Analysis of the Impact of Negative Sampling on Link Prediction in Knowledge Graphs
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Abstract (arXiv)
Knowledge graphs are large, useful, but incomplete knowledge repositories. They encode knowledge through entities and relations which define each other through the connective structure of the graph. This has inspired methods for the joint embedding of entities and relations in continuous low-dimensional vector spaces, that can be used to induce new edges in the graph, i.e., link prediction in knowledge graphs. Learning these representations relies on contrasting positive instances with negative ones. Knowledge graphs include only positive relation instances, leaving the door open for a variety of methods for selecting negative examples. In this paper we present an empirical study on the impact of negative sampling on the learned embeddings, assessed through the task of link prediction. We use state-of-the-art knowledge graph embeddings -- rescal , TransE, DistMult and ComplEX -- and evaluate on benchmark datasets -- FB15k and WN18. We compare well known methods for negative sampling and additionally propose embedding based sampling methods. We note a marked difference in the impact of these sampling methods on the two datasets, with the "traditional" corrupting positives method leading to best results on WN18, while embedding based methods benefiting the task on FB15k.
Key facts. Cited by 22 papers in the map (data through 7 Oct 2026). First posted on arXiv 22 Aug 2017.
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Citing papers per year: 2021: 2; 2022: 5; 2023: 2; 2024: 7; 2025: 3; 2026: 3.
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- 2022Towards Better Evaluation for Dynamic Link Predictioncited by 120
- 2021Synthesizing Adversarial Negative Responses for Robust Response Ranking and Evaluationcited by 16
- 2024Does Negative Sampling Matter? A Review with Insights into its Theory and Applicationscited by 14
- 2021Are Missing Links Predictable? An Inferential Benchmark for Knowledge Graph Completioncited by 9
- 2024Negative Sampling in Knowledge Graph Representation Learning: A Reviewcited by 9
- 2023Treat Different Negatives Differently: Enriching Loss Functions with Domain and Range Constraints for Link Predictioncited by 3
- 2022Kronecker Decomposition for Knowledge Graph Embeddingscited by 2
- 2023Pre-training Transformers for Knowledge Graph Completioncited by 2
- 2024TWIG: Towards pre-hoc Hyperparameter Optimisation and Cross-Graph Generalisation via Simulated KGE Modelscited by 2
- 2024A Survey on Knowledge Graph Structure and Knowledge Graph Embeddingscited by 2
- 2022Leveraging Wikidata's edit history in knowledge graph refinement taskscited by 1
- 2024Counterfactual Reasoning with Knowledge Graph Embeddingscited by 1
10 more
- 2025Enhancing PyKEEN with Multiple Negative Sampling Solutions for Knowledge Graph Embedding Modelscited by 1
- 2022Scaling Knowledge Graph Embedding Modelscited by 0
- 2022A knowledge graph representation learning approach to predict novel kinase-substrate interactionscited by 0
- 2024Domain and Range Aware Synthetic Negatives Generation for Knowledge Graph Embedding Modelscited by 0
- 2024Extending TWIG: Zero-Shot Predictive Hyperparameter Selection for KGEs based on Graph Structurecited by 0
- 2025Utilizing Graph Neural Networks for Effective Link Prediction in Microservice Architecturescited by 0
- 2025Improving Knowledge Graph Embeddings through Contrastive Learning with Negative Statementscited by 0
- 2026Plausibility-Driven Prioritization of Candidate Biomedical Annotationscited by 0
- 2026PyKEEN-NSX: A Modular Framework for Static, Dynamic and Schema-Aware Negative Sampling in PyKEENcited by 0
- 2026HyGRAIL: Cost-Aware and Evidence-Grounded Scientific Hypothesis Discovery over Knowledge Graphscited by 0
- 2026HyGRAIL: Cost-Aware and Evidence-Grounded Scientific Hypothesis Discovery over Knowledge Graphs2 Sep 2026
- 2026PyKEEN-NSX: A Modular Framework for Static, Dynamic and Schema-Aware Negative Sampling in PyKEEN31 Aug 2026
- 2026Plausibility-Driven Prioritization of Candidate Biomedical Annotations22 Jul 2026
