Interpretable Unsupervised Diversity Denoising and Artefact Removal
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Abstract (arXiv)
Image denoising and artefact removal are complex inverse problems admitting multiple valid solutions. Unsupervised diversity restoration, that is, obtaining a diverse set of possible restorations given a corrupted image, is important for ambiguity removal in many applications such as microscopy where paired data for supervised training are often unobtainable. In real world applications, imaging noise and artefacts are typically hard to model, leading to unsatisfactory performance of existing unsupervised approaches. This work presents an interpretable approach for unsupervised and diverse image restoration. To this end, we introduce a capable architecture called Hierarchical DivNoising (HDN) based on hierarchical Variational Autoencoder. We show that HDN learns an interpretable multi-scale representation of artefacts and we leverage this interpretability to remove imaging artefacts commonly occurring in microscopy data. Our method achieves state-of-the-art results on twelve benchmark image denoising datasets while providing access to a whole distribution of sensibly restored solutions. Additionally, we demonstrate on three real microscopy datasets that HDN removes artefacts without supervision, being the first method capable of doing so while generating multiple plausible restorations all consistent with the given corrupted image.
Key facts. Cited by 26 papers in the map (data through 7 Oct 2026). Builds on 34 of its 55 references that are in the map. First posted on arXiv 3 Apr 2021.
Builds on
34 of 55 references.
References · 34
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22 more
- 2017PixelCNN++: Improving the PixelCNN with Discretized Logistic Mixture Likelihood and Other Modificationscited by 415
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- 2018Noise2Void - Learning Denoising from Single Noisy Imagescited by 359
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- 2016Variational Lossy Autoencodercited by 175
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- 2020Projected Distribution Loss for Image Enhancementcited by 29
- 2020DenoiSeg: Joint Denoising and Segmentationcited by 20
- 2017Isotropic reconstruction of 3D fluorescence microscopy images using convolutional neural networkscited by 17
- 2019Fully Unsupervised Probabilistic Noise2Voidcited by 14
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- 2020Improving Blind Spot Denoising for Microscopycited by 7
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Citing papers per year: 2022: 5; 2023: 9; 2024: 3; 2025: 6; 2026: 3.
26 papers.
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- 2023SPIRE: Semantic Prompt-Driven Image Restorationcited by 24
- 2023Score Priors Guided Deep Variational Inference for Unsupervised Real-World Single Image Denoisingcited by 15
- 2024MicroSSIM: Improved Structural Similarity for Comparing Microscopy Datacited by 10
- 2022N2V2 -- Fixing Noise2Void Checkerboard Artifacts with Modified Sampling Strategies and a Tweaked Network Architecturecited by 7
- 2023Inverse problem regularization with hierarchical variational autoencoderscited by 6
- 2022Patch-Craft Self-Supervised Training for Correlated Image Denoisingcited by 5
- 2022μSplit: efficient image decomposition for microscopy datacited by 5
- 2026Self-Supervised Learning from Noisy and Incomplete Datacited by 5
- 2022Evaluating Unsupervised Denoising Requires Unsupervised Metricscited by 3
- 2023Image Denoising and the Generative Accumulation of Photonscited by 3
- 2023Learned, uncertainty-driven adaptive acquisition for photon-efficient scanning microscopycited by 3
- 2024denoiSplit: a method for joint microscopy image splitting and unsupervised denoisingcited by 3
14 more
- 2025HazeMatching: Dehazing Light Microscopy Images with Guided Conditional Flow Matchingcited by 3
- 2022MMV_Im2Im: An Open Source Microscopy Machine Vision Toolbox for Image-to-Image Transformationcited by 2
- 2023Unsupervised Denoising for Signal-Dependent and Row-Correlated Imaging Noisecited by 1
- 2025scSplit: Bringing Severity Cognizance to Image Decomposition in Fluorescence Microscopycited by 1
- 2025Filter2Noise: A Framework for Interpretable and Zero-Shot Low-Dose CT Image Denoisingcited by 1
- 2025ResMatching: Noise-Resilient Computational Super-Resolution via Guided Conditional Flow Matchingcited by 1
- 2026λSplit: Self-Supervised Content-Aware Spectral Unmixing for Fluorescence Microscopycited by 1
- 2023Shot Noise Reduction in Radiographic and Tomographic Multi-Channel Imaging with Self-Supervised Deep Learningcited by 0
- 2023DeepContrast: Deep Tissue Contrast Enhancement using Synthetic Data Degradations and OOD Model Predictionscited by 0
- 2023Direct Unsupervised Denoisingcited by 0
- 2024Diffusion Priors for Variational Likelihood Estimation and Image Denoisingcited by 0
- 2025Hybrid Swin Attention Networks for Simultaneously Low-Dose PET and CT Denoisingcited by 0
- 2025ε-Seg: Sparsely Supervised Semantic Segmentation of Microscopy Datacited by 0
- 2026SWITi: Quantifying and Reducing Tiling Artifacts with Sliding Window Inner Tilingcited by 0
- 2026SWITi: Quantifying and Reducing Tiling Artifacts with Sliding Window Inner Tiling21 Jul 2026
