Learning-based Efficient Graph Similarity Computation via Multi-Scale Convolutional Set Matching
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Abstract (arXiv)
Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs is typically NP-hard, a series of approximate methods have been proposed with a trade-off between accuracy and speed. Recently, several data-driven approaches based on neural networks have been proposed, most of which model the graph-graph similarity as the inner product of their graph-level representations, with different techniques proposed for generating one embedding per graph. However, using one fixed-dimensional embedding per graph may fail to fully capture graphs in varying sizes and link structures, a limitation that is especially problematic for the task of graph similarity computation, where the goal is to find the fine-grained difference between two graphs. In this paper, we address the problem of graph similarity computation from another perspective, by directly matching two sets of node embeddings without the need to use fixed-dimensional vectors to represent whole graphs for their similarity computation. The model, GraphSim, achieves the state-of-the-art performance on four real-world graph datasets under six out of eight settings (here we count a specific dataset and metric combination as one setting), compared to existing popular methods for approximate Graph Edit Distance (GED) and Maximum Common Subgraph (MCS) computation.
Key facts. Cited by 45 papers in the map (data through 7 Oct 2026). First posted on arXiv 10 Sep 2018.
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Citing papers per year: 2021: 4; 2022: 6; 2023: 9; 2024: 10; 2025: 12; 2026: 4.
45 papers.
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- 2021Combinatorial optimization and reasoning with graph neural networkscited by 267
- 2021Weisfeiler and Leman go Machine Learning: The Story so farcited by 121
- 2022Hybrid Relation Guided Set Matching for Few-shot Action Recognitioncited by 49
- 2021GREED: A Neural Framework for Learning Graph Distance Functionscited by 31
- 2024Efficient Graph Similarity Computation with Alignment Regularizationcited by 25
- 2023Conditional Graph Information Bottleneck for Molecular Relational Learningcited by 24
- 2025Understanding the Uncertainty of LLM Explanations: A Perspective Based on Reasoning Topologycited by 24
- 2022Graph Self-supervised Learning with Accurate Discrepancy Learningcited by 21
- 2023Shift-Robust Molecular Relational Learning with Causal Substructurecited by 15
- 2023Learning to Count Isomorphisms with Graph Neural Networkscited by 13
- 2023HyRSM++: Hybrid Relation Guided Temporal Set Matching for Few-shot Action Recognitioncited by 12
- 2023Zero-shot Item-based Recommendation via Multi-task Product Knowledge Graph Pre-Trainingcited by 12
33 more
- 2024Graph Edit Distance with General Costs Using Neural Set Divergencecited by 10
- 2023MATA*: Combining Learnable Node Matching with A* Algorithm for Approximate Graph Edit Distance Computationcited by 9
- 2022More Interpretable Graph Similarity Computation via Maximum Common Subgraph Inferencecited by 8
- 2022Maximum Common Subgraph Guided Graph Retrieval: Late and Early Interaction Networkscited by 8
- 2025Graph Neural Networks for Databases: A Surveycited by 6
- 2024A Unified Framework for Combinatorial Optimization Based on Graph Neural Networkscited by 4
- 2022Towards Accurate Subgraph Similarity Computation via Neural Graph Pruningcited by 3
- 2023D2Match: Leveraging Deep Learning and Degeneracy for Subgraph Matchingcited by 3
- 2022Privacy-Preserved Neural Graph Similarity Learningcited by 2
- 2024Rapid and Precise Topological Comparison with Merge Tree Neural Networkscited by 2
- 2025DiffGED: Computing Graph Edit Distance via Diffusion-based Graph Matchingcited by 2
- 2025SCENIR: Visual Semantic Clarity through Unsupervised Scene Graph Retrievalcited by 2
- 2025Towards Unsupervised Training of Matching-based Graph Edit Distance Solver via Preference-aware GANcited by 2
