A Survey on Computational Pathology Foundation Models: Datasets, Adaptation Strategies, and Evaluation Tasks
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Abstract (arXiv)
Computational pathology foundation models (CPathFMs) have emerged as a powerful approach for analyzing histopathological data, leveraging self-supervised learning to extract robust feature representations from unlabeled whole-slide images. These models, categorized into uni-modal and multi-modal frameworks, have demonstrated promise in automating complex pathology tasks such as segmentation, classification, and biomarker discovery. However, the development of CPathFMs presents significant challenges, such as limited data accessibility, high variability across datasets, the necessity for domain-specific adaptation, and the lack of standardized evaluation benchmarks. This survey provides a comprehensive review of CPathFMs in computational pathology, focusing on datasets, adaptation strategies, and evaluation tasks. We analyze key techniques, such as contrastive learning and multi-modal integration, and highlight existing gaps in current research. Finally, we explore future directions from four perspectives for advancing CPathFMs. This survey serves as a valuable resource for researchers, clinicians, and AI practitioners, guiding the advancement of CPathFMs toward robust and clinically applicable AI-driven pathology solutions.
Key facts. Cited by 15 papers in the map (data through 7 Oct 2026). Builds on 39 of its 77 references that are in the map. First posted on arXiv 27 Jan 2025.
Builds on
39 of 77 references.
References · 39
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- 2021An Empirical Study of Training Self-Supervised Vision Transformerscited by 1,610
- 2022CoCa: Contrastive Captioners are Image-Text Foundation Modelscited by 1,265
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- 2021iBOT: Image BERT Pre-Training with Online Tokenizercited by 891
- 2022Image as a Foreign Language: BEiT Pretraining for All Vision and Vision-Language Taskscited by 510
27 more
- 2023BiomedCLIP: a multimodal biomedical foundation model pretrained from fifteen million scientific image-text pairscited by 506
- 2022BEiT v2: Masked Image Modeling with Vector-Quantized Visual Tokenizerscited by 298
- 2023BiomedGPT: A Generalist Vision-Language Foundation Model for Diverse Biomedical Taskscited by 201
- 2023LongNet: Scaling Transformers to 1,000,000,000 Tokenscited by 201
- 2023Quilt-1M: One Million Image-Text Pairs for Histopathologycited by 192
- 2019Quantifying the effects of data augmentation and stain color normalization in convolutional neural networks for computational pathologycited by 172
- 2024Multimodal Whole Slide Foundation Model for Pathologycited by 156
- 2022Benchmarking Self-Supervised Learning on Diverse Pathology Datasetscited by 148
- 2024Virchow2: Scaling Self-Supervised Mixed Magnification Models in Pathologycited by 144
- 2024BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at oncecited by 107
- 2023Virchow: A Million-Slide Digital Pathology Foundation Modelcited by 86
- 2024PRISM: A Multi-Modal Generative Foundation Model for Slide-Level Histopathologycited by 80
- 2018StainGAN: Stain Style Transfer for Digital Histological Imagescited by 68
- 2024Phikon-v2, A large and public feature extractor for biomarker predictioncited by 67
- 2024A Clinical Benchmark of Public Self-Supervised Pathology Foundation Modelscited by 64
- 2024RULE: Reliable Multimodal RAG for Factuality in Medical Vision Language Modelscited by 58
- 2023PathAsst: A Generative Foundation AI Assistant Towards Artificial General Intelligence of Pathologycited by 57
- 2024Hibou: A Family of Foundational Vision Transformers for Pathologycited by 52
- 2024Transcriptomics-guided Slide Representation Learning in Computational Pathologycited by 50
- 2024RudolfV: A Foundation Model by Pathologists for Pathologistscited by 40
- 2024WSI-LLaVA: A Multimodal Large Language Model for Whole Slide Imagecited by 37
- 2024Towards A Generalizable Pathology Foundation Model via Unified Knowledge Distillationcited by 30
- 2024Towards Large-Scale Training of Pathology Foundation Modelscited by 19
- 2024PA-LLaVA: A Large Language-Vision Assistant for Human Pathology Image Understandingcited by 15
- 2024Knowledge-enhanced Visual-Language Pretraining for Computational Pathologycited by 14
- 2024A New Era in Computational Pathology: A Survey on Foundation and Vision-Language Modelscited by 9
- 2024Pathology Foundation Modelscited by 7
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Citing papers per year: 2025: 5; 2026: 10.
