StainGAN: Stain Style Transfer for Digital Histological Images
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Abstract (arXiv)
Digitized Histological diagnosis is in increasing demand. However, color variations due to various factors are imposing obstacles to the diagnosis process. The problem of stain color variations is a well-defined problem with many proposed solutions. Most of these solutions are highly dependent on a reference template slide. We propose a deep-learning solution inspired by CycleGANs that is trained end-to-end, eliminating the need for an expert to pick a representative reference slide. Our approach showed superior results quantitatively and qualitatively against the state of the art methods (10% improvement visually using SSIM). We further validated our method on a clinical use-case, namely Breast Cancer tumor classification, showing 12% increase in AUC. The code will be made publicly available.
Key facts. Cited by 68 papers in the map (data through 7 Oct 2026). First posted on arXiv 4 Apr 2018.
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Citing papers per year: 2021: 7; 2022: 17; 2023: 18; 2024: 9; 2025: 12; 2026: 5.
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- 2022BCI: Breast Cancer Immunohistochemical Image Generation through Pyramid Pix2pixcited by 61
- 2022Multiple Instance Learning for Digital Pathology: A Review on the State-of-the-Art, Limitations & Future Potentialcited by 54
- 2022RandStainNA: Learning Stain-Agnostic Features from Histology Slides by Bridging Stain Augmentation and Normalizationcited by 32
- 2021Structure-Preserving Multi-Domain Stain Color Augmentation using Style-Transfer with Disentangled Representationscited by 31
- 2021Algorithm Fairness in AI for Medicine and Healthcarecited by 21
- 2025A Survey on Computational Pathology Foundation Models: Datasets, Adaptation Strategies, and Evaluation Taskscited by 15
- 2022Test-time image-to-image translation ensembling improves out-of-distribution generalization in histopathologycited by 13
- 2022Federated Stain Normalization for Computational Pathologycited by 11
- 2023Structural Cycle GAN for Virtual Immunohistochemistry Staining of Gland Markers in the Coloncited by 10
- 2024VIMs: Virtual Immunohistochemistry Multiplex staining via Text-to-Stain Diffusion Trained on Uniplex Stainscited by 10
- 2022From Modern CNNs to Vision Transformers: Assessing the Performance, Robustness, and Classification Strategies of Deep Learning Models in Histopathologycited by 9
- 2021Improving Unsupervised Stain-To-Stain Translation using Self-Supervision and Meta-Learningcited by 7
38 more
- 2022RestainNet: a self-supervised digital re-stainer for stain normalizationcited by 7
- 2022Deep Learning Generates Synthetic Cancer Histology for Explainability and Educationcited by 7
- 2023Digital staining in optical microscopy using deep learning -- a reviewcited by 7
- 2023A comparative evaluation of image-to-image translation methods for stain transfer in histopathologycited by 7
- 2023Breast Cancer Immunohistochemical Image Generation: a Benchmark Dataset and Challenge Reviewcited by 7
- 2023ContriMix: Scalable stain color augmentation for domain generalization without domain labels in digital pathologycited by 7
- 2025Pathology Foundation Models are Scanner Sensitive: Benchmark and Mitigation with Contrastive ScanGen Losscited by 7
- 2024Generating Seamless Virtual Immunohistochemical Whole Slide Images with Content and Color Consistencycited by 6
- 2022H&E-adversarial network: a convolutional neural network to learn stain-invariant features through Hematoxylin & Eosin regressioncited by 5
- 2022MultiPathGAN: Structure Preserving Stain Normalization using Unsupervised Multi-domain Adversarial Network with Perception Losscited by 4
- 2023Multi-domain stain normalization for digital pathology: A cycle-consistent adversarial network for whole slide imagescited by 4
- 2023Domain adaptation using optimal transport for invariant learning using histopathology datasetscited by 4