- 2025Iteratively Refined Early Interaction Alignment for Subgraph Matching based Graph Retrievalcited by 2
- 2026ATEX-CF: Attack-Informed Counterfactual Explanations for Graph Neural Networkscited by 2
- 2023Graph Edit Distance Learning via Different Attentioncited by 1
- 2024Network Interdiction Goes Neuralcited by 1
- 2024FuncEvalGMN: Evaluating Functional Correctness of SQL via Graph Matching Networkcited by 1
- 2025Neural Network Graph Similarity Computation Based on Graph Fusioncited by 1
- 2026SPRig: Self-Supervised Pose-Invariant Rigging from Mesh Sequencescited by 1
- 2021SPA-GCN: Efficient and Flexible GCN Accelerator with an Application for Graph Similarity Computationcited by 0
- 2023Co-attention Graph Pooling for Efficient Pairwise Graph Interaction Learningcited by 0
- 2024EUGENE: Explainable Structure-aware Graph Edit Distance Estimation with Generalized Edit Costscited by 0
- 2024Solving the Tree Containment Problem Using Graph Neural Networkscited by 0
- 2024SEGMN: A Structure-Enhanced Graph Matching Network for Graph Similarity Learningcited by 0
- 2024Graph Similarity Computation via Interpretable Neural Node Alignmentcited by 0
- 2025HeGMN: Heterogeneous Graph Matching Network for Learning Graph Similaritycited by 0
- 2025Rethinking Flexible Graph Similarity Computation: One-step Alignment with Global Guidancecited by 0
- 2025Graph2Region: Efficient Graph Similarity Learning with Structure and Scale Restorationcited by 0
- 2025Charting the Design Space of Neural Graph Representations for Subgraph Matchingcited by 0
- 2025GED-Consistent Disentanglement of Aligned and Unaligned Substructures for Graph Similarity Learningcited by 0
- 2026ReLU Networks for Exact Generation of Similar Graphscited by 0
- 2026Towards Metric-Faithful Neural Graph Matchingcited by 0
- 2026Towards Metric-Faithful Neural Graph Matching7 May 2026
- 2026ReLU Networks for Exact Generation of Similar Graphs7 Apr 2026
- 2026SPRig: Self-Supervised Pose-Invariant Rigging from Mesh Sequences13 Feb 2026
- 2026ATEX-CF: Attack-Informed Counterfactual Explanations for Graph Neural Networks5 Feb 2026
- 2025GED-Consistent Disentanglement of Aligned and Unaligned Substructures for Graph Similarity Learning25 Nov 2025
- 2025Charting the Design Space of Neural Graph Representations for Subgraph Matching27 Oct 2025
- 2025Iteratively Refined Early Interaction Alignment for Subgraph Matching based Graph Retrieval26 Oct 2025
- 2025Graph2Region: Efficient Graph Similarity Learning with Structure and Scale Restoration1 Oct 2025
- 2025SCENIR: Visual Semantic Clarity through Unsupervised Scene Graph Retrieval21 May 2025
- 2025Towards Unsupervised Training of Matching-based Graph Edit Distance Solver via Preference-aware GAN16 May 2025
- 2025Rethinking Flexible Graph Similarity Computation: One-step Alignment with Global Guidance9 Apr 2025
- 2025DiffGED: Computing Graph Edit Distance via Diffusion-based Graph Matching24 Mar 2025
33 more
- 2025HeGMN: Heterogeneous Graph Matching Network for Learning Graph Similarity11 Mar 2025
- 2025Neural Network Graph Similarity Computation Based on Graph Fusion25 Feb 2025
- 2025Understanding the Uncertainty of LLM Explanations: A Perspective Based on Reasoning Topology24 Feb 2025
- 2025Graph Neural Networks for Databases: A Survey18 Feb 2025
- 2024Graph Similarity Computation via Interpretable Neural Node Alignment13 Dec 2024
- 2024SEGMN: A Structure-Enhanced Graph Matching Network for Graph Similarity Learning6 Nov 2024
- 2024Graph Edit Distance with General Costs Using Neural Set Divergence26 Sep 2024
- 2024FuncEvalGMN: Evaluating Functional Correctness of SQL via Graph Matching Network9 Jul 2024
- 2024Efficient Graph Similarity Computation with Alignment Regularization21 Jun 2024
- 2024A Unified Framework for Combinatorial Optimization Based on Graph Neural Networks19 Jun 2024
- 2024Network Interdiction Goes Neural26 May 2024
- 2024Solving the Tree Containment Problem Using Graph Neural Networks15 Apr 2024
- 2024Rapid and Precise Topological Comparison with Merge Tree Neural Networks8 Apr 2024
