Building artificial intelligence virtual tissue (AIVT) for tissue state representation, feature prediction, and dynamic simulation
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Abstract (arXiv)
Modeling tissue states and their transitions is essential for understanding tissue homeostasis in health and pathological remodeling in disease. However, conventional computational modeling approaches are inadequate to capture the complexity of tissues as spatially organized, multiscale biological systems. Artificial intelligence (AI) has shown a remarkable ability for representing intricate systems, creating new opportunities to characterize tissue states and their transitions. Here, we propose the concept of AI virtual tissue (AIVT), an AI framework grounded in spatial multimodal data for modeling tissues in health and disease. AIVT is designed to learn unified, spatially resolved, and dynamically manipulatable representations of tissue state, enabling tissue state representation and analysis, molecular and morphological feature prediction, and simulation of spatiotemporal tissue dynamics. We outline the fundamental assumptions, core capabilities, architectural components, as well as data and algorithm foundations of AIVT as a framework for AI-driven tissue modeling.
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References · 16
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4 more
- 2025HEIST: A Graph Foundation Model for Spatial Transcriptomics and Proteomics Datacited by 7
- 2025AI-powered virtual tissues from spatial proteomics for clinical diagnostics and biomedical discoverycited by 5
- 2026Towards Spatial Transcriptomics-driven Pathology Foundation Modelscited by 2
- 2025AI-driven 3D Spatial Transcriptomicscited by 1
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