Visualizing Graph Neural Networks with CorGIE: Corresponding a Graph to Its Embedding
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Abstract (arXiv)
Graph neural networks (GNNs) are a class of powerful machine learning tools that model node relations for making predictions of nodes or links. GNN developers rely on quantitative metrics of the predictions to evaluate a GNN, but similar to many other neural networks, it is difficult for them to understand if the GNN truly learns characteristics of a graph as expected. We propose an approach to corresponding an input graph to its node embedding (aka latent space), a common component of GNNs that is later used for prediction. We abstract the data and tasks, and develop an interactive multi-view interface called CorGIE to instantiate the abstraction. As the key function in CorGIE, we propose the K-hop graph layout to show topological neighbors in hops and their clustering structure. To evaluate the functionality and usability of CorGIE, we present how to use CorGIE in two usage scenarios, and conduct a case study with five GNN experts.
Key facts. Cited by 8 papers in the map (data through 7 Oct 2026). Builds on 18 of its 47 references that are in the map. First posted on arXiv 24 Jun 2021.
Builds on
18 of 47 references.
References · 18
- 2016Semi-Supervised Classification with Graph Convolutional Networkscited by 11,282
- 2017Graph Attention Networkscited by 8,854
- 2018UMAP: Uniform Manifold Approximation and Projection for Dimension Reductioncited by 2,841
- 2020Open Graph Benchmark: Datasets for Machine Learning on Graphscited by 2,148
- 2019GNNExplainer: Generating Explanations for Graph Neural Networkscited by 735
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- 2015LINE: Large-scale Information Network Embeddingcited by 582
- 2020Explainability in Graph Neural Networks: A Taxonomic Surveycited by 383
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6 more
- 2017Cross-Sentence N-ary Relation Extraction with Graph LSTMscited by 101
- 2016Embedding Projector: Interactive Visualization and Interpretation of Embeddingscited by 43
- 2018EmbeddingVis: A Visual Analytics Approach to Comparative Network Embedding Inspectioncited by 18
- 2017DimReader: Axis lines that explain non-linear projectionscited by 17
- 2019embComp: Visual Interactive Comparison of Vector Embeddingscited by 15
- 2019The State of the Art in Multilayer Network Visualizationcited by 3
Built on by
Citing papers per year: 2023: 1; 2024: 5; 2025: 1; 2026: 1.
8 papers.
- 2023Visual Analytics For Machine Learning: A Data Perspective Surveycited by 25
- 2024EL-VIT: Probing Vision Transformer with Interactive Visualizationcited by 3
- 2024Global Concept Explanations for Graphs by Contrastive Learningcited by 2
- 2024Design Requirements for Human-Centered Graph Neural Network Explanationscited by 0
- 2024GNNAnatomy: Rethinking Model-Level Explanations for Graph Neural Networkscited by 0
- 2024OLGA: One-cLass Graph Autoencodercited by 0
- 2025InteractiveGNNExplainer: A Visual Analytics Framework for Multi-Faceted Understanding and Probing of Graph Neural Network Predictionscited by 0
- 2026LatentFlow: Visual Analytics for Latent Space Analysis in Molecular Graph Neural Networkscited by 0
- 2026LatentFlow: Visual Analytics for Latent Space Analysis in Molecular Graph Neural Networks24 Jul 2026
- 2025InteractiveGNNExplainer: A Visual Analytics Framework for Multi-Faceted Understanding and Probing of Graph Neural Network Predictions17 Nov 2025
- 2024OLGA: One-cLass Graph Autoencoder13 Jun 2024
- 2024GNNAnatomy: Rethinking Model-Level Explanations for Graph Neural Networks6 Jun 2024
- 2024Design Requirements for Human-Centered Graph Neural Network Explanations11 May 2024
- 2024Global Concept Explanations for Graphs by Contrastive Learning25 Apr 2024
- 2024EL-VIT: Probing Vision Transformer with Interactive Visualization23 Jan 2024
- 2023Visual Analytics For Machine Learning: A Data Perspective Survey15 Jul 2023