- 2024Dataset Distillation for Histopathology Image Classificationcited by 4
- 2021A generative adversarial approach to facilitate archival-quality histopathologic diagnoses from frozen tissue sectionscited by 3
- 2022Towards Measuring Domain Shift in Histopathological Stain Translation in an Unsupervised Mannercited by 3
- 2022Pseudo-Data based Self-Supervised Federated Learning for Classification of Histopathological Imagescited by 3
- 2022HistoStarGAN: A Unified Approach to Stain Normalisation, Stain Transfer and Stain Invariant Segmentation in Renal Histopathologycited by 3
- 2023Generative Adversarial Networks for Stain Normalisation in Histopathologycited by 3
- 2022Deep learning based domain adaptation for mitochondria segmentation on EM volumescited by 2
- 2022FUSION: Fully Unsupervised Test-Time Stain Adaptation via Fused Normalization Statisticscited by 2
- 2023Standardized CycleGAN training for unsupervised stain adaptation in invasive carcinoma classification for breast histopathologycited by 2
- 2023Learning to Generalize towards Unseen Domains via a Content-Aware Style Invariant Model for Disease Detection from Chest X-rayscited by 2
- 2023A Laplacian Pyramid Based Generative H&E Stain Augmentation Networkcited by 2
- 2024ReStainGAN: Leveraging IHC to IF Stain Domain Translation for in-silico Data Generationcited by 2
- 2024Auxiliary CycleGAN-guidance for Task-Aware Domain Translation from Duplex to Monoplex IHC Imagescited by 2
- 2024Mask-guided cross-image attention for zero-shot in-silico histopathologic image generation with a diffusion modelcited by 2
- 2021Histo-fetch -- On-the-fly processing of gigapixel whole slide images simplifies and speeds neural network trainingcited by 1
- 2023Histopathological Image Analysis with Style-Augmented Feature Domain Mixing for Improved Generalizationcited by 1
- 2024Data Alchemy: Mitigating Cross-Site Model Variability Through Test Time Data Calibrationcited by 1
- 2024Are nuclear masks all you need for improved out-of-domain generalisation? A closer look at cancer classification in histopathologycited by 1
- 2025MorphGen: Morphology-Guided Representation Learning for Robust Single-Domain Generalization in Histopathological Cancer Classificationcited by 1
- 2026FedStain: Modeling Higher-Order Stain Statistics for Federated Domain Generalization in Computational Pathologycited by 1
- 2021Deep learning-based bias transfer for overcoming laboratory differences of microscopic imagescited by 0
- 2021Multi-Channel Auto-Encoders and a Novel Dataset for Learning Domain Invariant Representations of Histopathology Imagescited by 0
- 2022Adversarial Stain Transfer to Study the Effect of Color Variation on Cell Instance Segmentationcited by 0
- 2022H&E Stain Normalization using U-Netcited by 0
- 2023Distribution Aligned Diffusion and Prototype-guided network for Unsupervised Domain Adaptive Segmentationcited by 0
- 2023Improving Stain Invariance of CNNs for Segmentation by Fusing Channel Attention and Domain-Adversarial Trainingcited by 0
50 most cited of 68 All 68 (JSON)
- 2026StainPresetNet: Stain Preset Network for Fast Multi-to-Multi Stain Normalization1 Sep 2026
- 2026Mitigating Batch Effects in Histopathology via Language-Mediated Robust Embedding Generation27 Jun 2026
- 2026Beyond Morphology: Quantifying the Diagnostic Power of Color Features in Cancer Classification18 May 2026
- 2026FedStain: Modeling Higher-Order Stain Statistics for Federated Domain Generalization in Computational Pathology14 May 2026
- 2026Histopathology Image Normalization via Latent Manifold Compaction27 Feb 2026
- 2025When normalization hallucinates: unseen risks in AI-powered whole slide image processing8 Dec 2025
- 2025K-Stain: Keypoint-Driven Correspondence for H&E-to-IHC Virtual Staining10 Nov 2025
- 2025Adaptive Stain Normalization for Cross-Domain Medical Histology8 Oct 2025
- 2025TRUST: Token-dRiven Ultrasound Style Transfer for Cross-Device Adaptation30 Aug 2025
- 2025MorphGen: Morphology-Guided Representation Learning for Robust Single-Domain Generalization in Histopathological Cancer Classification30 Aug 2025
