Prune, Interpret, Evaluate: A Cross-Layer Transcoder-Native Framework for Efficient Circuit Discovery via Feature Attribution

Existing feature-interpretation pipelines typically operate on uniformly sampled units or exhaustive feature sets, incurring massive costs on units irrelevant to target behaviors. To address this, we introduce the first CLT-native end-to-end pruning framework, PIE, which pioneers the paradigm of pruning first and interpreting later. PIE connects Pruning, automatic Interpretation, and interpretation Evaluation, establishing a comprehensive benchmarking environment to systematically measure behavioral fidelity and downstream interpretability under pruning. Within this framework, we adapt strong relevance baselines and propose Feature Attribution Patching (FAP), a patch-grounded attribution method that scores CLT features by aggregating gradient-weighted write contributions. Furthermore, we introduce FAP-Synergy, a systematic synergy-aware reranking procedure. We evaluate pruning using KL-divergence behavior retention and assess interpretation quality with FADE-style metrics across IOI and Doc-String datasets. Across budget constraints of K in {50, 100, 200, 400, 800}, our rigorous benchmarking reveals distinct operational regimes: while base FAP and adapted baselines perform robustly at relaxed budgets, FAP-Synergy excels in highly constrained, strict-budget regimes. Crucially, we demonstrate a practical "Effective Budget" advantage: on the IOI task for both Llama-3.2-1B and Gemma-2-2B, FAP-Synergy at K=50 functionally matches the behavioral fidelity of baseline circuits at K=75. Because downstream evaluation costs scale linearly per feature, Synergy effectively grants the pipeline 25 "free" features, achieving K=75 fidelity while reducing interpretation costs by 33%.