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- 2025Multi-Modal Foundation Models for Computational Pathology: A Surveycited by 9
- 2025HISTAI: An Open-Source, Large-Scale Whole Slide Image Dataset for Computational Pathologycited by 9
- 2026Scanner-Induced Domain Shifts Undermine the Robustness of Pathology Foundation Modelscited by 9
- 2025Beyond the Failures: Rethinking Foundation Models in Pathologycited by 6
- 2025PathFLIP: Fine-grained Language-Image Pretraining for Versatile Computational Pathologycited by 4
- 2025From Classification to Cross-Modal Understanding: Leveraging Vision-Language Models for Fine-Grained Renal Pathologycited by 1
- 2026ReinPath: A Multimodal Reinforcement Learning Approach for Pathologycited by 1
- 2026Benchmarking Pathology Foundation Models for Breast Cancer Survival Predictioncited by 1
- 2026Democratizing and accelerating AI-driven pathology research through agentic intelligencecited by 1
- 2026ReconMIL: Synergizing Latent Space Reconstruction with Bi-Stream Mamba for Whole Slide Image Analysiscited by 0
- 2026SlideCheck: Guiding Self-Supervised Pretraining of Pathology Foundation Models via Dataset Distributionscited by 0
- 2026Harnessing Adversarial Distillation to Customise Debiased, Disease-Specific Pathology Foundation Models for Breast Cancercited by 0
3 more
- 2026Training-Free Out-of-Distribution Detection for Pathology Whole-Slide Imagescited by 0
- 2026EXPOSE: Explainable and Domain-Robust Embeddings from Pathology Vision Foundation Models using Sparse Autoencoderscited by 0
- 2026Cellular-Communication-Level Interpretability for Pathology Foundation Models via Graph Distillation on Microenvironmentcited by 0
- 2026EXPOSE: Explainable and Domain-Robust Embeddings from Pathology Vision Foundation Models using Sparse Autoencoders28 Aug 2026
- 2026Cellular-Communication-Level Interpretability for Pathology Foundation Models via Graph Distillation on Microenvironment2 Aug 2026
- 2026Training-Free Out-of-Distribution Detection for Pathology Whole-Slide Images2 Aug 2026
- 2026Harnessing Adversarial Distillation to Customise Debiased, Disease-Specific Pathology Foundation Models for Breast Cancer2 Aug 2026
- 2026Democratizing and accelerating AI-driven pathology research through agentic intelligence12 Jun 2026
- 2026SlideCheck: Guiding Self-Supervised Pretraining of Pathology Foundation Models via Dataset Distributions28 May 2026
- 2026Benchmarking Pathology Foundation Models for Breast Cancer Survival Prediction27 Apr 2026
- 2026ReconMIL: Synergizing Latent Space Reconstruction with Bi-Stream Mamba for Whole Slide Image Analysis20 Mar 2026
- 2026ReinPath: A Multimodal Reinforcement Learning Approach for Pathology21 Jan 2026
- 2026Scanner-Induced Domain Shifts Undermine the Robustness of Pathology Foundation Models7 Jan 2026
- 2025PathFLIP: Fine-grained Language-Image Pretraining for Versatile Computational Pathology19 Dec 2025
- 2025From Classification to Cross-Modal Understanding: Leveraging Vision-Language Models for Fine-Grained Renal Pathology15 Nov 2025
- 2025Multi-Modal Foundation Models for Computational Pathology: A Surveycited by 9
- 2025HISTAI: An Open-Source, Large-Scale Whole Slide Image Dataset for Computational Pathologycited by 9
- 2026Scanner-Induced Domain Shifts Undermine the Robustness of Pathology Foundation Modelscited by 9
- 2025Beyond the Failures: Rethinking Foundation Models in Pathologycited by 6
- 2026Benchmarking Pathology Foundation Models for Breast Cancer Survival Predictioncited by 1
- 2026SlideCheck: Guiding Self-Supervised Pretraining of Pathology Foundation Models via Dataset Distributionscited by 0
- 2026Harnessing Adversarial Distillation to Customise Debiased, Disease-Specific Pathology Foundation Models for Breast Cancercited by 0
- 2026Training-Free Out-of-Distribution Detection for Pathology Whole-Slide Imagescited by 0
- 2026EXPOSE: Explainable and Domain-Robust Embeddings from Pathology Vision Foundation Models using Sparse Autoencoderscited by 0
- 2026Cellular-Communication-Level Interpretability for Pathology Foundation Models via Graph Distillation on Microenvironmentcited by 0
- 2026EXPOSE: Explainable and Domain-Robust Embeddings from Pathology Vision Foundation Models using Sparse Autoencoders28 Aug 2026
- 2026Cellular-Communication-Level Interpretability for Pathology Foundation Models via Graph Distillation on Microenvironment2 Aug 2026
- 2026Training-Free Out-of-Distribution Detection for Pathology Whole-Slide Images2 Aug 2026
- 2026Harnessing Adversarial Distillation to Customise Debiased, Disease-Specific Pathology Foundation Models for Breast Cancer2 Aug 2026
- 2026SlideCheck: Guiding Self-Supervised Pretraining of Pathology Foundation Models via Dataset Distributions28 May 2026
- 2026Benchmarking Pathology Foundation Models for Breast Cancer Survival Prediction27 Apr 2026
- 2026Scanner-Induced Domain Shifts Undermine the Robustness of Pathology Foundation Models7 Jan 2026
- 2025Beyond the Failures: Rethinking Foundation Models in Pathology27 Oct 2025
- 2025HISTAI: An Open-Source, Large-Scale Whole Slide Image Dataset for Computational Pathology17 May 2025
- 2025Multi-Modal Foundation Models for Computational Pathology: A Survey12 Mar 2025