- 2025Pathology Foundation Models are Scanner Sensitive: Benchmark and Mitigation with Contrastive ScanGen Loss29 Jul 2025
- 2025Staining normalization in histopathology: Method benchmarking using multicenter dataset23 Jun 2025
38 more
- 2025StainPIDR: A Pathological Image Decouplingand Reconstruction Method for Stain Normalization Based on Color Vector Quantization and Structure Restaining22 Jun 2025
- 2025SiliCoN: Simultaneous Nuclei Segmentation and Color Normalization of Histological Images8 Jun 2025
- 2025SCFANet: Style Distribution Constraint Feature Alignment Network For Pathological Staining Translation1 Apr 2025
- 2025LSA: Latent Style Augmentation Towards Stain-Agnostic Cervical Cancer Screening9 Mar 2025
- 2025A Survey on Computational Pathology Foundation Models: Datasets, Adaptation Strategies, and Evaluation Tasks27 Jan 2025
- 2024Are nuclear masks all you need for improved out-of-domain generalisation? A closer look at cancer classification in histopathology14 Nov 2024
- 2024Generating Seamless Virtual Immunohistochemical Whole Slide Images with Content and Color Consistency1 Oct 2024
- 2024Dataset Distillation for Histopathology Image Classification19 Aug 2024
- 2024VIMs: Virtual Immunohistochemistry Multiplex staining via Text-to-Stain Diffusion Trained on Uniplex Stains26 Jul 2024
- 2024Data Alchemy: Mitigating Cross-Site Model Variability Through Test Time Data Calibration18 Jul 2024
- 2024Mask-guided cross-image attention for zero-shot in-silico histopathologic image generation with a diffusion model16 Jul 2024
- 2024Mitigating analytical variability in fMRI results with style transfer4 Apr 2024
- 2024Auxiliary CycleGAN-guidance for Task-Aware Domain Translation from Duplex to Monoplex IHC Images12 Mar 2024
- 2024ReStainGAN: Leveraging IHC to IF Stain Domain Translation for in-silico Data Generation11 Mar 2024
- 2023Stain Consistency Learning: Handling Stain Variation for Automatic Digital Pathology Segmentation11 Nov 2023
- 2023Histopathological Image Analysis with Style-Augmented Feature Domain Mixing for Improved Generalization31 Oct 2023
- 2023Style transfer between Microscopy and Magnetic Resonance Imaging via Generative Adversarial Network in small sample size settings16 Oct 2023
- 2023Structural Cycle GAN for Virtual Immunohistochemistry Staining of Gland Markers in the Colon25 Aug 2023
- 2023Generative Adversarial Networks for Stain Normalisation in Histopathology5 Aug 2023
- 2023ContriMix: Scalable stain color augmentation for domain generalization without domain labels in digital pathology7 Jun 2023
- 2023A Laplacian Pyramid Based Generative H&E Stain Augmentation Network23 May 2023
- 2023Color Deconvolution applied to Domain Adaptation in HER2 histopathological images12 May 2023
- 2023ParamNet: A Dynamic Parameter Network for Fast Multi-to-One Stain Normalization11 May 2023
- 2023Breast Cancer Immunohistochemical Image Generation: a Benchmark Dataset and Challenge Review5 May 2023
- 2023Improving Stain Invariance of CNNs for Segmentation by Fusing Channel Attention and Domain-Adversarial Training22 Apr 2023
- 2023A comparative evaluation of image-to-image translation methods for stain transfer in histopathology29 Mar 2023
- 2023Distribution Aligned Diffusion and Prototype-guided network for Unsupervised Domain Adaptive Segmentation22 Mar 2023
- 2023Digital staining in optical microscopy using deep learning -- a review14 Mar 2023
- 2023Domain adaptation using optimal transport for invariant learning using histopathology datasets3 Mar 2023
- 2023Learning to Generalize towards Unseen Domains via a Content-Aware Style Invariant Model for Disease Detection from Chest X-rays27 Feb 2023
- 2023Standardized CycleGAN training for unsupervised stain adaptation in invasive carcinoma classification for breast histopathology30 Jan 2023
- 2023Multi-domain stain normalization for digital pathology: A cycle-consistent adversarial network for whole slide images23 Jan 2023
