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eCREAM-MedCorpus A Large-Scale Corpus of Clinical Notes for Italian

arXiv 2606.12569 ↗First posted 10 Jun 2026cs.CL cs.AIcited by 0

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Abstract (arXiv)

We present eCREAM-MedCorpus, a new and unique large-scale dataset of clinical notes produced in Emergency Departments of Italian hospitals. The corpus, in its current version, is composed of approximately 4 million clinical notes fully anonymized, covering diverse phases of patient care during the stay in the emergency department. In addition, a subset of about six thousand notes has been manually annotated by clinical experts through a structured Case Report Form (CRF) containing 132 items relevant for two patient situations in emergency departments, dyspnea and loss of consciousness. Items may assume numerical values (e.g., for blood saturation), categorical (e.g., for level of consciousness ), binary (e.g., for presence of traumas), and mixed value types. The annotation process involved multiple clinicians and underwent iterative revision to resolve ambiguities in item formulation, resulting in a richly structured (although high imbalanced) resource. The dataset aims to fill a relevant gap of data able to support both the development and the use of Large Language Models in concrete medical applications. We describe the data collection protocol, the on-site anonymisation pipeline, corpus statistics, and the annotation scheme. Finally, we propose CRF-filling as a novel structured information extraction benchmark, and provide zero-shot baseline resulting from Gemma-27B and MedGemma-27B. To the best of our knowledge, eCREAM-MedCorpus is the largest freely available dataset of clinical notes existing for the Italian language.

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References · 10

  1. 2022Large Language Models Encode Clinical Knowledgecited by 1,830
  2. 2022BioGPT: Generative Pre-trained Transformer for Biomedical Text Generation and Miningcited by 538
  3. 2024BioMistral: A Collection of Open-Source Pretrained Large Language Models for Medical Domainscited by 301
  4. 2025m1: Unleash the Potential of Test-Time Scaling for Medical Reasoning with Large Language Modelscited by 46
  5. 2025ReasonMed: A 370K Multi-Agent Generated Dataset for Advancing Medical Reasoningcited by 27
  6. 2025A Modular Approach for Clinical SLMs Driven by Synthetic Data with Pre-Instruction Tuning, Model Merging, and Clinical-Tasks Alignmentcited by 20
  7. 2025Converting Annotated Clinical Cases into Structured Case Report Formscited by 5
  8. 2023Advancing Italian Biomedical Information Extraction with Transformers-based Models: Methodological Insights and Multicenter Practical Applicationcited by 3
  9. 2025Low-resource Information Extraction with the European Clinical Case Corpuscited by 3
  10. 2026Small LLMs for Medical NLP: a Systematic Analysis of Few-Shot, Constraint Decoding, Fine-Tuning and Continual Pre-Training in Italiancited by 3

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