Automatic Brain Tumor Segmentation using Convolutional Neural Networks with Test-Time Augmentation
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Abstract (arXiv)
Automatic brain tumor segmentation plays an important role for diagnosis, surgical planning and treatment assessment of brain tumors. Deep convolutional neural networks (CNNs) have been widely used for this task. Due to the relatively small data set for training, data augmentation at training time has been commonly used for better performance of CNNs. Recent works also demonstrated the usefulness of using augmentation at test time, in addition to training time, for achieving more robust predictions. We investigate how test-time augmentation can improve CNNs' performance for brain tumor segmentation. We used different underpinning network structures and augmented the image by 3D rotation, flipping, scaling and adding random noise at both training and test time. Experiments with BraTS 2018 training and validation set show that test-time augmentation helps to improve the brain tumor segmentation accuracy and obtain uncertainty estimation of the segmentation results.
Key facts. Cited by 36 papers in the map (data through 7 Oct 2026). First posted on arXiv 18 Oct 2018.
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Citing papers per year: 2021: 4; 2022: 5; 2023: 14; 2024: 9; 2025: 3; 2026: 1.
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- 2021A Survey of Uncertainty in Deep Neural Networkscited by 675
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- 2024A Review of Bayesian Uncertainty Quantification in Deep Probabilistic Image Segmentation25 Nov 2024
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- 2024TTA-OOD: Test-time Augmentation for Improving Out-of-Distribution Detection in Gastrointestinal Vision19 Jul 2024
- 2024BayTTA: Uncertainty-aware medical image classification with optimized test-time augmentation using Bayesian model averaging25 Jun 2024
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- 2024Uncertainty-aware Medical Diagnostic Phrase Identification and Grounding10 Apr 2024
- 2024Understanding Test-Time Augmentation10 Feb 2024
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- 2023HAct: Out-of-Distribution Detection with Neural Net Activation Histograms9 Sep 2023
- 2023Uncertainty Aware Training to Improve Deep Learning Model Calibration for Classification of Cardiac MR Images29 Aug 2023
- 2023Robust Uncertainty Quantification Using Conformalised Monte Carlo Prediction18 Aug 2023
- 2023Uncertainty Quantification for Image-based Traffic Prediction across Cities11 Aug 2023
- 2023A hybrid approach for improving U-Net variants in medical image segmentation31 Jul 2023
- 2023Prototype-Driven and Multi-Expert Integrated Multi-Modal MR Brain Tumor Image Segmentation22 Jul 2023
- 2023A Novel SLCA-UNet Architecture for Automatic MRI Brain Tumor Segmentation16 Jul 2023
- 2023SwinFSR: Stereo Image Super-Resolution using SwinIR and Frequency Domain Knowledge25 Apr 2023
- 2023Uncertainty-Aware AB3DMOT by Variational 3D Object Detection12 Feb 2023
- 2023Variational Voxel Pseudo Image Tracking12 Feb 2023
- 2023Generalized Uncertainty of Deep Neural Networks: Taxonomy and Applications2 Feb 2023
- 2023Uncertainty-Aware Distillation for Semi-Supervised Few-Shot Class-Incremental Learning24 Jan 2023
- 2023Towards Reliable Medical Image Segmentation by Modeling Evidential Calibrated Uncertainty1 Jan 2023
- 2022Learning from partially labeled data for multi-organ and tumor segmentation13 Nov 2022
- 2022Disentangled Uncertainty and Out of Distribution Detection in Medical Generative Models11 Nov 2022
- 2022Quantifying U-Net Uncertainty in Multi-Parametric MRI-based Glioma Segmentation by Spherical Image Projection12 Oct 2022
- 2022Brain MRI study for glioma segmentation using convolutional neural networks and original post-processing techniques with low computational demand15 Jul 2022
- 2022SoftDropConnect (SDC) -- Effective and Efficient Quantification of the Network Uncertainty in Deep MR Image Analysis20 Jan 2022
- 2021A Survey of Uncertainty in Deep Neural Networks7 Jul 2021
- 2021Uncertainty-Guided Progressive GANs for Medical Image Translation29 Jun 2021
- 2021Adaptive Test-Time Augmentation for Low-Power CPU13 May 2021
- 2021A Survey and Analysis on Automated Glioma Brain Tumor Segmentation and Overall Patient Survival Prediction26 Jan 2021
- 2021A Survey of Uncertainty in Deep Neural Networkscited by 675
- 2024Understanding Test-Time Augmentationcited by 23
- 2024Tyche: Stochastic In-Context Learning for Medical Image Segmentationcited by 20
- 2022Learning from partially labeled data for multi-organ and tumor segmentationcited by 18
- 2021Uncertainty-Guided Progressive GANs for Medical Image Translationcited by 16
- 2023Uncertainty-Aware Distillation for Semi-Supervised Few-Shot Class-Incremental Learningcited by 16
- 2023SwinFSR: Stereo Image Super-Resolution using SwinIR and Frequency Domain Knowledgecited by 10
- 2023Robust Uncertainty Quantification Using Conformalised Monte Carlo Predictioncited by 10
- 2023Uncertainty Aware Training to Improve Deep Learning Model Calibration for Classification of Cardiac MR Imagescited by 7
- 2024Test-time generative augmentation for medical image segmentationcited by 6
- 2024A Review of Bayesian Uncertainty Quantification in Deep Probabilistic Image Segmentationcited by 6
- 2024BayTTA: Uncertainty-aware medical image classification with optimized test-time augmentation using Bayesian model averagingcited by 5
12 most cited of 35 All 35 (JSON)
- 2026Quantification of Uncertainty with Adversarial Models in Medical Image Segmentation17 Jun 2026
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- 2025How To Make Your Cell Tracker Say "I dunno!"12 Mar 2025
- 2025Enhancing Uncertainty Estimation in Semantic Segmentation via Monte-Carlo Frequency Dropout20 Jan 2025
- 2024A Review of Bayesian Uncertainty Quantification in Deep Probabilistic Image Segmentation25 Nov 2024
- 2024Test-Time Augmentation Meets Variational Bayes19 Sep 2024
- 2024TTA-OOD: Test-time Augmentation for Improving Out-of-Distribution Detection in Gastrointestinal Vision19 Jul 2024
- 2024BayTTA: Uncertainty-aware medical image classification with optimized test-time augmentation using Bayesian model averaging25 Jun 2024
- 2024Test-time generative augmentation for medical image segmentation25 Jun 2024
- 2024Understanding Test-Time Augmentation10 Feb 2024
- 2024Tyche: Stochastic In-Context Learning for Medical Image Segmentation24 Jan 2024
- 2024Dual-Channel Reliable Breast Ultrasound Image Classification Based on Explainable Attribution and Uncertainty Quantification8 Jan 2024
12 newest of 35 All 35 (JSON)