- 2022Deep Learning Generates Synthetic Cancer Histology for Explainability and Education12 Nov 2022
- 2022H&E Stain Normalization using U-Net10 Nov 2022
- 2022HistoStarGAN: A Unified Approach to Stain Normalisation, Stain Transfer and Stain Invariant Segmentation in Renal Histopathology18 Oct 2022
- 2022Federated Stain Normalization for Computational Pathology29 Sep 2022
- 2022Adversarial Stain Transfer to Study the Effect of Color Variation on Cell Instance Segmentation1 Sep 2022
- 2022FUSION: Fully Unsupervised Test-Time Stain Adaptation via Fused Normalization Statistics30 Aug 2022
50 newest of 68 All 68 (JSON)
- 2024VIMs: Virtual Immunohistochemistry Multiplex staining via Text-to-Stain Diffusion Trained on Uniplex Stainscited by 10
- 2024Mask-guided cross-image attention for zero-shot in-silico histopathologic image generation with a diffusion modelcited by 2
- 2023Distribution Aligned Diffusion and Prototype-guided network for Unsupervised Domain Adaptive Segmentationcited by 0
- 2024VIMs: Virtual Immunohistochemistry Multiplex staining via Text-to-Stain Diffusion Trained on Uniplex Stains26 Jul 2024
- 2024Mask-guided cross-image attention for zero-shot in-silico histopathologic image generation with a diffusion model16 Jul 2024
- 2023Distribution Aligned Diffusion and Prototype-guided network for Unsupervised Domain Adaptive Segmentation22 Mar 2023
- 2022BCI: Breast Cancer Immunohistochemical Image Generation through Pyramid Pix2pixcited by 61
- 2022Multiple Instance Learning for Digital Pathology: A Review on the State-of-the-Art, Limitations & Future Potentialcited by 54
- 2022RandStainNA: Learning Stain-Agnostic Features from Histology Slides by Bridging Stain Augmentation and Normalizationcited by 32
- 2021Structure-Preserving Multi-Domain Stain Color Augmentation using Style-Transfer with Disentangled Representationscited by 31
- 2021Algorithm Fairness in AI for Medicine and Healthcarecited by 21
- 2025A Survey on Computational Pathology Foundation Models: Datasets, Adaptation Strategies, and Evaluation Taskscited by 15
- 2022Test-time image-to-image translation ensembling improves out-of-distribution generalization in histopathologycited by 13
- 2022Federated Stain Normalization for Computational Pathologycited by 11
- 2023Structural Cycle GAN for Virtual Immunohistochemistry Staining of Gland Markers in the Coloncited by 10
- 2022From Modern CNNs to Vision Transformers: Assessing the Performance, Robustness, and Classification Strategies of Deep Learning Models in Histopathologycited by 9
- 2021Improving Unsupervised Stain-To-Stain Translation using Self-Supervision and Meta-Learningcited by 7
- 2022RestainNet: a self-supervised digital re-stainer for stain normalizationcited by 7
12 most cited of 65 All 65 (JSON)
- 2026StainPresetNet: Stain Preset Network for Fast Multi-to-Multi Stain Normalization1 Sep 2026
- 2026Mitigating Batch Effects in Histopathology via Language-Mediated Robust Embedding Generation27 Jun 2026
- 2026Beyond Morphology: Quantifying the Diagnostic Power of Color Features in Cancer Classification18 May 2026
- 2026FedStain: Modeling Higher-Order Stain Statistics for Federated Domain Generalization in Computational Pathology14 May 2026
- 2026Histopathology Image Normalization via Latent Manifold Compaction27 Feb 2026
- 2025When normalization hallucinates: unseen risks in AI-powered whole slide image processing8 Dec 2025
- 2025K-Stain: Keypoint-Driven Correspondence for H&E-to-IHC Virtual Staining10 Nov 2025
- 2025Adaptive Stain Normalization for Cross-Domain Medical Histology8 Oct 2025
- 2025TRUST: Token-dRiven Ultrasound Style Transfer for Cross-Device Adaptation30 Aug 2025
- 2025MorphGen: Morphology-Guided Representation Learning for Robust Single-Domain Generalization in Histopathological Cancer Classification30 Aug 2025
- 2025Pathology Foundation Models are Scanner Sensitive: Benchmark and Mitigation with Contrastive ScanGen Loss29 Jul 2025
- 2025Staining normalization in histopathology: Method benchmarking using multicenter dataset23 Jun 2025
12 newest of 65 All 65 (JSON)