2020A survey on Semi-, Self- and Unsupervised Learning for Image Classificationcited by 55
- 2020Recent advances in deep learning theorycited by 41
- 2019Generative Adversarial Networks in Computer Vision: A Survey and Taxonomycited by 12
- 2019Three-dimensional virtual refocusing of fluorescence microscopy images using deep learningcited by 11
Built on by
Citing papers per year: 2023: 1; 2024: 1.
2 papers.