mlsanityData to 7 Oct 2026

Applicability Condition Extraction for Therapeutic Drug-Disease Relations

arXiv 2606.14031 ↗First posted 12 Jun 2026cs.AIcited by 0

Not on the map. Why?

Abstract (arXiv)

Identifying conditions that a certain drug takes therapeutic effect on a target disease is crucial for clinical decision-making support. However, most existing biomedical information extraction methods have focused on identifying only relations between drugs and diseases, while largely overlooking the context-specific conditions where such relations can apply. To address this problem, we introduce the task of applicability condition extraction for therapeutic drug-disease relations from biomedical research literature. We create the first dataset that has manually annotated triples of drugs, diseases, and applicability conditions on biomedical paper abstracts with 1,119 drug-disease pairs. Using this dataset, we systematically evaluate the performance of a range of existing methods. In addition, we propose a new method that enhances LoRA to consider relations between drugs and diseases. Our method consistently outperforms strong baselines across different evaluation settings.

Key facts. No citing papers in the map yet (data through 7 Oct 2026). Builds on 17 of its 42 references that are in the map. First posted on arXiv 12 Jun 2026.

Builds on

17 of 42 references.

References · 17

  1. 2018BERT: Pre-training of Deep Bidirectional Transformers for Language Understandingcited by 40,204
  2. 2019RoBERTa: A Robustly Optimized BERT Pretraining Approachcited by 13,266
  3. 2019BioBERT: a pre-trained biomedical language representation model for biomedical text miningcited by 1,935
  4. 2020Domain-Specific Language Model Pretraining for Biomedical Natural Language Processingcited by 996
  5. 2019Publicly Available Clinical BERT Embeddingscited by 995
  6. 2022BioRED: A Rich Biomedical Relation Extraction Datasetcited by 84
  7. 2021A Review of Biomedical Datasets Relating to Drug Discovery: A Knowledge Graph Perspectivecited by 37
  8. 2025Instruction-Tuning LLMs for Event Extraction with Annotation Guidelinescited by 18
  9. 2024Infusing Hierarchical Guidance into Prompt Tuning: A Parameter-Efficient Framework for Multi-level Implicit Discourse Relation Recognitioncited by 11
  10. 2023BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilancecited by 10
  11. 2024RST-LoRA: A Discourse-Aware Low-Rank Adaptation for Long Document Abstractive Summarizationcited by 10
  12. 2022A Distant Supervision Corpus for Extracting Biomedical Relationships Between Chemicals, Diseases and Genescited by 9
5 more
  1. 2024MEDVOC: Vocabulary Adaptation for Fine-tuning Pre-trained Language Models on Medical Text Summarizationcited by 8
  2. 2022Supporting Medical Relation Extraction via Causality-Pruned Semantic Dependency Forestcited by 5
  3. 2018Convolutional neural networks for chemical-disease relation extraction are improved with character-based word embeddingscited by 4
  4. 2024Enhancing Adverse Drug Event Detection with Multimodal Dataset: Corpus Creation and Model Developmentcited by 3
  5. 2025Adverse Event Extraction from Discharge Summaries: A New Dataset, Annotation Scheme, and Initial Findingscited by 2

Built on by

Not cited yet.