- 2025Improving Knowledge Graph Embeddings through Contrastive Learning with Negative Statements13 Oct 2025
- 2025Enhancing PyKEEN with Multiple Negative Sampling Solutions for Knowledge Graph Embedding Models7 Aug 2025
- 2025Utilizing Graph Neural Networks for Effective Link Prediction in Microservice Architectures25 Jan 2025
- 2024Extending TWIG: Zero-Shot Predictive Hyperparameter Selection for KGEs based on Graph Structure19 Dec 2024
- 2024A Survey on Knowledge Graph Structure and Knowledge Graph Embeddings13 Dec 2024
- 2024Domain and Range Aware Synthetic Negatives Generation for Knowledge Graph Embedding Models22 Nov 2024
- 2024Counterfactual Reasoning with Knowledge Graph Embeddings11 Mar 2024
- 2024Negative Sampling in Knowledge Graph Representation Learning: A Review29 Feb 2024
- 2024Does Negative Sampling Matter? A Review with Insights into its Theory and Applications27 Feb 2024
10 more
- 2024TWIG: Towards pre-hoc Hyperparameter Optimisation and Cross-Graph Generalisation via Simulated KGE Models8 Feb 2024
- 2023Pre-training Transformers for Knowledge Graph Completion28 Mar 2023
- 2023Treat Different Negatives Differently: Enriching Loss Functions with Domain and Range Constraints for Link Prediction1 Mar 2023
- 2022Leveraging Wikidata's edit history in knowledge graph refinement tasks27 Oct 2022
- 2022Towards Better Evaluation for Dynamic Link Prediction20 Jul 2022
- 2022A knowledge graph representation learning approach to predict novel kinase-substrate interactions5 Jun 2022
- 2022Kronecker Decomposition for Knowledge Graph Embeddings13 May 2022
- 2022Scaling Knowledge Graph Embedding Models8 Jan 2022
- 2021Are Missing Links Predictable? An Inferential Benchmark for Knowledge Graph Completion3 Aug 2021
- 2021Synthesizing Adversarial Negative Responses for Robust Response Ranking and Evaluation10 Jun 2021
- 2022Towards Better Evaluation for Dynamic Link Predictioncited by 120
- 2021Synthesizing Adversarial Negative Responses for Robust Response Ranking and Evaluationcited by 16
- 2024Does Negative Sampling Matter? A Review with Insights into its Theory and Applicationscited by 14
- 2021Are Missing Links Predictable? An Inferential Benchmark for Knowledge Graph Completioncited by 9
- 2024Negative Sampling in Knowledge Graph Representation Learning: A Reviewcited by 9
- 2023Treat Different Negatives Differently: Enriching Loss Functions with Domain and Range Constraints for Link Predictioncited by 3
- 2022Kronecker Decomposition for Knowledge Graph Embeddingscited by 2
- 2023Pre-training Transformers for Knowledge Graph Completioncited by 2
- 2024TWIG: Towards pre-hoc Hyperparameter Optimisation and Cross-Graph Generalisation via Simulated KGE Modelscited by 2
- 2024A Survey on Knowledge Graph Structure and Knowledge Graph Embeddingscited by 2
- 2022Leveraging Wikidata's edit history in knowledge graph refinement taskscited by 1
- 2024Counterfactual Reasoning with Knowledge Graph Embeddingscited by 1
12 most cited of 22 All 22 (JSON)
- 2026HyGRAIL: Cost-Aware and Evidence-Grounded Scientific Hypothesis Discovery over Knowledge Graphs2 Sep 2026
- 2026PyKEEN-NSX: A Modular Framework for Static, Dynamic and Schema-Aware Negative Sampling in PyKEEN31 Aug 2026
- 2026Plausibility-Driven Prioritization of Candidate Biomedical Annotations22 Jul 2026
- 2025Improving Knowledge Graph Embeddings through Contrastive Learning with Negative Statements13 Oct 2025
- 2025Enhancing PyKEEN with Multiple Negative Sampling Solutions for Knowledge Graph Embedding Models7 Aug 2025
- 2025Utilizing Graph Neural Networks for Effective Link Prediction in Microservice Architectures25 Jan 2025
- 2024Extending TWIG: Zero-Shot Predictive Hyperparameter Selection for KGEs based on Graph Structure19 Dec 2024
- 2024A Survey on Knowledge Graph Structure and Knowledge Graph Embeddings13 Dec 2024
- 2024Domain and Range Aware Synthetic Negatives Generation for Knowledge Graph Embedding Models22 Nov 2024
- 2024Counterfactual Reasoning with Knowledge Graph Embeddings11 Mar 2024
- 2024Negative Sampling in Knowledge Graph Representation Learning: A Review29 Feb 2024
- 2024Does Negative Sampling Matter? A Review with Insights into its Theory and Applications27 Feb 2024
12 newest of 22 All 22 (JSON)