- 2024EUGENE: Explainable Structure-aware Graph Edit Distance Estimation with Generalized Edit Costs8 Feb 2024
- 2023MATA*: Combining Learnable Node Matching with A* Algorithm for Approximate Graph Edit Distance Computation4 Nov 2023
- 2023Graph Edit Distance Learning via Different Attention26 Aug 2023
- 2023Co-attention Graph Pooling for Efficient Pairwise Graph Interaction Learning28 Jul 2023
- 2023D2Match: Leveraging Deep Learning and Degeneracy for Subgraph Matching10 Jun 2023
- 2023Shift-Robust Molecular Relational Learning with Causal Substructure29 May 2023
- 2023Zero-shot Item-based Recommendation via Multi-task Product Knowledge Graph Pre-Training12 May 2023
- 2023Conditional Graph Information Bottleneck for Molecular Relational Learning29 Apr 2023
- 2023Learning to Count Isomorphisms with Graph Neural Networks7 Feb 2023
- 2023HyRSM++: Hybrid Relation Guided Temporal Set Matching for Few-shot Action Recognition9 Jan 2023
- 2022Privacy-Preserved Neural Graph Similarity Learning21 Oct 2022
- 2022Maximum Common Subgraph Guided Graph Retrieval: Late and Early Interaction Networks20 Oct 2022
- 2022Towards Accurate Subgraph Similarity Computation via Neural Graph Pruning19 Oct 2022
- 2022More Interpretable Graph Similarity Computation via Maximum Common Subgraph Inference9 Aug 2022
- 2022Hybrid Relation Guided Set Matching for Few-shot Action Recognition28 Apr 2022
- 2022Graph Self-supervised Learning with Accurate Discrepancy Learning7 Feb 2022
- 2021GREED: A Neural Framework for Learning Graph Distance Functions24 Dec 2021
- 2021Weisfeiler and Leman go Machine Learning: The Story so far18 Dec 2021
- 2021SPA-GCN: Efficient and Flexible GCN Accelerator with an Application for Graph Similarity Computation10 Nov 2021
- 2021Combinatorial optimization and reasoning with graph neural networks18 Feb 2021
- 2021Combinatorial optimization and reasoning with graph neural networkscited by 267
- 2021Weisfeiler and Leman go Machine Learning: The Story so farcited by 121
- 2022Hybrid Relation Guided Set Matching for Few-shot Action Recognitioncited by 49
- 2021GREED: A Neural Framework for Learning Graph Distance Functionscited by 31
- 2024Efficient Graph Similarity Computation with Alignment Regularizationcited by 25
- 2023Conditional Graph Information Bottleneck for Molecular Relational Learningcited by 24
- 2022Graph Self-supervised Learning with Accurate Discrepancy Learningcited by 21
- 2023Shift-Robust Molecular Relational Learning with Causal Substructurecited by 15
- 2023Learning to Count Isomorphisms with Graph Neural Networkscited by 13
- 2023HyRSM++: Hybrid Relation Guided Temporal Set Matching for Few-shot Action Recognitioncited by 12
- 2023Zero-shot Item-based Recommendation via Multi-task Product Knowledge Graph Pre-Trainingcited by 12
- 2024Graph Edit Distance with General Costs Using Neural Set Divergencecited by 10
12 most cited of 43 All 43 (JSON)
- 2026Towards Metric-Faithful Neural Graph Matching7 May 2026
- 2026ReLU Networks for Exact Generation of Similar Graphs7 Apr 2026
- 2026SPRig: Self-Supervised Pose-Invariant Rigging from Mesh Sequences13 Feb 2026
- 2026ATEX-CF: Attack-Informed Counterfactual Explanations for Graph Neural Networks5 Feb 2026
- 2025GED-Consistent Disentanglement of Aligned and Unaligned Substructures for Graph Similarity Learning25 Nov 2025
- 2025Charting the Design Space of Neural Graph Representations for Subgraph Matching27 Oct 2025
- 2025Iteratively Refined Early Interaction Alignment for Subgraph Matching based Graph Retrieval26 Oct 2025
- 2025Graph2Region: Efficient Graph Similarity Learning with Structure and Scale Restoration1 Oct 2025
- 2025SCENIR: Visual Semantic Clarity through Unsupervised Scene Graph Retrieval21 May 2025
- 2025Towards Unsupervised Training of Matching-based Graph Edit Distance Solver via Preference-aware GAN16 May 2025
- 2025Rethinking Flexible Graph Similarity Computation: One-step Alignment with Global Guidance9 Apr 2025
- 2025HeGMN: Heterogeneous Graph Matching Network for Learning Graph Similarity11 Mar 2025
12 newest of 43 All 43 (JSON)