- 2026λSplit: Self-Supervised Content-Aware Spectral Unmixing for Fluorescence Microscopy24 Mar 2026
- 2026Self-Supervised Learning from Noisy and Incomplete Data6 Jan 2026
- 2025ResMatching: Noise-Resilient Computational Super-Resolution via Guided Conditional Flow Matching30 Oct 2025
- 2025ε-Seg: Sparsely Supervised Semantic Segmentation of Microscopy Data21 Oct 2025
- 2025Hybrid Swin Attention Networks for Simultaneously Low-Dose PET and CT Denoising8 Sep 2025
- 2025HazeMatching: Dehazing Light Microscopy Images with Guided Conditional Flow Matching27 Jun 2025
- 2025Filter2Noise: A Framework for Interpretable and Zero-Shot Low-Dose CT Image Denoising18 Apr 2025
- 2025scSplit: Bringing Severity Cognizance to Image Decomposition in Fluorescence Microscopy29 Mar 2025
- 2024Diffusion Priors for Variational Likelihood Estimation and Image Denoising23 Oct 2024
- 2024MicroSSIM: Improved Structural Similarity for Comparing Microscopy Data16 Aug 2024
- 2024denoiSplit: a method for joint microscopy image splitting and unsupervised denoising18 Mar 2024
14 more
- 2023SPIRE: Semantic Prompt-Driven Image Restoration18 Dec 2023
- 2023Direct Unsupervised Denoising27 Oct 2023
- 2023Learned, uncertainty-driven adaptive acquisition for photon-efficient scanning microscopy24 Oct 2023
- 2023Unsupervised Denoising for Signal-Dependent and Row-Correlated Imaging Noise11 Oct 2023
- 2023DeepContrast: Deep Tissue Contrast Enhancement using Synthetic Data Degradations and OOD Model Predictions16 Aug 2023
- 2023Score Priors Guided Deep Variational Inference for Unsupervised Real-World Single Image Denoising9 Aug 2023
- 2023Image Denoising and the Generative Accumulation of Photons13 Jul 2023
- 2023Shot Noise Reduction in Radiographic and Tomographic Multi-Channel Imaging with Self-Supervised Deep Learning25 Mar 2023
- 2023Inverse problem regularization with hierarchical variational autoencoders20 Mar 2023
- 2022μSplit: efficient image decomposition for microscopy data23 Nov 2022
- 2022Patch-Craft Self-Supervised Training for Correlated Image Denoising17 Nov 2022
- 2022N2V2 -- Fixing Noise2Void Checkerboard Artifacts with Modified Sampling Strategies and a Tweaked Network Architecture15 Nov 2022
- 2022Evaluating Unsupervised Denoising Requires Unsupervised Metrics11 Oct 2022
- 2022MMV_Im2Im: An Open Source Microscopy Machine Vision Toolbox for Image-to-Image Transformation6 Sep 2022
- 2023SPIRE: Semantic Prompt-Driven Image Restorationcited by 24
- 2025HazeMatching: Dehazing Light Microscopy Images with Guided Conditional Flow Matchingcited by 3
- 2025ResMatching: Noise-Resilient Computational Super-Resolution via Guided Conditional Flow Matchingcited by 1
- 2024Diffusion Priors for Variational Likelihood Estimation and Image Denoisingcited by 0
- 2025ResMatching: Noise-Resilient Computational Super-Resolution via Guided Conditional Flow Matching30 Oct 2025
- 2025HazeMatching: Dehazing Light Microscopy Images with Guided Conditional Flow Matching27 Jun 2025
- 2024Diffusion Priors for Variational Likelihood Estimation and Image Denoising23 Oct 2024
- 2023SPIRE: Semantic Prompt-Driven Image Restoration18 Dec 2023
- 2023Score Priors Guided Deep Variational Inference for Unsupervised Real-World Single Image Denoisingcited by 15
- 2024MicroSSIM: Improved Structural Similarity for Comparing Microscopy Datacited by 10
- 2022N2V2 -- Fixing Noise2Void Checkerboard Artifacts with Modified Sampling Strategies and a Tweaked Network Architecturecited by 7
- 2023Inverse problem regularization with hierarchical variational autoencoderscited by 6
- 2022Patch-Craft Self-Supervised Training for Correlated Image Denoisingcited by 5
- 2022μSplit: efficient image decomposition for microscopy datacited by 5
- 2026Self-Supervised Learning from Noisy and Incomplete Datacited by 5
- 2022Evaluating Unsupervised Denoising Requires Unsupervised Metricscited by 3
- 2023Image Denoising and the Generative Accumulation of Photonscited by 3
- 2023Learned, uncertainty-driven adaptive acquisition for photon-efficient scanning microscopycited by 3
- 2024denoiSplit: a method for joint microscopy image splitting and unsupervised denoisingcited by 3
- 2022MMV_Im2Im: An Open Source Microscopy Machine Vision Toolbox for Image-to-Image Transformationcited by 2
12 most cited of 22 All 22 (JSON)
- 2026SWITi: Quantifying and Reducing Tiling Artifacts with Sliding Window Inner Tiling21 Jul 2026
- 2026λSplit: Self-Supervised Content-Aware Spectral Unmixing for Fluorescence Microscopy24 Mar 2026
- 2026Self-Supervised Learning from Noisy and Incomplete Data6 Jan 2026
- 2025ε-Seg: Sparsely Supervised Semantic Segmentation of Microscopy Data21 Oct 2025
- 2025Hybrid Swin Attention Networks for Simultaneously Low-Dose PET and CT Denoising8 Sep 2025
- 2025Filter2Noise: A Framework for Interpretable and Zero-Shot Low-Dose CT Image Denoising18 Apr 2025
- 2025scSplit: Bringing Severity Cognizance to Image Decomposition in Fluorescence Microscopy29 Mar 2025
- 2024MicroSSIM: Improved Structural Similarity for Comparing Microscopy Data16 Aug 2024
- 2024denoiSplit: a method for joint microscopy image splitting and unsupervised denoising18 Mar 2024
- 2023Direct Unsupervised Denoising27 Oct 2023
- 2023Learned, uncertainty-driven adaptive acquisition for photon-efficient scanning microscopy24 Oct 2023
- 2023Unsupervised Denoising for Signal-Dependent and Row-Correlated Imaging Noise11 Oct 2023
12 newest of 22 All 22 (JSON)